Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c198' (ED25519) to the list of known hosts. stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading clustur_0.1.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o clustur_0.1.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-clustur/clustur_0.1.1.tar.gz/md5/19b97033c091b659fbcc046f252ff3aa/clustur_0.1.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 235k 100 235k 0 0 3773k 0 --:--:-- --:--:-- --:--:-- 3791k INFO: Reading stdout from command: md5sum clustur_0.1.1.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iy21xocb/R-CRAN-clustur/R-CRAN-clustur.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iy21xocb/R-CRAN-clustur --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732585644.956362 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iy21xocb/R-CRAN-clustur/R-CRAN-clustur.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iy21xocb/R-CRAN-clustur --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732585644.956362 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-iy21xocb/R-CRAN-clustur/R-CRAN-clustur.spec) Config(fedora-41-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1732585644.956362/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 python3-dnf-4.22.0-1.fc41.noarch python3-dnf-plugins-core-4.10.0-1.fc41.noarch dnf5-5.2.7.0-1.fc41.x86_64 dnf5-plugins-5.2.7.0-1.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 2.6 MiB/s | 6.0 MiB | 00m02s fedora 100% | 11.2 MiB/s | 35.4 MiB | 00m03s Copr repository 100% | 6.4 MiB/s | 12.2 MiB | 00m02s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-1.fc41 fedora 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 fedora 95.7 KiB coreutils x86_64 9.5-11.fc41 updates 5.7 MiB cpio x86_64 2.15-2.fc41 fedora 1.1 MiB diffutils x86_64 3.10-8.fc41 fedora 1.6 MiB fedora-release-common noarch 41-28 updates 19.7 KiB findutils x86_64 1:4.10.0-4.fc41 fedora 1.8 MiB gawk x86_64 5.3.0-4.fc41 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.40-12.fc41 updates 0.0 B grep x86_64 3.11-9.fc41 fedora 1.0 MiB gzip x86_64 1.13-2.fc41 fedora 389.0 KiB info x86_64 7.1-3.fc41 fedora 361.8 KiB patch x86_64 2.7.6-25.fc41 fedora 266.7 KiB redhat-rpm-config noarch 293-1.fc41 fedora 183.5 KiB rpm-build x86_64 4.20.0-1.fc41 fedora 194.3 KiB sed x86_64 4.9-3.fc41 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-12.fc41 fedora 4.1 MiB tar x86_64 2:1.35-4.fc41 fedora 2.9 MiB unzip x86_64 6.0-64.fc41 fedora 386.8 KiB util-linux x86_64 2.40.2-4.fc41 fedora 3.7 MiB which x86_64 2.21-42.fc41 fedora 80.2 KiB xz x86_64 1:5.6.2-2.fc41 fedora 1.2 MiB Installing dependencies: add-determinism x86_64 0.3.6-3.fc41 updates 2.4 MiB alternatives x86_64 1.30-1.fc41 fedora 66.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.2-1.fc41 fedora 331.3 KiB authselect x86_64 1.5.0-8.fc41 fedora 157.6 KiB authselect-libs x86_64 1.5.0-8.fc41 fedora 822.2 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils x86_64 2.43.1-2.fc41 fedora 27.5 MiB build-reproducibility-srpm-macros noarch 0.3.6-3.fc41 updates 735.0 B bzip2-libs x86_64 1.0.8-19.fc41 fedora 80.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc41 fedora 2.4 MiB coreutils-common x86_64 9.5-11.fc41 updates 11.2 MiB cracklib x86_64 2.9.11-6.fc41 fedora 238.9 KiB crypto-policies noarch 20241029-1.git8baf557.fc41 updates 136.9 KiB curl x86_64 8.9.1-2.fc41 fedora 796.2 KiB cyrus-sasl-lib x86_64 2.1.28-27.fc41 fedora 2.3 MiB debugedit x86_64 5.1-1.fc41 updates 199.8 KiB dwz x86_64 0.15-8.fc41 fedora 298.9 KiB ed x86_64 1.20.2-2.fc41 fedora 146.9 KiB efi-srpm-macros noarch 5-13.fc41 updates 40.2 KiB elfutils x86_64 0.192-6.fc41 updates 2.7 MiB elfutils-debuginfod-client x86_64 0.192-6.fc41 updates 84.1 KiB elfutils-default-yama-scope noarch 0.192-6.fc41 updates 1.8 KiB elfutils-libelf x86_64 0.192-6.fc41 updates 1.2 MiB elfutils-libs x86_64 0.192-6.fc41 updates 666.3 KiB fedora-gpg-keys noarch 41-1 fedora 126.4 KiB fedora-release noarch 41-28 updates 0.0 B fedora-release-identity-basic noarch 41-28 updates 682.0 B fedora-repos noarch 41-1 fedora 4.9 KiB file x86_64 5.45-7.fc41 fedora 103.5 KiB file-libs x86_64 5.45-7.fc41 fedora 9.9 MiB filesystem x86_64 3.18-23.fc41 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.3.2-1.fc41 fedora 39.0 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal x86_64 15.2-3.fc41 updates 13.0 MiB gdbm x86_64 1:1.23-7.fc41 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-7.fc41 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.1-2.fc41 fedora 747.0 B glibc x86_64 2.40-12.fc41 updates 6.7 MiB glibc-common x86_64 2.40-12.fc41 updates 1.0 MiB glibc-gconv-extra x86_64 2.40-12.fc41 updates 8.0 MiB gmp x86_64 1:6.3.0-2.fc41 fedora 811.4 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-10.fc41 fedora 88.3 KiB json-c x86_64 0.17-4.fc41 fedora 82.4 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-4.fc41 fedora 54.4 KiB krb5-libs x86_64 1.21.3-3.fc41 updates 2.3 MiB libacl x86_64 2.3.2-2.fc41 fedora 40.0 KiB libarchive x86_64 3.7.4-4.fc41 updates 926.6 KiB libattr x86_64 2.5.2-4.fc41 fedora 28.5 KiB libblkid x86_64 2.40.2-4.fc41 fedora 258.5 KiB libbrotli x86_64 1.1.0-5.fc41 fedora 837.6 KiB libcap x86_64 2.70-4.fc41 fedora 220.2 KiB libcap-ng x86_64 0.8.5-3.fc41 fedora 69.2 KiB libcom_err x86_64 1.47.1-6.fc41 fedora 67.2 KiB libcurl x86_64 8.9.1-2.fc41 fedora 818.1 KiB libeconf x86_64 0.6.2-3.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-14.fc41 fedora 895.7 KiB libfdisk x86_64 2.40.2-4.fc41 fedora 362.9 KiB libffi x86_64 3.4.6-3.fc41 fedora 86.4 KiB libgcc x86_64 14.2.1-3.fc41 fedora 274.6 KiB libgomp x86_64 14.2.1-3.fc41 fedora 523.5 KiB libidn2 x86_64 2.3.7-2.fc41 fedora 329.1 KiB libmount x86_64 2.40.2-4.fc41 fedora 351.8 KiB libnghttp2 x86_64 1.62.1-2.fc41 fedora 166.1 KiB libnsl2 x86_64 2.0.1-2.fc41 fedora 57.9 KiB libpkgconf x86_64 2.3.0-1.fc41 fedora 78.2 KiB libpsl x86_64 0.21.5-4.fc41 fedora 80.5 KiB libpwquality x86_64 1.4.5-11.fc41 fedora 417.8 KiB libselinux x86_64 3.7-5.fc41 fedora 181.0 KiB libsemanage x86_64 3.7-2.fc41 fedora 293.5 KiB libsepol x86_64 3.7-2.fc41 fedora 817.8 KiB libsmartcols x86_64 2.40.2-4.fc41 fedora 180.4 KiB libssh x86_64 0.10.6-8.fc41 fedora 513.3 KiB libssh-config noarch 0.10.6-8.fc41 fedora 277.0 B libstdc++ x86_64 14.2.1-3.fc41 fedora 2.8 MiB libtasn1 x86_64 4.19.0-9.fc41 fedora 175.7 KiB libtirpc x86_64 1.3.6-1.fc41 updates 202.7 KiB libtool-ltdl x86_64 2.4.7-12.fc41 fedora 66.2 KiB libunistring x86_64 1.1-8.fc41 fedora 1.7 MiB libutempter x86_64 1.2.1-15.fc41 fedora 57.7 KiB libuuid x86_64 2.40.2-4.fc41 fedora 37.5 KiB libverto x86_64 0.3.2-9.fc41 fedora 29.5 KiB libxcrypt x86_64 4.4.36-10.fc41 updates 271.4 KiB libxml2 x86_64 2.12.8-2.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-2.fc41 fedora 795.9 KiB lua-libs x86_64 5.4.6-6.fc41 fedora 285.0 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs x86_64 1.10.0-1.fc41 fedora 145.5 KiB mpfr x86_64 4.2.1-5.fc41 fedora 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 fedora 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap x86_64 2.6.8-5.fc41 fedora 644.2 KiB openssl-libs x86_64 1:3.2.2-9.