Reading, Quality Control and Preprocessing of MBA (Multiplex Bead Assay) Data


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Documentation for package ‘PvSTATEM’ version 0.0.4

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create_standard_curve_model_analyte Create a standard curve model for a certain analyte
is_valid_data_type Check validity of given data type
is_valid_sample_type Check validity of given sample type
Model Logistic regression model for the standard curve
Plate Plate object
PlateBuilder PlateBuilder
plot_counts Plot counts in a 96-well plate
plot_layout Plot layout of a 96-well plate
plot_mfi_for_analyte Plot MFI value distribution for a given analyte
plot_standard_curve_analyte Standard curves
plot_standard_curve_analyte_with_model Plot standard curve of a certain analyte with fitted model
predict.Model Predict the dilutions from the MFI values
process_plate Process a plate and save computed dilutions to a CSV
read_intelliflex_format Read the Intelliflex format data
read_layout_data Read layout data from a file
read_luminex_data Read Luminex Data
read_xponent_format Read the xPONENT format data
translate_sample_names_to_sample_types Translate sample names to sample types