%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  cequre
%global packver   1.5
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.5
Release:          1%{?dist}%{?buildtag}
Summary:          Censored Quantile Regression & Monotonicity-Respecting Restoring

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.8.0
Requires:         R-core >= 2.8.0

%description
Perform censored quantile regression of Huang (2010)
<doi:10.1214/09-AOS771>, and restore monotonicity respecting via adaptive
interpolation for dynamic regression of Huang (2017)
<doi:10.1080/01621459.2016.1149070>. The monotonicity-respecting
restoration applies to general dynamic regression models including
(uncensored or censored) quantile regression model, additive hazards
model, and dynamic survival models of Peng and Huang (2007)
<doi:10.1093/biomet/asm058>, among others.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}