Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1ce' (ED25519) to the list of known hosts. Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-59oi35rw/R-CRAN-phylolm.hp/R-CRAN-phylolm.hp.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-59oi35rw/R-CRAN-phylolm.hp --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1731549262.356266 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-59oi35rw/R-CRAN-phylolm.hp/R-CRAN-phylolm.hp.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-59oi35rw/R-CRAN-phylolm.hp --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1731549262.356266 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-59oi35rw/R-CRAN-phylolm.hp/R-CRAN-phylolm.hp.spec) Config(fedora-41-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1731549262.356266/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.21.1-1.fc39.noarch python3-dnf-plugins-core-4.9.0-1.fc39.noarch yum-4.21.1-1.fc39.noarch dnf5-5.1.17-2.fc39.x86_64 dnf5-plugins-5.1.17-2.fc39.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 893.0 KiB/s | 29.5 KiB | 00m00s fedora 100% | 743.6 KiB/s | 26.8 KiB | 00m00s Copr repository 100% | 45.2 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 34.4 MiB/s | 12.2 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-1.fc41 fedora 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 fedora 95.7 KiB coreutils x86_64 9.5-10.fc41 fedora 5.6 MiB cpio x86_64 2.15-2.fc41 fedora 1.1 MiB diffutils x86_64 3.10-8.fc41 fedora 1.6 MiB fedora-release-common noarch 41-27 updates 19.6 KiB findutils x86_64 1:4.10.0-4.fc41 fedora 1.8 MiB gawk x86_64 5.3.0-4.fc41 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.40-9.fc41 updates 0.0 B grep x86_64 3.11-9.fc41 fedora 1.0 MiB gzip x86_64 1.13-2.fc41 fedora 389.0 KiB info x86_64 7.1-3.fc41 fedora 361.8 KiB patch x86_64 2.7.6-25.fc41 fedora 266.7 KiB redhat-rpm-config noarch 293-1.fc41 fedora 183.5 KiB rpm-build x86_64 4.20.0-1.fc41 fedora 194.3 KiB sed x86_64 4.9-3.fc41 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-12.fc41 fedora 4.1 MiB tar x86_64 2:1.35-4.fc41 fedora 2.9 MiB unzip x86_64 6.0-64.fc41 fedora 386.8 KiB util-linux x86_64 2.40.2-4.fc41 fedora 3.7 MiB which x86_64 2.21-42.fc41 fedora 80.2 KiB xz x86_64 1:5.6.2-2.fc41 fedora 1.2 MiB Installing dependencies: add-determinism x86_64 0.3.6-1.fc41 fedora 2.2 MiB alternatives x86_64 1.30-1.fc41 fedora 66.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.2-1.fc41 fedora 331.3 KiB authselect x86_64 1.5.0-8.fc41 fedora 157.6 KiB authselect-libs x86_64 1.5.0-8.fc41 fedora 822.2 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils x86_64 2.43.1-2.fc41 fedora 27.5 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B bzip2-libs x86_64 1.0.8-19.fc41 fedora 80.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc41 fedora 2.4 MiB coreutils-common x86_64 9.5-10.fc41 fedora 11.2 MiB cracklib x86_64 2.9.11-6.fc41 fedora 238.9 KiB crypto-policies noarch 20241029-1.git8baf557.fc41 updates 136.9 KiB curl x86_64 8.9.1-2.fc41 fedora 796.2 KiB cyrus-sasl-lib x86_64 2.1.28-27.fc41 fedora 2.3 MiB debugedit x86_64 5.1-1.fc41 updates 199.8 KiB dwz x86_64 0.15-8.fc41 fedora 298.9 KiB ed x86_64 1.20.2-2.fc41 fedora 146.9 KiB efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB elfutils x86_64 0.192-5.fc41 updates 2.7 MiB elfutils-debuginfod-client x86_64 0.192-5.fc41 updates 84.2 KiB elfutils-default-yama-scope noarch 0.192-5.fc41 updates 1.8 KiB elfutils-libelf x86_64 0.192-5.fc41 updates 1.2 MiB elfutils-libs x86_64 0.192-5.fc41 updates 666.3 KiB fedora-gpg-keys noarch 41-1 fedora 126.4 KiB fedora-release noarch 41-27 updates 0.0 B fedora-release-identity-basic noarch 41-27 updates 682.0 B fedora-repos noarch 41-1 fedora 4.9 KiB file x86_64 5.45-7.fc41 fedora 103.5 KiB file-libs x86_64 5.45-7.fc41 fedora 9.9 MiB filesystem x86_64 