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 fedora 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam x86_64 1.6.1-6.fc41 updates 1.8 MiB pam-libs x86_64 1.6.1-6.fc41 updates 139.0 KiB pcre2 x86_64 10.44-1.fc41.1 fedora 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf x86_64 2.3.0-1.fc41 fedora 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc41 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc41 fedora 989.0 B popt x86_64 1.19-7.fc41 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.0-1.fc41 updates 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc41 fedora 500.0 B qt6-srpm-macros noarch 6.8.0-1.fc41 updates 456.0 B readline x86_64 8.2-10.fc41 fedora 493.2 KiB rpm x86_64 4.20.0-1.fc41 fedora 3.1 MiB rpm-build-libs x86_64 4.20.0-1.fc41 fedora 206.7 KiB rpm-libs x86_64 4.20.0-1.fc41 fedora 725.9 KiB rpm-sequoia x86_64 1.7.0-2.fc41 fedora 2.4 MiB rust-srpm-macros noarch 26.3-3.fc41 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc41 fedora 1.4 MiB systemd-libs x86_64 256.8-1.fc41 updates 2.0 MiB util-linux-core x86_64 2.40.2-4.fc41 fedora 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc41 fedora 88.4 KiB xz-libs x86_64 1:5.6.2-2.fc41 fedora 214.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip x86_64 3.0-41.fc41 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc41 fedora 134.0 KiB zstd x86_64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 181 MiB extra will be used (install 181 MiB, remove 0 B). [ 1/154] cpio-0:2.15-2.fc41.x86_64 100% | 1.0 MiB/s | 291.8 KiB | 00m00s [ 2/154] bzip2-0:1.0.8-19.fc41.x86_64 100% | 162.1 KiB/s | 52.5 KiB | 00m00s [ 3/154] diffutils-0:3.10-8.fc41.x86_6 100% | 5.1 MiB/s | 405.4 KiB | 00m00s [ 4/154] bash-0:5.2.32-1.fc41.x86_64 100% | 4.6 MiB/s | 1.8 MiB | 00m00s [ 5/154] grep-0:3.11-9.fc41.x86_64 100% | 6.4 MiB/s | 299.7 KiB | 00m00s [ 6/154] gzip-0:1.13-2.fc41.x86_64 100% | 5.9 MiB/s | 170.2 KiB | 00m00s [ 7/154] info-0:7.1-3.fc41.x86_64 100% | 5.4 MiB/s | 182.5 KiB | 00m00s [ 8/154] findutils-1:4.10.0-4.fc41.x86 100% | 4.5 MiB/s | 548.5 KiB | 00m00s [ 9/154] patch-0:2.7.6-25.fc41.x86_64 100% | 4.7 MiB/s | 131.0 KiB | 00m00s [ 10/154] redhat-rpm-config-0:293-1.fc4 100% | 2.9 MiB/s | 82.0 KiB | 00m00s [ 11/154] rpm-build-0:4.20.0-1.fc41.x86 100% | 1.8 MiB/s | 82.8 KiB | 00m00s [ 12/154] sed-0:4.9-3.fc41.x86_64 100% | 6.9 MiB/s | 317.7 KiB | 00m00s [ 13/154] unzip-0:6.0-64.fc41.x86_64 100% | 6.2 MiB/s | 184.9 KiB | 00m00s [ 14/154] which-0:2.21-42.fc41.x86_64 100% | 1.4 MiB/s | 41.6 KiB | 00m00s [ 15/154] tar-2:1.35-4.fc41.x86_64 100% | 11.7 MiB/s | 860.7 KiB | 00m00s [ 16/154] shadow-utils-2:4.15.1-12.fc41 100% | 12.5 MiB/s | 1.3 MiB | 00m00s [ 17/154] xz-1:5.6.2-2.fc41.x86_64 100% | 6.6 MiB/s | 471.5 KiB | 00m00s [ 18/154] gawk-0:5.3.0-4.fc41.x86_64 100% | 22.8 MiB/s | 1.1 MiB | 00m00s [ 19/154] fedora-release-common-0:41-28 100% | 183.3 KiB/s | 23.5 KiB | 00m00s [ 20/154] util-linux-0:2.40.2-4.fc41.x8 100% | 26.8 MiB/s | 1.2 MiB | 00m00s [ 21/154] filesystem-0:3.18-23.fc41.x86 100% | 25.9 MiB/s | 1.1 MiB | 00m00s [ 22/154] ncurses-libs-0:6.5-2.20240629 100% | 10.9 MiB/s | 334.0 KiB | 00m00s [ 23/154] bzip2-libs-0:1.0.8-19.fc41.x8 100% | 1.6 MiB/s | 41.1 KiB | 00m00s [ 24/154] glibc-minimal-langpack-0:2.40 100% | 586.3 KiB/s | 106.7 KiB | 00m00s [ 25/154] libselinux-0:3.7-5.fc41.x86_6 100% | 3.2 MiB/s | 87.8 KiB | 00m00s [ 26/154] pcre2-0:10.44-1.fc41.1.x86_64 100% | 8.5 MiB/s | 243.1 KiB | 00m00s [ 27/154] ed-0:1.20.2-2.fc41.x86_64 100% | 3.1 MiB/s | 81.8 KiB | 00m00s [ 28/154] libattr-0:2.5.2-4.fc41.x86_64 100% | 726.9 KiB/s | 18.2 KiB | 00m00s [ 29/154] ansible-srpm-macros-0:1-16.fc 100% | 831.0 KiB/s | 20.8 KiB | 00m00s [ 30/154] dwz-0:0.15-8.fc41.x86_64 100% | 3.4 MiB/s | 138.9 KiB | 00m00s [ 31/154] file-0:5.45-7.fc41.x86_64 100% | 1.7 MiB/s | 49.1 KiB | 00m00s [ 32/154] coreutils-0:9.5-11.fc41.x86_6 100% | 2.8 MiB/s | 1.1 MiB | 00m00s [ 33/154] fonts-srpm-macros-1:2.0.5-17. 100% | 1.1 MiB/s | 27.0 KiB | 00m00s [ 34/154] forge-srpm-macros-0:0.3.2-1.f 100% | 788.1 KiB/s | 19.7 KiB | 00m00s [ 35/154] fpc-srpm-macros-0:1.3-13.fc41 100% | 318.5 KiB/s | 8.0 KiB | 00m00s [ 36/154] ghc-srpm-macros-0:1.9.1-2.fc4 100% | 312.3 KiB/s | 9.1 KiB | 00m00s [ 37/154] gnat-srpm-macros-0:6-6.fc41.n 100% | 358.1 KiB/s | 9.0 KiB | 00m00s [ 38/154] go-srpm-macros-0:3.6.0-3.fc41 100% | 1.1 MiB/s | 28.0 KiB | 00m00s [ 39/154] kernel-srpm-macros-0:1.0-24.f 100% | 379.5 KiB/s | 9.9 KiB | 00m00s [ 40/154] lua-srpm-macros-0:1-14.fc41.n 100% | 355.2 KiB/s | 8.9 KiB | 00m00s [ 41/154] ocaml-srpm-macros-0:10-3.fc41 100% | 368.0 KiB/s | 9.2 KiB | 00m00s [ 42/154] openblas-srpm-macros-0:2-18.f 100% | 308.6 KiB/s | 7.7 KiB | 00m00s [ 43/154] package-notes-srpm-macros-0:0 100% | 393.2 KiB/s | 9.8 KiB | 00m00s [ 44/154] perl-srpm-macros-0:1-56.fc41. 100% | 340.5 KiB/s | 8.5 KiB | 00m00s [ 45/154] python-srpm-macros-0:3.13-3.f 100% | 948.9 KiB/s | 23.7 KiB | 00m00s [ 46/154] qt5-srpm-macros-0:5.15.15-1.f 100% | 202.2 KiB/s | 8.9 KiB | 00m00s [ 47/154] rust-srpm-macros-0:26.3-3.fc4 100% | 484.3 KiB/s | 12.1 KiB | 00m00s [ 48/154] rpm-0:4.20.0-1.fc41.x86_64 100% | 10.1 MiB/s | 547.4 KiB | 00m00s [ 49/154] zip-0:3.0-41.fc41.x86_64 100% | 8.9 MiB/s | 264.8 KiB | 00m00s [ 50/154] zig-srpm-macros-0:1-3.fc41.no 100% | 232.1 KiB/s | 8.1 KiB | 00m00s [ 51/154] popt-0:1.19-7.fc41.x86_64 100% | 1.9 MiB/s | 65.9 KiB | 00m00s [ 52/154] readline-0:8.2-10.fc41.x86_64 100% | 7.7 MiB/s | 213.2 KiB | 00m00s [ 53/154] rpm-libs-0:4.20.0-1.fc41.x86_ 100% | 6.6 MiB/s | 309.4 KiB | 00m00s [ 54/154] rpm-build-libs-0:4.20.0-1.fc4 100% | 1.5 MiB/s | 98.6 KiB | 00m00s [ 55/154] zstd-0:1.5.6-2.fc41.x86_64 100% | 9.2 MiB/s | 481.5 KiB | 00m00s [ 56/154] libacl-0:2.3.2-2.fc41.x86_64 100% | 700.0 KiB/s | 24.5 KiB | 00m00s [ 57/154] audit-libs-0:4.0.2-1.fc41.x86 100% | 3.7 MiB/s | 126.2 KiB | 00m00s [ 58/154] libeconf-0:0.6.2-3.fc41.x86_6 100% | 1.3 MiB/s | 32.2 KiB | 00m00s [ 59/154] libsemanage-0:3.7-2.fc41.x86_ 100% | 4.4 MiB/s | 116.3 KiB | 00m00s [ 60/154] setup-0:2.15.0-5.fc41.noarch 100% | 5.6 MiB/s | 154.4 KiB | 00m00s [ 61/154] xz-libs-1:5.6.2-2.fc41.x86_64 100% | 3.1 MiB/s | 111.8 KiB | 00m00s [ 62/154] gmp-1:6.3.0-2.fc41.x86_64 100% | 10.4 MiB/s | 318.0 KiB | 00m00s [ 63/154] libcap-0:2.70-4.fc41.x86_64 100% | 3.4 MiB/s | 86.7 KiB | 00m00s [ 64/154] fedora-repos-0:41-1.noarch 100% | 249.5 KiB/s | 9.2 KiB | 00m00s [ 65/154] mpfr-0:4.2.1-5.fc41.x86_64 100% | 10.6 MiB/s | 346.3 KiB | 00m00s [ 66/154] openssl-libs-1:3.2.2-9.fc41.x 100% | 24.3 MiB/s | 2.3 MiB | 00m00s [ 67/154] libblkid-0:2.40.2-4.fc41.x86_ 100% | 4.5 MiB/s | 124.7 KiB | 00m00s [ 68/154] libcap-ng-0:0.8.5-3.fc41.x86_ 100% | 1.3 MiB/s | 32.6 KiB | 00m00s [ 69/154] libfdisk-0:2.40.2-4.fc41.x86_ 100% | 5.8 MiB/s | 159.8 KiB | 00m00s [ 70/154] libmount-0:2.40.2-4.fc41.x86_ 100% | 4.5 MiB/s | 155.5 KiB | 00m00s [ 71/154] libsmartcols-0:2.40.2-4.fc41. 100% | 3.1 MiB/s | 83.7 KiB | 00m00s [ 72/154] glibc-common-0:2.40-12.fc41.x 100% | 2.2 MiB/s | 395.1 KiB | 00m00s [ 73/154] libutempter-0:1.2.1-15.fc41.x 100% | 831.7 KiB/s | 26.6 KiB | 00m00s [ 74/154] libuuid-0:2.40.2-4.fc41.x86_6 100% | 1.1 MiB/s | 29.1 KiB | 00m00s [ 75/154] coreutils-common-0:9.5-11.fc4 100% | 6.2 MiB/s | 2.1 MiB | 00m00s [ 76/154] zlib-ng-compat-0:2.1.7-3.fc41 100% | 1.7 MiB/s | 77.7 KiB | 00m00s [ 77/154] ncurses-base-0:6.5-2.20240629 100% | 2.5 MiB/s | 88.3 KiB | 00m00s [ 78/154] libsepol-0:3.7-2.fc41.x86_64 100% | 10.8 MiB/s | 342.2 KiB | 00m00s [ 79/154] util-linux-core-0:2.40.2-4.fc 100% | 6.5 MiB/s | 537.2 KiB | 00m00s [ 80/154] pcre2-syntax-0:10.44-1.fc41.1 100% | 5.2 MiB/s | 149.9 KiB | 00m00s [ 81/154] curl-0:8.9.1-2.fc41.x86_64 100% | 10.6 MiB/s | 315.1 KiB | 00m00s [ 82/154] libgcc-0:14.2.1-3.fc41.x86_64 100% | 2.6 MiB/s | 133.3 KiB | 00m00s [ 83/154] libgomp-0:14.2.1-3.fc41.x86_6 100% | 7.1 MiB/s | 354.1 KiB | 00m00s [ 84/154] file-libs-0:5.45-7.fc41.x86_6 100% | 8.0 MiB/s | 762.0 KiB | 00m00s [ 85/154] lua-libs-0:5.4.6-6.fc41.x86_6 100% | 4.6 MiB/s | 132.0 KiB | 00m00s [ 86/154] libzstd-0:1.5.6-2.fc41.x86_64 100% | 10.8 MiB/s | 310.3 KiB | 00m00s [ 87/154] sqlite-libs-0:3.46.1-1.fc41.x 100% | 12.2 MiB/s | 712.7 KiB | 00m00s [ 88/154] libstdc++-0:14.2.1-3.fc41.x86 100% | 11.9 MiB/s | 887.8 KiB | 00m00s [ 89/154] lz4-libs-0:1.10.0-1.fc41.x86_ 100% | 2.7 MiB/s | 70.7 KiB | 00m00s [ 90/154] fedora-gpg-keys-0:41-1.noarch 100% | 4.7 MiB/s | 133.7 KiB | 00m00s [ 91/154] rpm-sequoia-0:1.7.0-2.fc41.x8 100% | 7.1 MiB/s | 892.5 KiB | 00m00s [ 92/154] ca-certificates-0:2024.2.69_v 100% | 13.1 MiB/s | 871.2 KiB | 00m00s [ 93/154] basesystem-0:11-21.fc41.noarc 100% | 294.9 KiB/s | 7.4 KiB | 00m00s [ 94/154] libxcrypt-0:4.4.36-10.fc41.x8 100% | 873.9 KiB/s | 118.9 KiB | 00m00s [ 95/154] glibc-gconv-extra-0:2.40-12.f 100% | 5.8 MiB/s | 1.7 MiB | 00m00s [ 96/154] systemd-libs-0:256.8-1.fc41.x 100% | 6.7 MiB/s | 732.1 KiB | 00m00s [ 97/154] pam-0:1.6.1-6.fc41.x86_64 100% | 13.2 MiB/s | 554.4 KiB | 00m00s [ 98/154] pam-libs-0:1.6.1-6.fc41.x86_6 100% | 1.6 MiB/s | 57.3 KiB | 00m00s [ 99/154] gdbm-libs-1:1.23-7.fc41.x86_6 100% | 2.1 MiB/s | 56.3 KiB | 00m00s [100/154] libnsl2-0:2.0.1-2.fc41.x86_64 100% | 1.1 MiB/s | 29.6 KiB | 00m00s [101/154] authselect-0:1.5.0-8.fc41.x86 100% | 2.0 MiB/s | 145.8 KiB | 00m00s [102/154] libpwquality-0:1.4.5-11.fc41. 