scregclust_format {scregclust} | R Documentation |
Package data before clustering
Description
Package data before clustering
Usage
scregclust_format(expression_matrix, mode = c("TF", "kinase"))
Arguments
expression_matrix |
The p x n gene expression matrix with gene symbols as rownames. |
mode |
Determines which genes are considered to be regulators. |
Value
A list with
genesymbols |
The gene symbols extracted from the expression matrix |
sample_assignment |
A vector filled with |
is_regulator |
Whether a gene is considered to be a regulator or not,
determined dependent on |
See Also
[Package scregclust version 0.2.0 Index]