3.18-23.fc41 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.3.2-1.fc41 fedora 39.0 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal x86_64 15.2-2.fc41 updates 13.0 MiB gdbm x86_64 1:1.23-7.fc41 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-7.fc41 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.1-2.fc41 fedora 747.0 B glibc x86_64 2.40-9.fc41 updates 6.7 MiB glibc-common x86_64 2.40-9.fc41 updates 1.0 MiB glibc-gconv-extra x86_64 2.40-9.fc41 updates 8.0 MiB gmp x86_64 1:6.3.0-2.fc41 fedora 811.4 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-10.fc41 fedora 88.3 KiB json-c x86_64 0.17-4.fc41 fedora 82.4 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-4.fc41 fedora 54.4 KiB krb5-libs x86_64 1.21.3-3.fc41 updates 2.3 MiB libacl x86_64 2.3.2-2.fc41 fedora 40.0 KiB libarchive x86_64 3.7.4-4.fc41 updates 926.6 KiB libattr x86_64 2.5.2-4.fc41 fedora 28.5 KiB libblkid x86_64 2.40.2-4.fc41 fedora 258.5 KiB libbrotli x86_64 1.1.0-5.fc41 fedora 837.6 KiB libcap x86_64 2.70-4.fc41 fedora 220.2 KiB libcap-ng x86_64 0.8.5-3.fc41 fedora 69.2 KiB libcom_err x86_64 1.47.1-6.fc41 fedora 67.2 KiB libcurl x86_64 8.9.1-2.fc41 fedora 818.1 KiB libeconf x86_64 0.6.2-3.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-14.fc41 fedora 895.7 KiB libfdisk x86_64 2.40.2-4.fc41 fedora 362.9 KiB libffi x86_64 3.4.6-3.fc41 fedora 86.4 KiB libgcc x86_64 14.2.1-3.fc41 fedora 274.6 KiB libgomp x86_64 14.2.1-3.fc41 fedora 523.5 KiB libidn2 x86_64 2.3.7-2.fc41 fedora 329.1 KiB libmount x86_64 2.40.2-4.fc41 fedora 351.8 KiB libnghttp2 x86_64 1.62.1-2.fc41 fedora 166.1 KiB libnsl2 x86_64 2.0.1-2.fc41 fedora 57.9 KiB libpkgconf x86_64 2.3.0-1.fc41 fedora 78.2 KiB libpsl x86_64 0.21.5-4.fc41 fedora 80.5 KiB libpwquality x86_64 1.4.5-11.fc41 fedora 417.8 KiB libselinux x86_64 3.7-5.fc41 fedora 181.0 KiB libsemanage x86_64 3.7-2.fc41 fedora 293.5 KiB libsepol x86_64 3.7-2.fc41 fedora 817.8 KiB libsmartcols x86_64 2.40.2-4.fc41 fedora 180.4 KiB libssh x86_64 0.10.6-8.fc41 fedora 513.3 KiB libssh-config noarch 0.10.6-8.fc41 fedora 277.0 B libstdc++ x86_64 14.2.1-3.fc41 fedora 2.8 MiB libtasn1 x86_64 4.19.0-9.fc41 fedora 175.7 KiB libtirpc x86_64 1.3.6-0.fc41 updates 202.7 KiB libtool-ltdl x86_64 2.4.7-12.fc41 fedora 66.2 KiB libunistring x86_64 1.1-8.fc41 fedora 1.7 MiB libutempter x86_64 1.2.1-15.fc41 fedora 57.7 KiB libuuid x86_64 2.40.2-4.fc41 fedora 37.5 KiB libverto x86_64 0.3.2-9.fc41 fedora 29.5 KiB libxcrypt x86_64 4.4.36-10.fc41 updates 271.4 KiB libxml2 x86_64 2.12.8-2.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-2.fc41 fedora 795.9 KiB lua-libs x86_64 5.4.6-6.fc41 fedora 285.0 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs x86_64 1.10.0-1.fc41 fedora 145.5 KiB mpfr x86_64 4.2.1-5.fc41 fedora 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 fedora 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap x86_64 2.6.8-5.fc41 fedora 644.2 KiB openssl-libs x86_64 1:3.2.2-9.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 fedora 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam x86_64 1.6.1-6.fc41 updates 1.8 MiB pam-libs x86_64 1.6.1-6.fc41 updates 139.0 KiB pcre2 x86_64 10.44-1.fc41.1 fedora 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf x86_64 2.3.0-1.fc41 fedora 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc41 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc41 fedora 989.0 B popt x86_64 1.19-7.fc41 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.0-1.fc41 updates 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc41 fedora 500.0 B qt6-srpm-macros noarch 6.8.0-1.fc41 updates 456.0 B readline x86_64 8.2-10.fc41 fedora 493.2 KiB rpm x86_64 4.20.0-1.fc41 fedora 3.1 MiB rpm-build-libs x86_64 4.20.0-1.fc41 fedora 206.7 KiB rpm-libs x86_64 4.20.0-1.fc41 fedora 725.9 KiB rpm-sequoia x86_64 1.7.0-2.fc41 fedora 2.4 MiB rust-srpm-macros noarch 26.3-3.fc41 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc41 fedora 1.4 MiB systemd-libs x86_64 256.7-1.fc41 fedora 2.0 MiB util-linux-core x86_64 2.40.2-4.fc41 fedora 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc41 fedora 88.4 KiB xz-libs x86_64 1:5.6.2-2.fc41 fedora 214.