100% | 4.5 MiB/s | 119.0 KiB | 00m00s [103/154] glibc-0:2.40-12.fc41.x86_64 100% | 5.1 MiB/s | 2.2 MiB | 00m00s [104/154] cracklib-0:2.9.11-6.fc41.x86_ 100% | 3.3 MiB/s | 92.1 KiB | 00m00s [105/154] authselect-libs-0:1.5.0-8.fc4 100% | 1.9 MiB/s | 218.0 KiB | 00m00s [106/154] elfutils-0:0.192-6.fc41.x86_6 100% | 12.4 MiB/s | 547.2 KiB | 00m00s [107/154] elfutils-libelf-0:0.192-6.fc4 100% | 1.3 MiB/s | 207.4 KiB | 00m00s [108/154] elfutils-debuginfod-client-0: 100% | 1.3 MiB/s | 46.2 KiB | 00m00s [109/154] json-c-0:0.17-4.fc41.x86_64 100% | 1.5 MiB/s | 44.0 KiB | 00m00s [110/154] debugedit-0:5.1-1.fc41.x86_64 100% | 2.2 MiB/s | 78.1 KiB | 00m00s [111/154] libarchive-0:3.7.4-4.fc41.x86 100% | 10.2 MiB/s | 409.1 KiB | 00m00s [112/154] elfutils-libs-0:0.192-6.fc41. 100% | 980.9 KiB/s | 261.9 KiB | 00m00s [113/154] libxml2-0:2.12.8-2.fc41.x86_6 100% | 8.2 MiB/s | 687.3 KiB | 00m00s [114/154] jansson-0:2.13.1-10.fc41.x86_ 100% | 1.3 MiB/s | 44.4 KiB | 00m00s [115/154] alternatives-0:1.30-1.fc41.x8 100% | 1.2 MiB/s | 42.5 KiB | 00m00s [116/154] pkgconf-pkg-config-0:2.3.0-1. 100% | 286.0 KiB/s | 10.0 KiB | 00m00s [117/154] binutils-0:2.43.1-2.fc41.x86_ 100% | 43.3 MiB/s | 6.5 MiB | 00m00s [118/154] pkgconf-m4-0:2.3.0-1.fc41.noa 100% | 477.4 KiB/s | 14.3 KiB | 00m00s [119/154] libpkgconf-0:2.3.0-1.fc41.x86 100% | 1.5 MiB/s | 38.5 KiB | 00m00s [120/154] pkgconf-0:2.3.0-1.fc41.x86_64 100% | 486.1 KiB/s | 45.2 KiB | 00m00s [121/154] build-reproducibility-srpm-ma 100% | 318.4 KiB/s | 10.8 KiB | 00m00s [122/154] add-determinism-0:0.3.6-3.fc4 100% | 19.4 MiB/s | 875.9 KiB | 00m00s [123/154] efi-srpm-macros-0:5-13.fc41.n 100% | 660.6 KiB/s | 22.5 KiB | 00m00s [124/154] pyproject-srpm-macros-0:1.16. 100% | 399.7 KiB/s | 13.6 KiB | 00m00s [125/154] qt6-srpm-macros-0:6.8.0-1.fc4 100% | 266.1 KiB/s | 9.0 KiB | 00m00s [126/154] crypto-policies-0:20241029-1. 100% | 2.6 MiB/s | 97.5 KiB | 00m00s [127/154] libtirpc-0:1.3.6-1.fc41.x86_6 100% | 2.6 MiB/s | 94.4 KiB | 00m00s [128/154] libffi-0:3.4.6-3.fc41.x86_64 100% | 1.6 MiB/s | 39.9 KiB | 00m00s [129/154] libcom_err-0:1.47.1-6.fc41.x8 100% | 603.8 KiB/s | 26.6 KiB | 00m00s [130/154] p11-kit-0:0.25.5-3.fc41.x86_6 100% | 14.1 MiB/s | 490.9 KiB | 00m00s [131/154] libtasn1-0:4.19.0-9.fc41.x86_ 100% | 2.9 MiB/s | 74.2 KiB | 00m00s [132/154] gdbm-1:1.23-7.fc41.x86_64 100% | 5.3 MiB/s | 151.8 KiB | 00m00s [133/154] p11-kit-trust-0:0.25.5-3.fc41 100% | 3.7 MiB/s | 132.1 KiB | 00m00s [134/154] keyutils-libs-0:1.6.3-4.fc41. 100% | 1.2 MiB/s | 31.6 KiB | 00m00s [135/154] libverto-0:0.3.2-9.fc41.x86_6 100% | 795.8 KiB/s | 20.7 KiB | 00m00s [136/154] elfutils-default-yama-scope-0 100% | 362.6 KiB/s | 12.3 KiB | 00m00s [137/154] fedora-release-0:41-28.noarch 100% | 371.9 KiB/s | 12.6 KiB | 00m00s [138/154] xxhash-libs-0:0.8.2-4.fc41.x8 100% | 1.3 MiB/s | 36.8 KiB | 00m00s [139/154] libcurl-0:8.9.1-2.fc41.x86_64 100% | 6.9 MiB/s | 361.9 KiB | 00m00s [140/154] krb5-libs-0:1.21.3-3.fc41.x86 100% | 3.5 MiB/s | 757.9 KiB | 00m00s [141/154] libbrotli-0:1.1.0-5.fc41.x86_ 100% | 6.8 MiB/s | 340.5 KiB | 00m00s [142/154] libidn2-0:2.3.7-2.fc41.x86_64 100% | 4.4 MiB/s | 118.4 KiB | 00m00s [143/154] libnghttp2-0:1.62.1-2.fc41.x8 100% | 2.6 MiB/s | 76.6 KiB | 00m00s [144/154] gdb-minimal-0:15.2-3.fc41.x86 100% | 23.4 MiB/s | 4.3 MiB | 00m00s [145/154] libpsl-0:0.21.5-4.fc41.x86_64 100% | 2.3 MiB/s | 64.1 KiB | 00m00s [146/154] openldap-0:2.6.8-5.fc41.x86_6 100% | 9.2 MiB/s | 255.6 KiB | 00m00s [147/154] libssh-0:0.10.6-8.fc41.x86_64 100% | 4.5 MiB/s | 211.8 KiB | 00m00s [148/154] publicsuffix-list-dafsa-0:202 100% | 2.3 MiB/s | 58.3 KiB | 00m00s [149/154] libssh-config-0:0.10.6-8.fc41 100% | 308.0 KiB/s | 9.2 KiB | 00m00s [150/154] libunistring-0:1.1-8.fc41.x86 100% | 7.7 MiB/s | 544.8 KiB | 00m00s [151/154] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 24.3 MiB/s | 794.9 KiB | 00m00s [152/154] libtool-ltdl-0:2.4.7-12.fc41. 100% | 1.2 MiB/s | 35.6 KiB | 00m00s [153/154] fedora-release-identity-basic 100% | 384.2 KiB/s | 13.4 KiB | 00m00s [154/154] libevent-0:2.1.12-14.fc41.x86 100% | 3.9 MiB/s | 257.5 KiB | 00m00s -------------------------------------------------------------------------------- [154/154] Total 100% | 16.3 MiB/s | 53.3 MiB | 00m03s Running transaction Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/156] Verify package files 100% | 747.0 B/s | 154.0 B | 00m00s [ 2/156] Prepare transaction 100% | 1.9 KiB/s | 154.0 B | 00m00s [ 3/156] Installing libgcc-0:14.2.1-3. 100% | 134.9 MiB/s | 276.3 KiB | 00m00s [ 4/156] Installing fedora-release-ide 100% | 918.0 KiB/s | 940.0 B | 00m00s [ 5/156] Installing fedora-gpg-keys-0: 100% | 14.0 MiB/s | 172.2 KiB | 00m00s [ 6/156] Installing fedora-repos-0:41- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 7/156] Installing fedora-release-com 100% | 11.7 MiB/s | 24.0 KiB | 00m00s [ 8/156] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 9/156] Installing setup-0:2.15.0-5.f 100% | 47.3 MiB/s | 726.1 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 10/156] Installing filesystem-0:3.18- 100% | 1.6 MiB/s | 212.5 KiB | 00m00s [ 11/156] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/156] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 13/156] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 14/156] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [ 15/156] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 16/156] Installing pcre2-syntax-0:10. 100% | 124.1 MiB/s | 254.1 KiB | 00m00s [ 17/156] Installing ncurses-base-0:6.5 100% | 34.3 MiB/s | 351.7 KiB | 00m00s [ 18/156] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 19/156] Installing ncurses-libs-0:6.5 100% | 137.0 MiB/s | 981.8 KiB | 00m00s [ 20/156] Installing glibc-0:2.40-12.fc 100% | 215.7 MiB/s | 6.7 MiB | 00m00s [ 21/156] Installing bash-0:5.2.32-1.fc 100% | 263.5 MiB/s | 8.2 MiB | 00m00s [ 22/156] Installing glibc-common-0:2.4 100% | 130.9 MiB/s | 1.0 MiB | 00m00s [ 23/156] Installing glibc-gconv-extra- 100% | 150.0 MiB/s | 8.1 MiB | 00m00s [ 24/156] Installing zlib-ng-compat-0:2 100% | 131.6 MiB/s | 134.8 KiB | 00m00s [ 25/156] Installing bzip2-libs-0:1.0.8 100% | 79.9 MiB/s | 81.8 KiB | 00m00s [ 26/156] Installing xz-libs-1:5.6.2-2. 100% | 210.4 MiB/s | 215.5 KiB | 00m00s [ 27/156] Installing popt-0:1.19-7.fc41 100% | 35.0 MiB/s | 143.5 KiB | 00m00s [ 28/156] Installing readline-0:8.2-10. 100% | 80.6 MiB/s | 495.3 KiB | 00m00s [ 29/156] Installing libuuid-0:2.40.2-4 100% | 37.7 MiB/s | 38.6 KiB | 00m00s [ 30/156] Installing libblkid-0:2.40.2- 100% | 126.7 MiB/s | 259.5 KiB | 00m00s [ 31/156] Installing libattr-0:2.5.2-4. 