downloadOrphanet {Rdiagnosislist} | R Documentation |
Download Orphanet to assist with adding synonyms for rare diseases
Description
Downloads the Orphanet nomenclature pack and converts it into a format to be appended to MANUAL_SYNONYMS and used in concept database creation.
Usage
downloadOrphanet(
orphanet_url =
"https://www.orphadata.com/data/nomenclature/packs/Orphanet_Nomenclature_Pack_EN.zip",
masterfile_name = NULL,
SNOMED = getSNOMED()
)
Arguments
orphanet_url |
URL or filepath to Orphanet zip file |
masterfile_name |
name of xls file containing Orphanet synonyms. If omitted, it is assumed to be the only file with 'MasterFile' in its name, and the program will search for it in the Orphanet zip file. |
SNOMED |
environment containing SNOMED CT dictionary |
Value
data.table containing Orphanet synonyms in the format
References
https://www.orphadata.com/pack-nomenclature/
See Also
downloadWordnet
Examples
# Not run
# ORPHANET <- downloadOrphanet()
[Package Rdiagnosislist version 1.3 Index]