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip x86_64 3.0-41.fc41 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc41 fedora 134.0 KiB zstd x86_64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation 181 MiB will be used (install 181 MiB, remove 0 B). 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post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.x86_64 >>> Stop post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.x86_64 [ 72/156] Installing zstd-0:1.5.6-2.fc4 100% | 241.6 MiB/s | 1.7 MiB | 00m00s [ 73/156] Installing util-linux-core-0: 100% | 123.8 MiB/s | 1.5 MiB | 00m00s [ 74/156] Installing tar-2:1.35-4.fc41. 100% | 227.6 MiB/s | 3.0 MiB | 00m00s [ 75/156] Installing libsemanage-0:3.7- 100% | 96.1 MiB/s | 295.2 KiB | 00m00s [ 76/156] Installing shadow-utils-2:4.1 100% | 88.6 MiB/s | 4.2 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-15.fc41.x86_64 >>> Stop pre-install scriptlet: libutempter-0:1.2.1-15.fc41.x86_64 [ 77/156] Installing libutempter-0:1.2. 100% | 29.2 MiB/s | 59.7 KiB | 00m00s [ 78/156] Installing zip-0:3.0-41.fc41. 100% | 172.6 MiB/s | 707.1 KiB | 00m00s [ 79/156] Installing gdbm-1:1.23-7.fc41 100% | 113.7 MiB/s | 465.8 KiB | 00m00s [ 80/156] Installing cyrus-sasl-lib-0:2 100% | 230.6 MiB/s | 2.3 MiB | 00m00s [ 81/156] Installing 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[ 92/156] Installing libgomp-0:14.2.1-3 100% | 256.2 MiB/s | 524.8 KiB | 00m00s [ 93/156] Installing json-c-0:0.17-4.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s [ 94/156] Installing jansson-0:2.13.1-1 100% | 87.6 MiB/s | 89.7 KiB | 00m00s [ 95/156] Installing libpkgconf-0:2.3.0 100% | 77.5 MiB/s | 79.3 KiB | 00m00s [ 96/156] Installing pkgconf-0:2.3.0-1. 100% | 44.5 MiB/s | 91.1 KiB | 00m00s [ 97/156] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [ 98/156] Installing keyutils-libs-0:1. 100% | 54.5 MiB/s | 55.8 KiB | 00m00s [ 99/156] Installing libverto-0:0.3.2-9 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [100/156] Installing xxhash-libs-0:0.8. 100% | 87.7 MiB/s | 89.8 KiB | 00m00s [101/156] Installing libbrotli-0:1.1.0- 100% | 205.0 MiB/s | 839.9 KiB | 00m00s [102/156] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB | 00m00s [103/156] Installing libtool-ltdl-0:2.4 100% | 65.7 MiB/s | 67.3 KiB | 00m00s [104/156] Installing coreutils-common-0 100% | 260.2 MiB/s | 11.2 MiB | 00m00s [105/156] Installing openssl-libs-1:3.2 100% | 326.2 MiB/s | 7.8 MiB | 00m00s [106/156] Installing coreutils-0:9.5-10 100% | 157.2 MiB/s | 5.7 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc41 >>> Stop pre-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc41.no [107/156] Installing ca-certificates-0: 100% | 2.5 MiB/s | 2.4 MiB | 00m01s >>> Running post-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc4 >>> Stop post-install scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc41.n [108/156] Installing krb5-libs-0:1.21.3 100% | 178.4 MiB/s | 2.3 MiB | 00m00s [109/156] Installing libarchive-0:3.7.4 100% | 181.4 MiB/s | 928.6 KiB | 00m00s [110/156] Installing libtirpc-0:1.3.6-0 100% | 99.8 MiB/s | 204.5 KiB | 00m00s [111/156] Installing gzip-0:1.13-2.fc41 100% | 96.3 MiB/s | 394.6 KiB | 00m00s [112/156] Installing authselect-libs-0: 100% | 90.8 MiB/s | 837.2 KiB | 00m00s [113/156] Installing cracklib-0:2.9.11- 100% | 30.6 MiB/s | 250.3 KiB | 00m00s [114/156] Installing libpwquality-0:1.4 100% | 52.5 MiB/s | 430.1 KiB | 00m00s [115/156] Installing libnsl2-0:2.0.1-2. 