100% | 28.8 MiB/s | 29.5 KiB | 00m00s [ 32/156] Installing libacl-0:2.3.2-2.f 100% | 39.8 MiB/s | 40.7 KiB | 00m00s [ 33/156] Installing gmp-1:6.3.0-2.fc41 100% | 198.6 MiB/s | 813.7 KiB | 00m00s [ 34/156] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.2 KiB | 00m00s [ 35/156] Installing elfutils-libelf-0: 100% | 234.0 MiB/s | 1.2 MiB | 00m00s [ 36/156] Installing libstdc++-0:14.2.1 100% | 276.6 MiB/s | 2.8 MiB | 00m00s [ 37/156] Installing libxcrypt-0:4.4.36 100% | 133.9 MiB/s | 274.1 KiB | 00m00s [ 38/156] Installing libeconf-0:0.6.2-3 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [ 39/156] Installing gdbm-libs-1:1.23-7 100% | 120.7 MiB/s | 123.6 KiB | 00m00s [ 40/156] Installing dwz-0:0.15-8.fc41. 100% | 146.6 MiB/s | 300.3 KiB | 00m00s [ 41/156] Installing mpfr-0:4.2.1-5.fc4 100% | 203.5 MiB/s | 833.7 KiB | 00m00s [ 42/156] Installing gawk-0:5.3.0-4.fc4 100% | 157.5 MiB/s | 1.7 MiB | 00m00s [ 43/156] Installing unzip-0:6.0-64.fc4 100% | 127.0 MiB/s | 390.3 KiB | 00m00s [ 44/156] Installing file-libs-0:5.45-7 100% | 496.7 MiB/s | 9.9 MiB | 00m00s [ 45/156] Installing file-0:5.45-7.fc41 100% | 6.8 MiB/s | 105.0 KiB | 00m00s >>> Running pre-install scriptlet: crypto-policies-0:20241029-1.git8baf557.fc41. >>> Finished pre-install scriptlet: crypto-policies-0:20241029-1.git8baf557.fc41 >>> Scriptlet output: >>> /var/tmp/rpm-tmp.VUgNoZ: line 2: rm: command not found >>> [ 46/156] Installing crypto-policies-0: 100% | 13.3 MiB/s | 163.3 KiB | 00m00s [ 47/156] Installing pcre2-0:10.44-1.fc 100% | 213.2 MiB/s | 654.9 KiB | 00m00s [ 48/156] Installing grep-0:3.11-9.fc41 100% | 111.5 MiB/s | 1.0 MiB | 00m00s [ 49/156] Installing xz-1:5.6.2-2.fc41. 100% | 120.5 MiB/s | 1.2 MiB | 00m00s [ 50/156] Installing libcap-ng-0:0.8.5- 100% | 69.4 MiB/s | 71.0 KiB | 00m00s [ 51/156] Installing audit-libs-0:4.0.2 100% | 162.8 MiB/s | 333.4 KiB | 00m00s [ 52/156] Installing pam-libs-0:1.6.1-6 100% | 137.9 MiB/s | 141.2 KiB | 00m00s [ 53/156] Installing libcap-0:2.70-4.fc 100% | 55.0 MiB/s | 225.2 KiB | 00m00s [ 54/156] Installing systemd-libs-0:256 100% | 226.0 MiB/s | 2.0 MiB | 00m00s [ 55/156] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB | 00m00s [ 56/156] Installing libsepol-0:3.7-2.f 100% | 266.5 MiB/s | 818.8 KiB | 00m00s [ 57/156] Installing libselinux-0:3.7-5 100% | 89.0 MiB/s | 182.3 KiB | 00m00s [ 58/156] Installing sed-0:4.9-3.fc41.x 100% | 121.3 MiB/s | 869.7 KiB | 00m00s [ 59/156] Installing findutils-1:4.10.0 100% | 168.9 MiB/s | 1.9 MiB | 00m00s [ 60/156] Installing libmount-0:2.40.2- 100% | 172.3 MiB/s | 352.9 KiB | 00m00s [ 61/156] Installing lua-libs-0:5.4.6-6 100% | 139.8 MiB/s | 286.2 KiB | 00m00s [ 62/156] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB | 00m00s [ 63/156] Installing alternatives-0:1.3 100% | 66.3 MiB/s | 67.9 KiB | 00m00s [ 64/156] Installing libcom_err-0:1.47. 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 65/156] Installing libffi-0:3.4.6-3.f 100% | 85.7 MiB/s | 87.8 KiB | 00m00s [ 66/156] Installing libtasn1-0:4.19.0- 100% | 86.7 MiB/s | 177.5 KiB | 00m00s [ 67/156] Installing p11-kit-0:0.25.5-3 100% | 147.2 MiB/s | 2.2 MiB | 00m00s [ 68/156] Installing libunistring-0:1.1 100% | 247.2 MiB/s | 1.7 MiB | 00m00s [ 69/156] Installing libidn2-0:2.3.7-2. 100% | 65.4 MiB/s | 335.1 KiB | 00m00s [ 70/156] Installing libpsl-0:0.21.5-4. 100% | 79.7 MiB/s | 81.7 KiB | 00m00s [ 71/156] Installing p11-kit-trust-0:0. 100% | 22.6 MiB/s | 393.1 KiB | 00m00s [ 72/156] Installing zstd-0:1.5.6-2.fc4 100% | 211.4 MiB/s | 1.7 MiB | 00m00s [ 73/156] Installing util-linux-core-0: 100% | 114.3 MiB/s | 1.5 MiB | 00m00s [ 74/156] Installing tar-2:1.35-4.fc41. 100% | 197.2 MiB/s | 3.0 MiB | 00m00s [ 75/156] Installing libsemanage-0:3.7- 100% | 96.1 MiB/s | 295.2 KiB | 00m00s [ 76/156] Installing shadow-utils-2:4.1 100% | 78.6 MiB/s | 4.2 MiB | 00m00s [ 77/156] Installing libutempter-0:1.2. 100% | 29.2 MiB/s | 59.7 KiB | 00m00s [ 78/156] Installing zip-0:3.0-41.fc41. 100% | 138.1 MiB/s | 707.1 KiB | 00m00s [ 79/156] Installing gdbm-1:1.23-7.fc41 100% | 91.0 MiB/s | 465.8 KiB | 00m00s [ 80/156] Installing cyrus-sasl-lib-0:2 100% | 230.6 MiB/s | 2.3 MiB | 00m00s [ 81/156] Installing libfdisk-0:2.40.2- 100% | 177.8 MiB/s | 364.1 KiB | 00m00s [ 82/156] Installing libxml2-0:2.12.8-2 100% | 244.6 MiB/s | 1.7 MiB | 00m00s [ 83/156] Installing bzip2-0:1.0.8-19.f 100% | 48.9 MiB/s | 100.2 KiB | 00m00s [ 84/156] Installing sqlite-libs-0:3.46 100% | 238.2 MiB/s | 1.4 MiB | 00m00s [ 85/156] Installing add-determinism-0: 100% | 261.8 MiB/s | 2.4 MiB | 00m00s [ 86/156] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 87/156] Installing ed-0:1.20.2-2.fc41 100% | 72.8 MiB/s | 149.2 KiB | 00m00s [ 88/156] Installing patch-0:2.7.6-25.f 100% | 131.0 MiB/s | 268.2 KiB | 00m00s [ 89/156] Installing elfutils-default-y 100% | 145.9 KiB/s | 2.0 KiB | 00m00s [ 90/156] Installing elfutils-libs-0:0. 100% | 163.1 MiB/s | 668.1 KiB | 00m00s [ 91/156] Installing cpio-0:2.15-2.fc41 100% | 100.0 MiB/s | 1.1 MiB | 00m00s [ 92/156] Installing diffutils-0:3.10-8 100% | 159.0 MiB/s | 1.6 MiB | 00m00s [ 93/156] Installing libgomp-0:14.2.1-3 100% | 256.2 MiB/s | 524.8 KiB | 00m00s [ 94/156] Installing json-c-0:0.17-4.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s [ 95/156] Installing jansson-0:2.13.1-1 100% | 87.6 MiB/s | 89.7 KiB | 00m00s [ 96/156] Installing libpkgconf-0:2.3.0 100% | 77.5 MiB/s | 79.3 KiB | 00m00s [ 97/156] Installing pkgconf-0:2.3.0-1. 100% | 44.5 MiB/s | 91.1 KiB | 00m00s [ 98/156] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [ 99/156] Installing keyutils-libs-0:1. 100% | 27.2 MiB/s | 55.8 KiB | 00m00s [100/156] Installing libverto-0:0.3.2-9 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [101/156] Installing xxhash-libs-0:0.8. 100% | 87.7 MiB/s | 89.8 KiB | 00m00s [102/156] Installing libbrotli-0:1.1.0- 100% | 205.0 MiB/s | 839.9 KiB | 00m00s [103/156] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB | 00m00s [104/156] Installing libtool-ltdl-0:2.4 100% | 32.9 MiB/s | 67.3 KiB | 00m00s [105/156] Installing coreutils-common-0 100% | 233.1 MiB/s | 11.2 MiB | 00m00s [106/156] Installing openssl-libs-1:3.2 100% | 301.1 MiB/s | 7.8 MiB | 00m00s [107/156] Installing coreutils-0:9.5-11 100% | 135.9 MiB/s | 5.7 MiB | 00m00s [108/156] Installing ca-certificates-0: 100% | 2.3 MiB/s | 2.4 MiB | 00m01s [109/156] Installing krb5-libs-0:1.21.3 100% | 178.4 MiB/s | 2.3 MiB | 00m00s [110/156] Installing libarchive-0:3.7.4 100% | 226.7 MiB/s | 928.6 KiB | 00m00s [111/156] Installing libtirpc-0:1.3.6-1 100% | 99.8 MiB/s | 204.5 KiB | 00m00s [112/156] Installing gzip-0:1.13-2.fc41 100% | 77.1 MiB/s | 394.6 KiB | 00m00s [113/156] Installing authselect-libs-0: 100% | 81.8 MiB/s | 837.2 KiB | 00m00s [114/156] Installing cracklib-0:2.9.11- 100% | 30.6 MiB/s | 250.3 KiB | 00m00s [115/156] Installing libpwquality-0:1.4 100% | 46.7 MiB/s | 430.1 KiB | 00m00s [116/156] Installing libnsl2-0:2.0.1-2. 100% | 28.8 MiB/s | 59.1 KiB | 00m00s [117/156] Installing pam-0:1.6.1-6.fc41 100% | 75.1 MiB/s | 1.9 MiB | 00m00s [118/156] Installing libssh-0:0.10.6-8. 100% | 167.8 MiB/s | 515.4 KiB | 00m00s [119/156] Installing rpm-sequoia-0:1.7. 100% | 263.0 MiB/s | 2.4 MiB | 00m00s [120/156] Installing rpm-libs-0:4.20.0- 100% | 177.6 MiB/s | 727.4 KiB | 00m00s [121/156] Installing rpm-build-libs-0:4 100% | 101.3 MiB/s | 207.5 KiB | 00m00s [122/156] Installing libevent-0:2.1.12- 100% | 175.7 MiB/s | 899.5 KiB | 00m00s [123/156] Installing openldap-0:2.6.8-5 100% | 126.6 MiB/s | 648.0 KiB | 00m00s [124/156] Installing libcurl-0:8.9.1-2. 