supercell_plot_UMAP {SuperCell} | R Documentation |
Plot super-cell UMAP (Use supercell_DimPlot instead) Plots super-cell UMAP (result of supercell_UMAP)
Description
Plot super-cell UMAP (Use supercell_DimPlot instead) Plots super-cell UMAP (result of supercell_UMAP)
Usage
supercell_plot_UMAP(
SC,
groups,
UMAP_name = "SC_UMAP",
color.use = NULL,
asp = 1,
alpha = 0.7,
title = NULL
)
Arguments
SC |
super-cell structure (output of SCimplify) with a field |
groups |
coloring metacells by groups |
UMAP_name |
the mane of the field containing UMAP result |
color.use |
colors of groups |
asp |
plot aspect ratio |
alpha |
transparency of |
title |
title of the plot |
Value
[Package SuperCell version 1.0 Index]