100% | 28.8 MiB/s | 59.1 KiB | 00m00s [116/156] Installing pam-0:1.6.1-6.fc41 100% | 78.2 MiB/s | 1.9 MiB | 00m00s [117/156] Installing libssh-0:0.10.6-8. 100% | 167.8 MiB/s | 515.4 KiB | 00m00s [118/156] Installing rpm-sequoia-0:1.7. 100% | 295.9 MiB/s | 2.4 MiB | 00m00s [119/156] Installing rpm-libs-0:4.20.0- 100% | 177.6 MiB/s | 727.4 KiB | 00m00s [120/156] Installing libevent-0:2.1.12- 100% | 175.7 MiB/s | 899.5 KiB | 00m00s [121/156] Installing openldap-0:2.6.8-5 100% | 158.2 MiB/s | 648.0 KiB | 00m00s [122/156] Installing libcurl-0:8.9.1-2. 100% | 200.0 MiB/s | 819.2 KiB | 00m00s [123/156] Installing elfutils-debuginfo 100% | 42.1 MiB/s | 86.3 KiB | 00m00s [124/156] Installing elfutils-libs-0:0. 100% | 163.1 MiB/s | 668.0 KiB | 00m00s [125/156] Installing elfutils-0:0.192-5 100% | 243.2 MiB/s | 2.7 MiB | 00m00s [126/156] Installing binutils-0:2.43.1- 100% | 283.8 MiB/s | 27.5 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.43.1-2.fc41.x86_64 >>> Stop post-install scriptlet: binutils-0:2.43.1-2.fc41.x86_64 [127/156] Installing gdb-minimal-0:15.2 100% | 309.3 MiB/s | 13.0 MiB | 00m00s [128/156] Installing debugedit-0:5.1-1. 100% | 98.9 MiB/s | 202.5 KiB | 00m00s [129/156] Installing rpm-build-libs-0:4 100% | 101.3 MiB/s | 207.5 KiB | 00m00s [130/156] Installing curl-0:8.9.1-2.fc4 100% | 41.0 MiB/s | 798.6 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.20.0-1.fc41.x86_64 >>> Stop pre-install scriptlet: rpm-0:4.20.0-1.fc41.x86_64 [131/156] Installing rpm-0:4.20.0-1.fc4 100% | 89.5 MiB/s | 2.5 MiB | 00m00s [132/156] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [133/156] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [134/156] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [135/156] Installing rust-srpm-macros-0 100% | 5.4 MiB/s | 5.6 KiB | 00m00s [136/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [137/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [138/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [139/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [140/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [141/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [142/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [143/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [144/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/156] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [146/156] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [147/156] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s [148/156] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [149/156] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [150/156] Installing redhat-rpm-config- 100% | 46.4 MiB/s | 190.1 KiB | 00m00s [151/156] Installing rpm-build-0:4.20.0 100% | 49.5 MiB/s | 202.8 KiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 93.7 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.2-4.fc41.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40.2-4.fc41.x86_64 [154/156] Installing authselect-0:1.5.0 100% | 39.5 MiB/s | 161.9 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 40.2 MiB/s | 82.4 KiB | 00m00s [156/156] Installing info-0:7.1-3.fc41. 100% | 284.7 KiB/s | 362.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0 >>> Stop post-transaction scriptlet: ca-certificates-0:2024.2.69_v8.0.401-1.0.fc >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-8.fc41.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-8.fc41.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.20.0-1.fc41.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.20.0-1.fc41.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.40-9.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.40-9.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc41.x86_64 authselect-libs-1.5.0-8.