100% | 200.0 MiB/s | 819.2 KiB | 00m00s [125/156] Installing elfutils-debuginfo 100% | 42.2 MiB/s | 86.3 KiB | 00m00s [126/156] Installing elfutils-0:0.192-6 100% | 222.9 MiB/s | 2.7 MiB | 00m00s [127/156] Installing binutils-0:2.43.1- 100% | 262.2 MiB/s | 27.5 MiB | 00m00s [128/156] Installing gdb-minimal-0:15.2 100% | 295.3 MiB/s | 13.0 MiB | 00m00s [129/156] Installing debugedit-0:5.1-1. 100% | 98.9 MiB/s | 202.5 KiB | 00m00s [130/156] Installing curl-0:8.9.1-2.fc4 100% | 35.5 MiB/s | 798.6 KiB | 00m00s [131/156] Installing rpm-0:4.20.0-1.fc4 100% | 86.4 MiB/s | 2.5 MiB | 00m00s [132/156] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [133/156] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [134/156] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [135/156] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [136/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [137/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [138/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [139/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [140/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [141/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [142/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [143/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [144/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/156] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [146/156] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [147/156] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s [148/156] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [149/156] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [150/156] Installing redhat-rpm-config- 100% | 61.9 MiB/s | 190.1 KiB | 00m00s [151/156] Installing rpm-build-0:4.20.0 100% | 39.6 MiB/s | 202.8 KiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 83.3 MiB/s | 3.7 MiB | 00m00s [154/156] Installing authselect-0:1.5.0 100% | 39.5 MiB/s | 161.9 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 40.2 MiB/s | 82.4 KiB | 00m00s [156/156] Installing info-0:7.1-3.fc41. 100% | 244.2 KiB/s | 362.2 KiB | 00m01s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-3.fc41.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc41.x86_64 authselect-libs-1.5.0-8.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-1.fc41.x86_64 binutils-2.43.1-2.fc41.x86_64 build-reproducibility-srpm-macros-0.3.6-3.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch coreutils-9.5-11.fc41.x86_64 coreutils-common-9.5-11.fc41.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241029-1.git8baf557.fc41.noarch curl-8.9.1-2.fc41.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.1-1.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-13.fc41.noarch elfutils-0.192-6.fc41.x86_64 elfutils-debuginfod-client-0.192-6.fc41.x86_64 elfutils-default-yama-scope-0.192-6.fc41.noarch elfutils-libelf-0.192-6.fc41.x86_64 elfutils-libs-0.192-6.fc41.x86_64 fedora-gpg-keys-41-1.noarch fedora-release-41-28.noarch fedora-release-common-41-28.noarch fedora-release-identity-basic-41-28.noarch fedora-repos-41-1.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.3.2-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.2-3.fc41.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-12.fc41.x86_64 glibc-common-2.40-12.fc41.x86_64 glibc-gconv-extra-2.40-12.fc41.x86_64 glibc-minimal-langpack-2.40-12.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 json-c-0.17-4.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-3.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-4.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-4.fc41.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-6.fc41.x86_64 libcurl-8.9.1-2.fc41.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-4.fc41.x86_64 libffi-3.4.6-3.fc41.x86_64 libgcc-14.2.1-3.fc41.x86_64 libgomp-14.2.1-3.fc41.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-4.fc41.x86_64 libnghttp2-1.62.1-2.fc41.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc41.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-5.fc41.x86_64 libsemanage-3.7-2.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-4.fc41.x86_64 libssh-0.10.6-8.fc41.x86_64 libssh-config-0.10.6-8.fc41.noarch libstdc++-14.2.1-3.fc41.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.6-1.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libutempter-1.2.1-15.fc41.x86_64 libuuid-2.40.2-4.fc41.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-10.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-9.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc41.x86_64 pam-libs-1.6.1-6.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc41.x86_64 pkgconf-m4-2.3.0-1.fc41.noarch pkgconf-pkg-config-2.3.0-1.fc41.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.0-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc41.noarch qt6-srpm-macros-6.8.0-1.fc41.noarch readline-8.2-10.fc41.x86_64 redhat-rpm-config-293-1.fc41.noarch rpm-4.20.0-1.fc41.x86_64 rpm-build-4.20.0-1.fc41.x86_64 rpm-build-libs-4.20.0-1.fc41.x86_64 rpm-libs-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc41.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-12.fc41.x86_64 sqlite-libs-3.46.1-1.fc41.x86_64 systemd-libs-256.8-1.fc41.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-4.fc41.x86_64 util-linux-core-2.40.2-4.fc41.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc41.x86_64 xz-5.6.2-2.fc41.x86_64 xz-libs-5.6.2-2.fc41.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1732585644.956362/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-iy21xocb/R-CRAN-clustur/R-CRAN-clustur.spec) Config(child) 0 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm) Config(fedora-41-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1732585644.956362/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 python3-dnf-4.22.0-1.fc41.noarch python3-dnf-plugins-core-4.10.0-1.fc41.noarch dnf5-5.2.7.0-1.fc41.x86_64 dnf5-plugins-5.2.7.0-1.fc41.x86_64 Finish: chroot init Start: build phase for R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm Start: build setup for R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Updating and loading repositories: updates 100% | 1.1 MiB/s | 29.4 KiB | 00m00s fedora 100% | 1.1 MiB/s | 27.5 KiB | 00m00s Copr repository 100% | 48.0 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 32.3 MiB/s | 12.2 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-CRAN-Matrix x86_64 1.7.1-1.fc41.copr8157422 copr_base 8.2 MiB R-CRAN-Rcpp x86_64 1.0.13.1-1.fc41.copr8204071 copr_base 8.4 MiB R-CRAN-testthat x86_64 3.2.1.1-1.fc41.copr7364943 copr_base 3.0 MiB R-core x86_64 4.4.2-1.fc41 updates 101.6 MiB R-devel x86_64 4.4.2-1.fc41 updates 0.0 B Installing dependencies: R-CRAN-R6 noarch 2.5.1-1.fc41.copr7349938 copr_base 115.9 KiB R-CRAN-brio x86_64 1.1.5-1.fc41.copr7352484 copr_base 76.7 KiB R-CRAN-callr noarch 3.7.6-1.fc41.copr7356069 copr_base 711.7 KiB R-CRAN-cli x86_64 3.6.3-1.fc41.copr7649835 copr_base 2.4 MiB R-CRAN-crayon noarch 1.5.3-1.fc41.copr7633037 copr_base 235.8 KiB R-CRAN-desc noarch 1.4.3-1.fc41.copr7353609 copr_base 514.2 KiB R-CRAN-diffobj x86_64 0.3.5-1.fc41.copr7353680 copr_base 1.6 MiB R-CRAN-digest x86_64 0.6.37-1.fc41.copr7936834 copr_base 495.7 KiB R-CRAN-evaluate noarch 1.0.1-1.fc41.copr8128148 copr_base 147.8 KiB R-CRAN-fs x86_64 1.6.5-1.fc41.copr8192618 copr_base 597.2 KiB R-CRAN-glue x86_64 1.8.0-1.fc41.copr8094211 copr_base 345.1 KiB R-CRAN-jsonlite x86_64 1.8.9-1.fc41.copr8046217 copr_base 2.3 MiB R-CRAN-lattice x86_64 0.22.6-1.fc41.copr7352639 copr_base 2.0 MiB R-CRAN-lifecycle noarch 1.0.4-1.fc41.copr7354340 copr_base 282.7 KiB R-CRAN-magrittr x86_64 2.0.3-1.fc41.copr7349936 copr_base 417.3 KiB R-CRAN-pkgbuild noarch 