%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  odeGUTS
%global packver   1.0.3
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.3
Release:          1%{?dist}%{?buildtag}
Summary:          Solve ODE for GUTS-RED-SD and GUTS-RED-IT Using Compiled Code

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildRequires:    R-CRAN-deSolve 
BuildRequires:    R-CRAN-magrittr 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-zoo 
BuildRequires:    R-CRAN-tidyr 
Requires:         R-CRAN-deSolve 
Requires:         R-CRAN-magrittr 
Requires:         R-stats 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-zoo 
Requires:         R-CRAN-tidyr 

%description
Allows performing forwards prediction for the General Unified Threshold
model of Survival using compiled ode code. This package was created to
avoid dependency with the 'morse' package that requires the installation
of 'JAGS'. This package is based on functions from the 'morse' package
v3.3.1: Virgile Baudrot, Sandrine Charles, Marie Laure Delignette-Muller,
Wandrille Duchemin, Benoit Goussen, Nils Kehrein, Guillaume Kon-Kam-King,
Christelle Lopes, Philippe Ruiz, Alexander Singer and Philippe Veber
(2021) <https://CRAN.R-project.org/package=morse>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}