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-1.fc41.x86_64 binutils-2.43.1-2.fc41.x86_64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch coreutils-9.5-10.fc41.x86_64 coreutils-common-9.5-10.fc41.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241029-1.git8baf557.fc41.noarch curl-8.9.1-2.fc41.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.1-1.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.192-5.fc41.x86_64 elfutils-debuginfod-client-0.192-5.fc41.x86_64 elfutils-default-yama-scope-0.192-5.fc41.noarch elfutils-libelf-0.192-5.fc41.x86_64 elfutils-libs-0.192-5.fc41.x86_64 fedora-gpg-keys-41-1.noarch fedora-release-41-27.noarch fedora-release-common-41-27.noarch fedora-release-identity-basic-41-27.noarch fedora-repos-41-1.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.3.2-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.2-2.fc41.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-9.fc41.x86_64 glibc-common-2.40-9.fc41.x86_64 glibc-gconv-extra-2.40-9.fc41.x86_64 glibc-minimal-langpack-2.40-9.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 json-c-0.17-4.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-3.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-4.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-4.fc41.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-6.fc41.x86_64 libcurl-8.9.1-2.fc41.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-4.fc41.x86_64 libffi-3.4.6-3.fc41.x86_64 libgcc-14.2.1-3.fc41.x86_64 libgomp-14.2.1-3.fc41.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-4.fc41.x86_64 libnghttp2-1.62.1-2.fc41.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc41.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-5.fc41.x86_64 libsemanage-3.7-2.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-4.fc41.x86_64 libssh-0.10.6-8.fc41.x86_64 libssh-config-0.10.6-8.fc41.noarch libstdc++-14.2.1-3.fc41.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.6-0.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libutempter-1.2.1-15.fc41.x86_64 libuuid-2.40.2-4.fc41.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-10.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-9.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc41.x86_64 pam-libs-1.6.1-6.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc41.x86_64 pkgconf-m4-2.3.0-1.fc41.noarch pkgconf-pkg-config-2.3.0-1.fc41.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.0-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc41.noarch qt6-srpm-macros-6.8.0-1.fc41.noarch readline-8.2-10.fc41.x86_64 redhat-rpm-config-293-1.fc41.noarch rpm-4.20.0-1.fc41.x86_64 rpm-build-4.20.0-1.fc41.x86_64 rpm-build-libs-4.20.0-1.fc41.x86_64 rpm-libs-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc41.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-12.fc41.x86_64 sqlite-libs-3.46.1-1.fc41.x86_64 systemd-libs-256.7-1.fc41.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-4.fc41.x86_64 util-linux-core-2.40.2-4.fc41.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc41.x86_64 xz-5.6.2-2.fc41.x86_64 xz-libs-5.6.2-2.fc41.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1731549262.356266/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-59oi35rw/R-CRAN-phylolm.hp/R-CRAN-phylolm.hp.spec) Config(child) 0 minutes 14 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm) Config(fedora-41-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1731549262.356266/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.21.1-1.fc39.noarch python3-dnf-plugins-core-4.9.0-1.fc39.noarch yum-4.21.1-1.fc39.noarch dnf5-5.1.17-2.fc39.x86_64 dnf5-plugins-5.1.17-2.fc39.x86_64 Finish: chroot init Start: build phase for R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm Start: build setup for R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Updating and loading repositories: updates 100% | 1.0 MiB/s | 29.5 KiB | 00m00s fedora 100% | 956.0 KiB/s | 26.8 KiB | 00m00s Copr repository 100% | 41.5 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 41.1 MiB/s | 12.2 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-CRAN-ggplot2 noarch 3.5.1-1.fc41.copr7361224 copr_base 7.1 MiB R-CRAN-phylolm x86_64 2.6.5-1.fc41.copr8099365 copr_base 633.9 KiB R-CRAN-rr2 noarch 1.1.1-1.fc41.copr7370353 copr_base 171.5 KiB R-CRAN-vegan x86_64 2.6.8-1.fc41.copr7951522 copr_base 4.7 MiB R-devel x86_64 4.4.2-1.fc41 updates 0.0 B Installing dependencies: R-CRAN-MASS x86_64 7.3.61-1.fc41.copr7613806 copr_base 1.8 MiB R-CRAN-Matrix x86_64 1.7.1-1.fc41.copr8157422 copr_base 8.2 MiB R-CRAN-R6 noarch 2.5.1-1.fc41.copr7349938 copr_base 115.9 KiB R-CRAN-RColorBrewer noarch 1.1.3-1.fc41.copr7349948 copr_base 63.6 KiB R-CRAN-Rcpp x86_64 1.0.13.1-1.fc41.copr8204071 copr_base 8.4 MiB R-CRAN-ape x86_64 5.8-1.fc41.copr7356134 copr_base 4.3 MiB R-CRAN-boot noarch 1.3.31-1.fc41.copr7951483 copr_base 1.1 MiB R-CRAN-cli x86_64 3.6.3-1.fc41.copr7649835 copr_base 2.4 MiB R-CRAN-cluster x86_64 2.1.6-1.fc41.copr7352635 copr_base 996.2 KiB R-CRAN-codetools noarch 0.2.20-1.fc41.copr7352636 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R-CRAN-viridisLite noarch 0.4.2-1.fc41.copr7349928 copr_base 1.3 MiB R-CRAN-withr noarch 3.0.2-1.fc41.copr8184963 copr_base 396.0 KiB R-core x86_64 4.4.2-1.fc41 updates 101.6 MiB R-core-devel x86_64 4.4.2-1.fc41 updates 395.8 KiB R-java x86_64 4.4.2-1.fc41 updates 0.0 B R-java-devel x86_64 4.4.2-1.fc41 updates 0.0 B R-littler x86_64 0.3.19-5.fc41 fedora 158.1 KiB R-rpm-macros noarch 1.2.1-11.fc41 fedora 5.6 KiB abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB alsa-lib x86_64 1.2.12-2.fc41 fedora 1.4 MiB annobin-docs noarch 12.69-1.fc41 fedora 97.7 KiB annobin-plugin-gcc x86_64 12.69-1.fc41 fedora 985.0 KiB avahi-libs x86_64 0.8-29.fc41 fedora 166.3 KiB brotli x86_64 1.1.0-5.fc41 fedora 31.8 KiB brotli-devel x86_64 1.1.0-5.fc41 fedora 65.6 KiB bzip2-devel x86_64 1.0.8-19.fc41 fedora 309.8 KiB cairo x86_64 1.18.0-4.fc41 fedora 1.7 MiB cairo-devel x86_64 1.18.0-4.fc41 fedora 2.3 MiB cmake-filesystem x86_64 3.30.5-1.fc41 updates 0.0 B copy-jdk-configs noarch 4.1-6.fc41 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KiB java-21-openjdk x86_64 1:21.0.5.0.11-1.fc41 updates 1.1 MiB java-21-openjdk-devel x86_64 1:21.0.5.0.11-1.fc41 updates 11.2 MiB java-21-openjdk-headless x86_64 1:21.0.5.0.11-1.fc41 updates 203.9 MiB javapackages-filesystem noarch 6.2.0-14.fc41 fedora 1.9 KiB jbigkit-libs x86_64 2.1-30.fc41 fedora 117.6 KiB kernel-headers x86_64 6.11.3-300.fc41 fedora 6.4 MiB less x86_64 661-2.fc41 fedora 405.3 KiB libICE x86_64 1.1.1-4.fc41 fedora 181.2 KiB libRmath x86_64 4.4.2-1.fc41 updates 250.8 KiB libRmath-devel x86_64 4.4.2-1.fc41 updates 17.4 KiB libSM x86_64 1.2.4-4.fc41 fedora 97.3 KiB libX11 x86_64 1.8.10-2.fc41 fedora 1.3 MiB libX11-common noarch 1.8.10-2.fc41 fedora 1.1 MiB libX11-devel x86_64 1.8.10-2.fc41 fedora 1.0 MiB libX11-xcb x86_64 1.8.10-2.fc41 fedora 15.0 KiB libXau x86_64 1.0.11-7.fc41 fedora 66.9 KiB libXau-devel x86_64 1.0.11-7.fc41 fedora 6.4 KiB libXcomposite x86_64 0.4.6-4.fc41 fedora 44.5 KiB libXext x86_64 1.3.6-2.fc41 fedora 90.1 KiB libXext-devel x86_64 1.3.6-2.fc41 fedora 98.9 KiB libXft x86_64 2.3.8-7.fc41 fedora 164.5 KiB libXft-devel x86_64 2.3.8-7.fc41 fedora 31.7 KiB libXi x86_64 1.8.2-1.fc41 fedora 76.7 KiB libXmu x86_64 1.2.1-2.fc41 fedora 191.5 KiB libXrender x86_64 0.9.11-7.fc41 fedora 50.1 KiB libXrender-devel x86_64 0.9.11-7.fc41 fedora 50.1 KiB libXt x86_64 1.3.0-4.fc41 fedora 429.9 KiB libXtst x86_64 1.2.5-1.fc41 fedora 33.6 KiB libb2 x86_64 0.98.1-12.fc41 fedora 42.2 KiB libblkid-devel x86_64 2.40.2-4.fc41 fedora 44.9 KiB libdatrie x86_64 0.2.13-10.fc41 fedora 57.9 KiB libdeflate x86_64 1.22-2.fc41 fedora 118.1 KiB