1.4.5-1.fc41.copr8184949 copr_base 261.7 KiB R-CRAN-pkgload noarch 1.4.0-1.fc41.copr7689995 copr_base 291.5 KiB R-CRAN-praise noarch 1.0.0-3.fc41.copr7350046 copr_base 24.8 KiB R-CRAN-processx x86_64 3.8.4-1.fc41.copr7353601 copr_base 547.3 KiB R-CRAN-ps x86_64 1.8.1-1.fc41.copr8184952 copr_base 702.6 KiB R-CRAN-rlang x86_64 1.1.4-1.fc41.copr7531082 copr_base 2.6 MiB R-CRAN-rprojroot noarch 2.0.4-1.fc41.copr7349963 copr_base 198.2 KiB R-CRAN-waldo noarch 0.6.1-1.fc41.copr8230116 copr_base 158.2 KiB R-CRAN-withr noarch 3.0.2-1.fc41.copr8184963 copr_base 396.0 KiB R-core-devel x86_64 4.4.2-1.fc41 updates 395.8 KiB R-java x86_64 4.4.2-1.fc41 updates 0.0 B R-java-devel x86_64 4.4.2-1.fc41 updates 0.0 B R-littler x86_64 0.3.19-5.fc41 fedora 158.1 KiB R-rpm-macros noarch 1.2.1-11.fc41 fedora 5.6 KiB abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB alsa-lib x86_64 1.2.13-3.fc41 updates 1.4 MiB annobin-docs noarch 12.69-1.fc41 fedora 97.7 KiB annobin-plugin-gcc x86_64 12.69-1.fc41 fedora 985.0 KiB avahi-libs x86_64 0.8-29.fc41 fedora 166.3 KiB brotli x86_64 1.1.0-5.fc41 fedora 31.8 KiB brotli-devel x86_64 1.1.0-5.fc41 fedora 65.6 KiB bzip2-devel x86_64 1.0.8-19.fc41 fedora 309.8 KiB cairo x86_64 1.18.0-4.fc41 fedora 1.7 MiB cairo-devel x86_64 1.18.0-4.fc41 fedora 2.3 MiB cmake-filesystem x86_64 3.30.5-1.fc41 updates 0.0 B copy-jdk-configs noarch 4.1-6.fc41 fedora 20.3 KiB cpp x86_64 14.2.1-3.fc41 fedora 35.0 MiB cups-filesystem noarch 1:2.4.11-3.fc41 updates 0.0 B cups-libs x86_64 1:2.4.11-3.fc41 updates 622.9 KiB dbus-libs x86_64 1:1.14.10-4.fc41 fedora 368.9 KiB default-fonts-core-sans noarch 4.1-2.fc41 fedora 11.9 KiB desktop-file-utils x86_64 0.27-2.fc41 fedora 230.4 KiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat x86_64 2.6.4-1.fc41 updates 292.9 KiB flexiblas x86_64 3.4.4-3.fc41 fedora 48.5 KiB flexiblas-devel x86_64 3.4.4-3.fc41 fedora 4.8 MiB flexiblas-netlib x86_64 3.4.4-3.fc41 fedora 10.7 MiB flexiblas-netlib64 x86_64 3.4.4-3.fc41 fedora 10.8 MiB flexiblas-openblas-openmp x86_64 3.4.4-3.fc41 fedora 43.3 KiB flexiblas-openblas-openmp64 x86_64 3.4.4-3.fc41 fedora 43.3 KiB fontconfig x86_64 2.15.0-8.fc41 fedora 791.9 KiB fontconfig-devel x86_64 2.15.0-8.fc41 fedora 117.2 KiB fonts-filesystem noarch 1:2.0.5-17.fc41 fedora 0.0 B freetype x86_64 2.13.3-1.fc41 fedora 850.5 KiB freetype-devel x86_64 2.13.3-1.fc41 fedora 8.5 MiB fribidi x86_64 1.0.15-2.fc41 fedora 368.4 KiB gcc x86_64 14.2.1-3.fc41 fedora 104.3 MiB gcc-c++ x86_64 14.2.1-3.fc41 fedora 38.2 MiB gcc-gfortran x86_64 14.2.1-3.fc41 fedora 37.2 MiB gcc-plugin-annobin x86_64 14.2.1-3.fc41 fedora 61.1 KiB gettext x86_64 0.22.5-6.fc41 fedora 5.2 MiB gettext-envsubst x86_64 0.22.5-6.fc41 fedora 74.9 KiB gettext-libs x86_64 0.22.5-6.fc41 fedora 1.7 MiB gettext-runtime x86_64 0.22.5-6.fc41 fedora 481.3 KiB glib2 x86_64 2.82.2-1.fc41 updates 14.7 MiB glib2-devel x86_64 2.82.2-1.fc41 updates 15.7 MiB glibc-devel x86_64 2.40-12.fc41 updates 2.3 MiB gnutls x86_64 3.8.6-7.fc41 fedora 3.2 MiB google-noto-fonts-common noarch 20240701-2.fc41 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240701-2.fc41 fedora 1.2 MiB graphite2 x86_64 1.3.14-16.fc41 fedora 192.0 KiB graphite2-devel x86_64 1.3.14-16.fc41 fedora 49.1 KiB harfbuzz x86_64 9.0.0-3.fc41 fedora 2.6 MiB harfbuzz-cairo x86_64 9.0.0-3.fc41 fedora 48.2 KiB harfbuzz-devel x86_64 9.0.0-3.fc41 fedora 5.1 MiB harfbuzz-icu x86_64 9.0.0-3.fc41 fedora 19.5 KiB java-21-openjdk x86_64 1:21.0.5.0.11-1.fc41 updates 1.1 MiB java-21-openjdk-devel x86_64 1:21.0.5.0.11-1.fc41 updates 11.2 MiB java-21-openjdk-headless x86_64 1:21.0.5.0.11-1.fc41 updates 203.9 MiB javapackages-filesystem noarch 6.2.0-14.fc41 fedora 1.9 KiB jbigkit-libs x86_64 2.1-30.fc41 fedora 117.6 KiB kernel-headers x86_64 6.11.3-300.fc41 fedora 6.4 MiB less x86_64 661-2.fc41 fedora 405.3 KiB libICE x86_64 1.1.1-4.fc41 fedora 181.2 KiB libRmath x86_64 4.4.2-1.fc41 updates 250.8 KiB libRmath-devel x86_64 4.4.2-1.fc41 updates 17.4 KiB libSM x86_64 1.2.4-4.fc41 fedora 97.3 KiB libX11 x86_64 1.8.10-2.fc41 fedora 1.3 MiB libX11-common noarch 1.8.10-2.fc41 fedora 1.1 MiB libX11-devel x86_64 1.8.10-2.fc41 fedora 1.0 MiB libX11-xcb x86_64 1.8.10-2.fc41 fedora 15.0 KiB libXau x86_64 1.0.11-7.fc41 fedora 66.9 KiB libXau-devel x86_64 1.0.11-7.fc41 fedora 6.4 KiB libXcomposite x86_64 0.4.6-4.fc41 fedora 44.5 KiB libXext x86_64 1.3.6-2.fc41 fedora 90.1 KiB libXext-devel x86_64 1.3.6-2.fc41 fedora 98.9 KiB libXft x86_64 2.3.8-7.fc41 fedora 164.5 KiB libXft-devel x86_64 2.3.8-7.fc41 fedora 31.7 KiB libXi x86_64 1.8.2-1.fc41 fedora 76.7 KiB libXmu x86_64 1.2.1-2.fc41 fedora 191.5 KiB libXrender x86_64 0.9.11-7.fc41 fedora 50.1 KiB libXrender-devel x86_64 0.9.11-7.fc41 fedora 50.1 KiB libXt x86_64 1.3.1-1.fc41 updates 429.9 KiB libXtst x86_64 1.2.5-1.fc41 fedora 33.6 KiB libb2 x86_64 0.98.1-12.fc41 fedora 42.2 KiB libblkid-devel x86_64 2.40.2-4.fc41 fedora 44.9 KiB libdatrie x86_64 0.2.13-10.fc41 fedora 57.9 KiB libdeflate x86_64 1.22-2.fc41 fedora 118.1 KiB libdeflate-devel x86_64 1.22-2.fc41 fedora 25.7 KiB libffi-devel x86_64 3.4.6-3.fc41 fedora 33.1 KiB libfontenc x86_64 1.1.8-2.fc41 fedora 67.0 KiB libgfortran x86_64 14.2.1-3.fc41 fedora 3.0 MiB libicu x86_64 74.2-2.fc41 fedora 34.9 MiB libicu-devel x86_64 74.2-2.fc41 fedora 5.6 MiB libjpeg-turbo x86_64 3.0.2-3.fc41 fedora 776.9 KiB liblerc x86_64 4.0.0-7.fc41 fedora 607.5 KiB libmount-devel x86_64 2.40.2-4.fc41 fedora 63.5 KiB libmpc x86_64 1.3.1-6.fc41 fedora 164.7 KiB libpng x86_64 2:1.6.40-4.fc41 fedora 245.8 KiB libpng-devel x86_64 2:1.6.40-4.fc41 fedora 881.5 KiB libquadmath x86_64 14.2.1-3.fc41 fedora 325.9 KiB libquadmath-devel x86_64 14.2.1-3.fc41 fedora 21.9 KiB libselinux-devel x86_64 3.7-5.fc41 fedora 126.4 KiB libsepol-devel x86_64 3.7-2.fc41 fedora 120.3 KiB libstdc++-devel x86_64 14.2.1-3.fc41 fedora 15.4 MiB libtextstyle x86_64 0.22.5-6.fc41 fedora 195.6 KiB libthai x86_64 0.1.29-9.fc41 fedora 783.5 KiB libtiff x86_64 4.6.0-6.fc41 fedora 606.0 KiB libtirpc-devel x86_64 1.3.6-1.fc41 updates 251.6 KiB libwebp x86_64 1.4.0-4.fc41 fedora 822.6 KiB libxcb x86_64 1.17.0-3.fc41 fedora 1.2 MiB libxcb-devel x86_64 1.17.0-3.fc41 fedora 2.7 MiB libxcrypt-devel x86_64 4.4.36-10.fc41 updates 30.5 KiB libxml2-devel x86_64 2.12.8-2.fc41 fedora 3.4 MiB lksctp-tools x86_64 1.0.19-9.fc41 fedora 275.2 KiB lua x86_64 5.4.6-6.fc41 fedora 601.7 KiB lua-posix x86_64 36.2.1-7.fc41 fedora 599.8 KiB make x86_64 1:4.4.1-8.fc41 fedora 1.8 MiB mkfontscale x86_64 1.2.3-1.fc41 fedora 49.2 KiB mpdecimal x86_64 2.5.1-16.fc41 fedora 204.9 KiB nettle x86_64 3.10-3.fc41 fedora 793.0 KiB nspr x86_64 4.35.0-30.fc41 updates 320.4 KiB nss x86_64 3.105.0-1.fc41 updates 1.9 MiB nss-softokn x86_64 3.105.0-1.fc41 updates 1.9 MiB nss-softokn-freebl x86_64 3.105.0-1.fc41 updates 845.1 KiB nss-sysinit x86_64 3.105.0-1.fc41 updates 22.2 KiB nss-util x86_64 3.105.0-1.fc41 updates 205.1 KiB openblas x86_64 0.3.26-5.fc41 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-5.fc41 fedora 39.4 MiB openblas-openmp64 x86_64 0.3.26-5.fc41 fedora 39.5 MiB pango x86_64 1.54.0-2.fc41 fedora 996.2 KiB pcre2-devel x86_64 10.44-1.fc41.1 fedora 2.0 MiB pcre2-utf16 x86_64 10.44-1.fc41.1 fedora 590.1 KiB pcre2-utf32 x86_64 10.44-1.fc41.1 fedora 562.0 KiB pixman x86_64 0.44.0-0.fc41 updates 674.1 KiB pixman-devel x86_64 0.44.0-0.fc41 updates 49.4 KiB python-pip-wheel noarch 24.2-1.fc41 fedora 1.2 MiB python3 x86_64 3.13.0-1.fc41 fedora 31.8 KiB python3-libs x86_64 3.13.0-1.fc41 fedora 40.3 MiB python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB sysprof-capture-devel x86_64 47.1-1.fc41 updates 252.8 KiB tcl x86_64 1:8.6.14-2.fc41 fedora 4.2 MiB tcl-devel x86_64 1:8.6.14-2.fc41 fedora 791.3 KiB tk x86_64 1:8.6.14-2.fc41 fedora 3.6 MiB tk-devel x86_64 1:8.6.14-2.fc41 fedora 984.9 KiB tre x86_64 0.8.0-45.20140228gitc2f5d13.fc41 fedora 75.9 KiB tre-common noarch 0.8.0-45.20140228gitc2f5d13.fc41 fedora 81.0 KiB tre-devel x86_64 0.8.0-45.20140228gitc2f5d13.fc41 fedora 10.7 KiB ttmkfdir x86_64 3.0.9-71.fc41 fedora 122.7 KiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB tzdata-java noarch 2024a-9.fc41 fedora 101.7 KiB xdg-utils noarch 1.2.1-2.fc41 fedora 346.3 KiB xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-39.fc41 fedora 863.3 KiB xorg-x11-proto-devel noarch 2024.1-3.fc41 fedora 1.7 MiB xz-devel x86_64 1:5.6.2-2.fc41 fedora 255.6 KiB zlib-ng-compat-devel x86_64 2.1.7-3.fc41 fedora 106.8 KiB Transaction Summary: Installing: 187 packages Total size of inbound packages is 290 MiB. Need to download 290 MiB. After this operation, 903 MiB extra will be used (install 903 MiB, remove 0 B). [ 1/187] R-CRAN-Rcpp-0:1.0.13.1-1.fc41 100% | 11.2 MiB/s | 2.0 MiB | 00m00s [ 2/187] R-devel-0:4.4.2-1.fc41.x86_64 100% | 174.9 KiB/s | 9.3 KiB | 00m00s [ 3/187] R-CRAN-Matrix-0:1.7.1-1.fc41. 