get_matrix_order {metasnf} | R Documentation |
Return the hierarchical clustering order of a matrix
Description
Return the hierarchical clustering order of a matrix
Usage
get_matrix_order(matrix, dist_method = "euclidean", hclust_method = "complete")
Arguments
matrix |
Matrix to cluster. |
dist_method |
Distance method to apply to the matrix. Argument is directly passed into stats::dist. Options include "euclidean", "maximum", "manhattan", "canberra", "binary", or "minkowski". |
hclust_method |
Which agglomerative method to be passed into stats::hclust. Options include "ward.D", "ward.D2", "single", "complete", "average", "mcquitty", "median", or "centroid". |
Value
A numeric vector of the ordering derivied by the specified hierarchical clustering method applied to the provided matrix.
[Package metasnf version 1.1.2 Index]