libdeflate-devel x86_64 1.22-2.fc41 fedora 25.7 KiB libffi-devel x86_64 3.4.6-3.fc41 fedora 33.1 KiB libfontenc x86_64 1.1.8-2.fc41 fedora 67.0 KiB libgfortran x86_64 14.2.1-3.fc41 fedora 3.0 MiB libicu x86_64 74.2-2.fc41 fedora 34.9 MiB libicu-devel x86_64 74.2-2.fc41 fedora 5.6 MiB libjpeg-turbo x86_64 3.0.2-3.fc41 fedora 776.9 KiB liblerc x86_64 4.0.0-7.fc41 fedora 607.5 KiB libmount-devel x86_64 2.40.2-4.fc41 fedora 63.5 KiB libmpc x86_64 1.3.1-6.fc41 fedora 164.7 KiB libpng x86_64 2:1.6.40-4.fc41 fedora 245.8 KiB libpng-devel x86_64 2:1.6.40-4.fc41 fedora 881.5 KiB libquadmath x86_64 14.2.1-3.fc41 fedora 325.9 KiB libquadmath-devel x86_64 14.2.1-3.fc41 fedora 21.9 KiB libselinux-devel x86_64 3.7-5.fc41 fedora 126.4 KiB libsepol-devel x86_64 3.7-2.fc41 fedora 120.3 KiB libstdc++-devel x86_64 14.2.1-3.fc41 fedora 15.4 MiB libtextstyle x86_64 0.22.5-6.fc41 fedora 195.6 KiB libthai x86_64 0.1.29-9.fc41 fedora 783.5 KiB libtiff x86_64 4.6.0-6.fc41 fedora 606.0 KiB libtirpc-devel x86_64 1.3.6-0.fc41 updates 251.6 KiB libwebp x86_64 1.4.0-4.fc41 fedora 822.6 KiB libxcb x86_64 1.17.0-3.fc41 fedora 1.2 MiB libxcb-devel x86_64 1.17.0-3.fc41 fedora 2.7 MiB libxcrypt-devel x86_64 4.4.36-10.fc41 updates 30.5 KiB libxml2-devel x86_64 2.12.8-2.fc41 fedora 3.4 MiB lksctp-tools x86_64 1.0.19-9.fc41 fedora 275.2 KiB lua x86_64 5.4.6-6.fc41 fedora 601.7 KiB lua-posix x86_64 36.2.1-7.fc41 fedora 599.8 KiB make x86_64 1:4.4.1-8.fc41 fedora 1.8 MiB mkfontscale x86_64 1.2.3-1.fc41 fedora 49.2 KiB mpdecimal x86_64 2.5.1-16.fc41 fedora 204.9 KiB nettle x86_64 3.10-3.fc41 fedora 793.0 KiB nspr x86_64 4.35.0-30.fc41 updates 320.4 KiB nss x86_64 3.105.0-1.fc41 updates 1.9 MiB nss-softokn x86_64 3.105.0-1.fc41 updates 1.9 MiB nss-softokn-freebl x86_64 3.105.0-1.fc41 updates 845.1 KiB nss-sysinit x86_64 3.105.0-1.fc41 updates 22.2 KiB nss-util x86_64 3.105.0-1.fc41 updates 205.1 KiB openblas x86_64 0.3.26-5.fc41 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-5.fc41 fedora 39.4 MiB openblas-openmp64 x86_64 0.3.26-5.fc41 fedora 39.5 MiB pango x86_64 1.54.0-2.fc41 fedora 996.2 KiB pcre2-devel x86_64 10.44-1.fc41.1 fedora 2.0 MiB pcre2-utf16 x86_64 10.44-1.fc41.1 fedora 590.1 KiB pcre2-utf32 x86_64 10.44-1.fc41.1 fedora 562.0 KiB pixman x86_64 0.44.0-0.fc41 updates 674.1 KiB pixman-devel x86_64 0.44.0-0.fc41 updates 49.4 KiB python-pip-wheel noarch 24.2-1.fc41 fedora 1.2 MiB python3 x86_64 3.13.0-1.fc41 fedora 31.8 KiB python3-libs x86_64 3.13.0-1.fc41 fedora 40.3 MiB python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB sysprof-capture-devel x86_64 47.0-1.fc41 fedora 252.8 KiB tcl x86_64 1:8.6.14-2.fc41 fedora 4.2 MiB tcl-devel x86_64 1:8.6.14-2.fc41 fedora 791.3 KiB tk x86_64 1:8.6.14-2.fc41 fedora 3.6 MiB tk-devel x86_64 1:8.6.14-2.fc41 fedora 984.9 KiB tre x86_64 0.8.0-45.20140228gitc2f5d13.fc41 fedora 75.9 KiB tre-common noarch 0.8.0-45.20140228gitc2f5d13.fc41 fedora 81.0 KiB tre-devel x86_64 0.8.0-45.20140228gitc2f5d13.fc41 fedora 10.7 KiB ttmkfdir x86_64 3.0.9-71.fc41 fedora 122.7 KiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB tzdata-java noarch 2024a-9.fc41 fedora 101.7 KiB xdg-utils noarch 1.2.1-2.fc41 fedora 346.3 KiB xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-39.fc41 fedora 863.3 KiB xorg-x11-proto-devel noarch 2024.1-3.fc41 fedora 1.7 MiB xz-devel x86_64 1:5.6.2-2.fc41 fedora 255.6 KiB zlib-ng-compat-devel x86_64 2.1.7-3.fc41 fedora 106.8 KiB Transaction Summary: Installing: 220 packages Total size of inbound packages is 333 MiB. Need to download 44 MiB. After this operation 968 MiB will be used (install 968 MiB, remove 0 B). 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post-transaction scriptlet: java-21-openjdk-headless-1:21.0.5.0.11-1.fc >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-1:21.0.5.0.11-1.fc41.x86 >>> Stop post-transaction scriptlet: java-21-openjdk-1:21.0.5.0.11-1.fc41.