%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  geepack
%global packver   1.3.11.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.3.11.1
Release:          1%{?dist}%{?buildtag}
Summary:          Generalized Estimating Equation Package

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildRequires:    R-methods 
BuildRequires:    R-CRAN-MASS 
BuildRequires:    R-CRAN-broom 
BuildRequires:    R-CRAN-magrittr 
Requires:         R-methods 
Requires:         R-CRAN-MASS 
Requires:         R-CRAN-broom 
Requires:         R-CRAN-magrittr 

%description
Generalized estimating equations solver for parameters in mean, scale, and
correlation structures, through mean link, scale link, and correlation
link. Can also handle clustered categorical responses. See e.g. Halekoh
and Højsgaard, (2005, <doi:10.18637/jss.v015.i02>), for details.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}