plot_regulator_network {scregclust} | R Documentation |
Plotting the regulatory table from scregclust as a directed graph
Description
Plotting the regulatory table from scregclust as a directed graph
Usage
plot_regulator_network(
output,
arrow_size = 0.3,
edge_scaling = 30,
no_links = 6,
col = c("gray80", "#FC7165", "#BD828C", "#9D8A9F", "#7D92B2", "#BDA88C", "#FCBD65",
"#F2BB90", "#E7B9BA", "#BDB69C", "#92B27D", "#9B8BA5", "#9D7DB2", "#94A5BF")
)
Arguments
output |
Object of type |
arrow_size |
Size of arrow head |
edge_scaling |
Scaling factor for edge width |
no_links |
Threshold value (0-10) for number of edges to show, higher value = more stringent threshold = less edges |
col |
color |
Value
Graph with gene modules and regulators as nodes
[Package scregclust version 0.2.0 Index]