get_sqtl_genes {gtexr} | R Documentation |
Get Sqtl Genes
Description
Retrieve sGenes (sQTL Genes).
This service returns sGenes (sQTL Genes) from the specified dataset.
Results may be filtered by tissue.
By default, the service queries the latest GTEx release.
The retrieved data is split into pages with items_per_page
entries per page
GTEx Portal API documentation.
Usage
get_sqtl_genes(
tissueSiteDetailId,
datasetId = "gtex_v8",
page = 0,
itemsPerPage = 250
)
Arguments
tissueSiteDetailId |
String. The ID of the tissue of interest. Can be a
GTEx specific ID (e.g. "Whole_Blood"; use |
datasetId |
String. Unique identifier of a dataset. Usually includes a data source and data release. Options: "gtex_v8", "gtex_snrnaseq_pilot". |
page |
Integer (default = 0). |
itemsPerPage |
Integer (default = 250). |
Value
A tibble.
See Also
Other Static Association Endpoints:
get_eqtl_genes()
,
get_fine_mapping()
,
get_independent_eqtl()
,
get_multi_tissue_eqtls()
,
get_significant_single_tissue_eqtls()
,
get_significant_single_tissue_eqtls_by_location()
,
get_significant_single_tissue_ieqtls()
,
get_significant_single_tissue_isqtls()
,
get_significant_single_tissue_sqtls()
Examples
## Not run:
get_sqtl_genes("Whole_Blood")
## End(Not run)