Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c15a' (ED25519) to the list of known hosts. Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-owe0d_hg/R-CRAN-bbknnR/R-CRAN-bbknnR.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-owe0d_hg/R-CRAN-bbknnR --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1757475103.274347 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.3 starting (python version = 3.13.5, NVR = mock-6.3-1.fc42), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-owe0d_hg/R-CRAN-bbknnR/R-CRAN-bbknnR.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-owe0d_hg/R-CRAN-bbknnR --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1757475103.274347 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-owe0d_hg/R-CRAN-bbknnR/R-CRAN-bbknnR.spec) Config(fedora-42-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.3 INFO: Mock Version: 6.3 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-42-x86_64-1757475103.274347/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.1-1.fc42.x86_64 rpm-sequoia-1.7.0-5.fc42.x86_64 python3-dnf-4.23.0-1.fc42.noarch python3-dnf-plugins-core-4.10.1-1.fc42.noarch dnf5-5.2.16.0-1.fc42.x86_64 dnf5-plugins-5.2.16.0-1.fc42.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: Copr repository 100% | 39.4 MiB/s | 12.8 MiB | 00m00s fedora 100% | 21.0 MiB/s | 35.4 MiB | 00m02s updates 100% | 6.4 MiB/s | 10.7 MiB | 00m02s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.37-1.fc42 fedora 8.2 MiB bzip2 x86_64 1.0.8-20.fc42 fedora 99.3 KiB coreutils x86_64 9.6-5.fc42 updates 5.4 MiB cpio x86_64 2.15-4.fc42 fedora 1.1 MiB diffutils x86_64 3.12-1.fc42 updates 1.6 MiB fedora-release-common noarch 42-30 updates 20.2 KiB findutils x86_64 1:4.10.0-5.fc42 fedora 1.9 MiB gawk x86_64 5.3.1-1.fc42 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.41-11.fc42 updates 0.0 B grep x86_64 3.11-10.fc42 fedora 1.0 MiB gzip x86_64 1.13-3.fc42 fedora 392.9 KiB info x86_64 7.2-3.fc42 fedora 357.9 KiB patch x86_64 2.8-1.fc42 updates 222.8 KiB redhat-rpm-config noarch 342-4.fc42 updates 185.5 KiB rpm-build x86_64 4.20.1-1.fc42 fedora 168.7 KiB sed x86_64 4.9-4.fc42 fedora 857.3 KiB shadow-utils x86_64 2:4.17.4-1.fc42 fedora 4.0 MiB tar x86_64 2:1.35-5.fc42 fedora 3.0 MiB unzip x86_64 6.0-66.fc42 fedora 390.3 KiB util-linux x86_64 2.40.4-7.fc42 fedora 3.4 MiB which x86_64 2.23-2.fc42 updates 83.5 KiB xz x86_64 1:5.8.1-2.fc42 updates 1.3 MiB Installing dependencies: add-determinism x86_64 0.6.0-1.fc42 fedora 2.5 MiB alternatives x86_64 1.33-1.fc42 updates 62.2 KiB ansible-srpm-macros noarch 1-17.1.fc42 fedora 35.7 KiB audit-libs x86_64 4.1.1-1.fc42 updates 378.8 KiB basesystem noarch 11-22.fc42 fedora 0.0 B binutils x86_64 2.44-6.fc42 updates 25.8 MiB build-reproducibility-srpm-macros noarch 0.6.0-1.fc42 fedora 735.0 B bzip2-libs x86_64 