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-devel-1:21.0.5.0.11-1.fc >>> Stop post-transaction scriptlet: java-21-openjdk-devel-1:21.0.5.0.11-1.fc41. >>> Running trigger-install scriptlet: glibc-common-0:2.40-9.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.40-9.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.82.2-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.82.2-1.fc41.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.82.2-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.82.2-1.fc41.x86_64 >>> Running trigger-install scriptlet: desktop-file-utils-0:0.27-2.fc41.x86_64 >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.27-2.fc41.x86_64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64 Warning: skipped PGP checks for 61 package(s). Finish: build setup for R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm Start: rpmbuild R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.yLY9Hk + umask 022 + cd /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + test -d /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + /usr/bin/rm -rf /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Rr29HN + umask 022 + cd /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + cd /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + rm -rf phylolm.hp + /usr/bin/mkdir -p phylolm.hp + cd phylolm.hp + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/phylolm.hp_0.0-1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d phylolm.hp/src ']' + true + '[' -d phylolm.hp/src ']' + true + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.utRVub + umask 022 + cd /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd phylolm.hp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.2fIGvs + umask 022 + cd /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + '[' /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + mkdir /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd phylolm.hp + mkdir -p /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT/usr/local/lib/R/library phylolm.hp * installing *source* package ‘phylolm.hp’ ... ** package ‘phylolm.hp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘phylolm.hp’ finding HTML links ... done creatbin html genList html odd html phyloglm.hp html phylolm.hp html plot.phyloglmhp html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phylolm.hp) + test -d phylolm.hp/src + rm -f /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT/usr/local/lib/R/library/R.css + find /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT@@g '{}' ';' + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT Scanned 11 directories and 32 files, processed 13 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Processing files: R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.noarch Provides: R-CRAN-phylolm.hp = 0.0.1-1.fc41.copr8256717 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build/BUILDROOT Wrote: /builddir/build/RPMS/R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.AjaJhb + umask 022 + cd /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + test -d /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + rm -rf /builddir/build/BUILD/R-CRAN-phylolm.hp-0.0.1-build + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm Finish: build phase for R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1731549262.356266/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-phylolm.hp-0.0.1-1.fc41.copr8256717.src.rpm) Config(child) 0 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-phylolm.hp", "epoch": null, "version": "0.0.1", "release": "1.fc41.copr8256717", "arch": "noarch" }, { "name": "R-CRAN-phylolm.hp", "epoch": null, "version": "0.0.1", "release": "1.fc41.copr8256717", "arch": "src" } ] } RPMResults finished