%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  CPCAT
%global packver   1.0.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.0
Release:          1%{?dist}%{?buildtag}
Summary:          The Closure Principle Computational Approach Test

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildArch:        noarch
BuildRequires:    R-stats 
Requires:         R-stats 

%description
P-values and no/lowest observed (adverse) effect concentration values
derived from the closure principle computational approach test (Lehmann,
R. et al. (2015) <doi:10.1007/s00477-015-1079-4>) are provided. The
package contains functions to generate intersection hypotheses according
to the closure principle (Bretz, F., Hothorn, T., Westfall, P. (2010)
<doi:10.1201/9781420010909>), an implementation of the computational
approach test (Ching-Hui, C., Nabendu, P., Jyh-Jiuan, L. (2010)
<doi:10.1080/03610918.2010.508860>) and the combination of both, that is,
the closure principle computational approach test.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}