100% | 18.3 MiB/s | 4.4 MiB | 00m00s [ 4/187] R-CRAN-testthat-0:3.2.1.1-1.f 100% | 5.9 MiB/s | 1.6 MiB | 00m00s [ 5/187] R-CRAN-lattice-0:0.22.6-1.fc4 100% | 33.2 MiB/s | 1.4 MiB | 00m00s [ 6/187] R-littler-0:0.3.19-5.fc41.x86 100% | 341.0 KiB/s | 71.3 KiB | 00m00s [ 7/187] R-CRAN-R6-0:2.5.1-1.fc41.copr 100% | 9.3 MiB/s | 95.5 KiB | 00m00s [ 8/187] R-CRAN-brio-0:1.1.5-1.fc41.co 100% | 4.5 MiB/s | 50.2 KiB | 00m00s [ 9/187] R-CRAN-callr-0:3.7.6-1.fc41.c 100% | 5.2 MiB/s | 441.2 KiB | 00m00s [ 10/187] flexiblas-netlib-0:3.4.4-3.fc 100% | 8.0 MiB/s | 3.2 MiB | 00m00s [ 11/187] R-CRAN-desc-0:1.4.3-1.fc41.co 100% | 19.1 MiB/s | 351.3 KiB | 00m00s [ 12/187] R-CRAN-digest-0:0.6.37-1.fc41 100% | 12.5 MiB/s | 229.7 KiB | 00m00s [ 13/187] R-CRAN-cli-0:3.6.3-1.fc41.cop 100% | 19.7 MiB/s | 1.3 MiB | 00m00s [ 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Finish: build setup for R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm Start: rpmbuild R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.AYmgge + umask 022 + cd /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + test -d /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + /usr/bin/rm -rf /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.AsDuQW + umask 022 + cd /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + cd /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + rm -rf clustur + /usr/bin/mkdir -p clustur + cd clustur + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/clustur_0.1.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d clustur/src ']' + find clustur/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d clustur/src ']' + find 'clustur/src/Make*' -type f -exec sed -i s@-g0@@g '{}' ';' find: ‘clustur/src/Make*’: No such file or directory + true + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.EEukZd + umask 022 + cd /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd clustur + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Qt3PhH + umask 022 + cd /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + '[' /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + mkdir /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd clustur + mkdir -p /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT/usr/local/lib/R/library clustur * installing *source* package ‘clustur’ ... ** package ‘clustur’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c AverageLinkage.cpp -o AverageLinkage.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Cluster.cpp -o Cluster.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ClusterCommand.cpp -o ClusterCommand.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ClusterData.cpp -o ClusterData.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ClusterDataTestFixture.cpp -o ClusterDataTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ClusterExportTestFixture.cpp -o ClusterExportTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ClusterTestFixture.cpp -o ClusterTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ColumnDistanceMatrixReader.cpp -o ColumnDistanceMatrixReader.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ColumnReaderTestFixture.cpp -o ColumnReaderTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c CompleteLinkage.cpp -o CompleteLinkage.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c CountTableAdapter.cpp -o CountTableAdapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c CountTableAdapterTestFixture.cpp -o CountTableAdapterTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c DataFrameAdapter.cpp -o DataFrameAdapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c DataFrameAdapterTestFixture.cpp -o DataFrameAdapterTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c DistanceFileReader.cpp -o DistanceFileReader.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ListVector.cpp -o ListVector.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ListVectorTestFixture.cpp -o ListVectorTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c MatrixAdapter.cpp -o MatrixAdapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c MatrixAdapterTestFixture.cpp -o MatrixAdapterTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptiCluster.cpp -o OptiCluster.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptiClusterDataTestFixture.cpp -o OptiClusterDataTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptiClusterTestFixture.cpp -o OptiClusterTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptiData.cpp -o OptiData.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptiDataTestFixture.cpp -o OptiDataTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptiMatrix.cpp -o OptiMatrix.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OpticlusterData.cpp -o OpticlusterData.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptimatrixAdapter.cpp -o OptimatrixAdapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c OptimatrixAdapterTestFixture.cpp -o OptimatrixAdapterTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c PhylipReaderTestFixture.cpp -o PhylipReaderTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RAbundVector.cpp -o RAbundVector.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RAbundVectorTestFixture.cpp -o RAbundVectorTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ReadPhylipMatrix.cpp -o ReadPhylipMatrix.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SharedFile.cpp -o SharedFile.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SharedFileBuilder.cpp -o SharedFileBuilder.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SharedFileBuilderTestFixture.cpp -o SharedFileBuilderTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SharedFileTestFixture.cpp -o SharedFileTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SingleLinkage.cpp -o SingleLinkage.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SparseDistanceMatrix.cpp -o SparseDistanceMatrix.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SparseMatrixTestFixture.cpp -o SparseMatrixTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Utils.cpp -o Utils.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c UtilsTestFixture.cpp -o UtilsTestFixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c WeightedLinkage.cpp -o WeightedLinkage.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c main.cpp -o main.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-Cluster_Data.cpp -o test-Cluster_Data.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-OptiCluster_data.cpp -o test-OptiCluster_data.