motif_seq {BioVizSeq}R Documentation

motif_seq

Description

Get motif sequence from meme file or mast file

Usage

motif_seq(meme_file)

Arguments

meme_file

The path of meme file or mast file.

Value

data.frame

Author(s)

Shiqi Zhao

Examples

meme_path <- system.file("extdata", "meme.xml", package = "BioVizSeq")
meme_file <- readLines(meme_path)
motifseq<- motif_seq(meme_file)

mast_path <- system.file("extdata", "mast.xml", package = "BioVizSeq")
mast_file <- readLines(mast_path)
motifseq<- motif_seq(mast_file)


[Package BioVizSeq version 0.1.0 Index]