Hypergeometric.test {NetSci} | R Documentation |
Hypergeometric.test
Description
Calculates the significance of an overlap of two sets using an hypergeometric test. It is a wrapper of the 'phyper' function.
Usage
Hypergeometric.test(
success,
universe_success,
universe_failure,
size_collected,
lower.tail = FALSE
)
Arguments
success |
Is the number of elements in the overlap of the sets. |
universe_success |
Is the number of elements of the set of interest. |
universe_failure |
Is the number of elements of the set of the other set. |
size_collected |
The total of elements in the universe |
lower.tail |
Should the test be calculated on the lower tail? (Hypothesis test is lower than) |
Value
the p-value for the hypergeometric test.
Examples
require(magrittr)
s = 10; S = 15; f = 10; T = 30
Hypergeometric.test(success = s,
universe_success = S,
universe_failure = f,
size_collected = T
)
[Package NetSci version 1.0.1 Index]