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-Shared_File.cpp -o test-Shared_File.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-Shared_File_Builder.cpp -o test-Shared_File_Builder.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-cluster.cpp -o test-cluster.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-cluster_export.cpp -o test-cluster_export.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-column_reader_test_fixture.cpp -o test-column_reader_test_fixture.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-count_table_adapter.cpp -o test-count_table_adapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-data_frame_adapter.cpp -o test-data_frame_adapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-list-vector.cpp -o test-list-vector.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-matrix_adapter.cpp -o test-matrix_adapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-opticluster.cpp -o test-opticluster.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-optidata.cpp -o test-optidata.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-optimatrix-adapter.cpp -o test-optimatrix-adapter.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-rabund_vector.cpp -o test-rabund_vector.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-read_phylip.cpp -o test-read_phylip.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-runner.cpp -o test-runner.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-sparse_matrix.cpp -o test-sparse_matrix.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-utils.cpp -o test-utils.o g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o clustur.so AverageLinkage.o Cluster.o ClusterCommand.o ClusterData.o ClusterDataTestFixture.o ClusterExportTestFixture.o ClusterTestFixture.o ColumnDistanceMatrixReader.o ColumnReaderTestFixture.o CompleteLinkage.o CountTableAdapter.o CountTableAdapterTestFixture.o DataFrameAdapter.o DataFrameAdapterTestFixture.o DistanceFileReader.o ListVector.o ListVectorTestFixture.o MatrixAdapter.o MatrixAdapterTestFixture.o OptiCluster.o OptiClusterDataTestFixture.o OptiClusterTestFixture.o OptiData.o OptiDataTestFixture.o OptiMatrix.o OpticlusterData.o OptimatrixAdapter.o OptimatrixAdapterTestFixture.o PhylipReaderTestFixture.o RAbundVector.o RAbundVectorTestFixture.o RcppExports.o ReadPhylipMatrix.o SharedFile.o SharedFileBuilder.o SharedFileBuilderTestFixture.o SharedFileTestFixture.o SingleLinkage.o SparseDistanceMatrix.o SparseMatrixTestFixture.o Utils.o UtilsTestFixture.o WeightedLinkage.o main.o test-Cluster_Data.o test-OptiCluster_data.o test-Shared_File.o test-Shared_File_Builder.o test-cluster.o test-cluster_export.o test-column_reader_test_fixture.o test-count_table_adapter.o test-data_frame_adapter.o test-list-vector.o test-matrix_adapter.o test-opticluster.o test-optidata.o test-optimatrix-adapter.o test-rabund_vector.o test-read_phylip.o test-runner.o test-sparse_matrix.o test-utils.o -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT/usr/local/lib/R/library/00LOCK-clustur/00new/clustur/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘clustur’ finding HTML links ... done cluster html clustur-package html create_sparse_matrix html example_path html get_abundance html get_bins html get_count_table html get_cutoff html get_distance_df html get_metrics html read_count html read_dist html split_clusters_to_list html validate_count_table html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clustur) + test -d clustur/src + cd clustur/src + rm -f AverageLinkage.o Cluster.o ClusterCommand.o ClusterData.o ClusterDataTestFixture.o ClusterExportTestFixture.o ClusterTestFixture.o ColumnDistanceMatrixReader.o ColumnReaderTestFixture.o CompleteLinkage.o CountTableAdapter.o CountTableAdapterTestFixture.o DataFrameAdapter.o DataFrameAdapterTestFixture.o DistanceFileReader.o ListVector.o ListVectorTestFixture.o MatrixAdapter.o MatrixAdapterTestFixture.o OptiCluster.o OptiClusterDataTestFixture.o OptiClusterTestFixture.o OptiData.o OptiDataTestFixture.o OptiMatrix.o OpticlusterData.o OptimatrixAdapter.o OptimatrixAdapterTestFixture.o PhylipReaderTestFixture.o RAbundVector.o RAbundVectorTestFixture.o RcppExports.o ReadPhylipMatrix.o SharedFile.o SharedFileBuilder.o SharedFileBuilderTestFixture.o SharedFileTestFixture.o SingleLinkage.o SparseDistanceMatrix.o SparseMatrixTestFixture.o Utils.o UtilsTestFixture.o WeightedLinkage.o main.o test-Cluster_Data.o test-OptiCluster_data.o test-Shared_File.o test-Shared_File_Builder.o test-cluster.o test-cluster_export.o test-column_reader_test_fixture.o test-count_table_adapter.o test-data_frame_adapter.o test-list-vector.o test-matrix_adapter.o test-opticluster.o test-optidata.o test-optimatrix-adapter.o test-rabund_vector.o test-read_phylip.o test-runner.o test-sparse_matrix.o test-utils.o clustur.so + rm -f /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT/usr/local/lib/R/library/R.css + find /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.1.1-1.fc41.copr8313366 --unique-debug-suffix -0.1.1-1.fc41.copr8313366.x86_64 --unique-debug-src-base R-CRAN-clustur-0.1.1-1.fc41.copr8313366.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/clustur find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-clustur-0.1.1-1.fc41.copr8313366.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT Scanned 32 directories and 186 files, processed 32 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/SPECPARTS/rpm-debuginfo.specpart Processing files: R-CRAN-clustur-0.1.1-1.fc41.copr8313366.x86_64 Provides: R-CRAN-clustur = 0.1.1-1.fc41.copr8313366 R-CRAN-clustur(x86-64) = 0.1.1-1.fc41.copr8313366 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-clustur-debugsource-0.1.1-1.fc41.copr8313366.x86_64 Provides: R-CRAN-clustur-debugsource = 0.1.1-1.fc41.copr8313366 R-CRAN-clustur-debugsource(x86-64) = 0.1.1-1.fc41.copr8313366 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-clustur-debuginfo-0.1.1-1.fc41.copr8313366.x86_64 Provides: R-CRAN-clustur-debuginfo = 0.1.1-1.fc41.copr8313366 R-CRAN-clustur-debuginfo(x86-64) = 0.1.1-1.fc41.copr8313366 debuginfo(build-id) = db70305081aba596ca422f7641241c374014c799 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-clustur-debugsource(x86-64) = 0.1.1-1.fc41.copr8313366 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build/BUILDROOT Wrote: /builddir/build/RPMS/R-CRAN-clustur-0.1.1-1.fc41.copr8313366.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-clustur-debugsource-0.1.1-1.fc41.copr8313366.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-clustur-debuginfo-0.1.1-1.fc41.copr8313366.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.MkONqF + umask 022 + cd /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + test -d /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + rm -rf /builddir/build/BUILD/R-CRAN-clustur-0.1.1-build + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm Finish: build phase for R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1732585644.956362/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-clustur-0.1.1-1.fc41.copr8313366.src.rpm) Config(child) 3 minutes 45 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-clustur", "epoch": null, "version": "0.1.1", "release": "1.fc41.copr8313366", "arch": "x86_64" }, { "name": "R-CRAN-clustur-debuginfo", "epoch": null, "version": "0.1.1", "release": "1.fc41.copr8313366", "arch": "x86_64" }, { "name": "R-CRAN-clustur-debugsource", "epoch": null, "version": "0.1.1", "release": "1.fc41.copr8313366", "arch": "x86_64" }, { "name": "R-CRAN-clustur", "epoch": null, "version": "0.1.1", "release": "1.fc41.copr8313366", "arch": "src" } ] } RPMResults finished