Read_Metrics_CellBender {scCustomize} | R Documentation |
Read Overall Statistics from CellBender
Description
Get data.frame with all metrics from the CellBender remove-background
analysis.
Usage
Read_Metrics_CellBender(base_path, lib_list = NULL, lib_names = NULL)
Arguments
base_path |
path to the parent directory which contains all of the sub-directories of interest or path to single metrics csv file. |
lib_list |
a list of sample names (matching directory names) to import. If |
lib_names |
a set of sample names to use for each sample. If |
Value
A data frame with sample metrics from CellBender.
Examples
## Not run:
CB_metrics <- Read_Metrics_CellBender(base_path = "/path/to/directories")
## End(Not run)
[Package scCustomize version 3.0.1 Index]