getVariantInfo {SSHAARP} | R Documentation |
Locus and allele or motif extraction for motifs, allele, or haplotype mapping
Description
Extracts locus and allele or motif information from variant.
Usage
getVariantInfo(variant)
Arguments
variant |
An amino acid motif or allele. Amino acid motifs must be in the following format: Locus*##$~##$~##$, where ## identifies a peptide position, and $ identifies an amino acid residue. Alleles must have 1-4 fields. |
Value
A list object with loci and allele or motif information.
Note
For internal SSHAARP use only.
[Package SSHAARP version 2.0.5 Index]