1.0.8-20.fc42 fedora 84.6 KiB ca-certificates noarch 2025.2.80_v9.0.304-1.0.fc42 updates 2.7 MiB coreutils-common x86_64 9.6-5.fc42 updates 11.1 MiB crypto-policies noarch 20250707-1.gitad370a8.fc42 updates 142.9 KiB curl x86_64 8.11.1-5.fc42 updates 450.7 KiB cyrus-sasl-lib x86_64 2.1.28-30.fc42 fedora 2.3 MiB debugedit x86_64 5.1-7.fc42 updates 192.7 KiB dwz x86_64 0.16-1.fc42 updates 287.1 KiB ed x86_64 1.21-2.fc42 fedora 146.5 KiB efi-srpm-macros noarch 6-3.fc42 updates 40.1 KiB elfutils x86_64 0.193-2.fc42 updates 2.9 MiB elfutils-debuginfod-client x86_64 0.193-2.fc42 updates 83.9 KiB elfutils-default-yama-scope noarch 0.193-2.fc42 updates 1.8 KiB elfutils-libelf x86_64 0.193-2.fc42 updates 1.2 MiB elfutils-libs x86_64 0.193-2.fc42 updates 683.4 KiB fedora-gpg-keys noarch 42-1 fedora 128.2 KiB fedora-release noarch 42-30 updates 0.0 B fedora-release-identity-basic noarch 42-30 updates 646.0 B fedora-repos noarch 42-1 fedora 4.9 KiB file x86_64 5.46-3.fc42 updates 100.2 KiB file-libs x86_64 5.46-3.fc42 updates 11.9 MiB filesystem x86_64 3.18-47.fc42 updates 112.0 B filesystem-srpm-macros noarch 3.18-47.fc42 updates 38.2 KiB fonts-srpm-macros noarch 1:2.0.5-22.fc42 updates 55.8 KiB forge-srpm-macros noarch 0.4.0-2.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-14.fc42 fedora 144.0 B gdb-minimal x86_64 16.3-1.fc42 updates 13.2 MiB gdbm-libs x86_64 1:1.23-9.fc42 fedora 129.9 KiB ghc-srpm-macros noarch 1.9.2-2.fc42 fedora 779.0 B glibc x86_64 2.41-11.fc42 updates 6.6 MiB glibc-common x86_64 2.41-11.fc42 updates 1.0 MiB glibc-gconv-extra x86_64 2.41-11.fc42 updates 7.2 MiB gmp x86_64 1:6.3.0-4.fc42 fedora 811.3 KiB gnat-srpm-macros noarch 6-7.fc42 fedora 1.0 KiB go-srpm-macros noarch 3.8.0-1.fc42 updates 61.9 KiB jansson x86_64 2.14-2.fc42 fedora 93.1 KiB json-c x86_64 0.18-2.fc42 fedora 86.7 KiB kernel-srpm-macros noarch 1.0-25.fc42 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-5.fc42 fedora 58.3 KiB krb5-libs x86_64 1.21.3-6.fc42 updates 2.3 MiB libacl x86_64 2.3.2-3.fc42 fedora 38.3 KiB libarchive x86_64 3.8.1-1.fc42 updates 955.2 KiB libattr x86_64 2.5.2-5.fc42 fedora 27.1 KiB libblkid x86_64 2.40.4-7.fc42 fedora 262.4 KiB libbrotli x86_64 1.1.0-6.fc42 fedora 841.3 KiB libcap x86_64 2.73-2.fc42 fedora 207.1 KiB libcap-ng x86_64 0.8.5-4.fc42 fedora 72.9 KiB libcom_err x86_64 1.47.2-3.fc42 fedora 67.1 KiB libcurl x86_64 8.11.1-5.fc42 updates 834.0 KiB libeconf x86_64 0.7.6-2.fc42 updates 64.6 KiB libevent x86_64 2.1.12-15.fc42 fedora 903.1 KiB libfdisk x86_64 2.40.4-7.fc42 fedora 372.3 KiB libffi x86_64 3.4.6-5.fc42 fedora 82.3 KiB libgcc x86_64 15.2.1-1.fc42 updates 266.6 KiB libgomp x86_64 15.2.1-1.fc42 updates 541.1 KiB libidn2 x86_64 2.3.8-1.fc42 fedora 556.5 KiB libmount x86_64 2.40.4-7.fc42 fedora 356.3 KiB libnghttp2 x86_64 1.64.0-3.fc42 fedora 170.4 KiB libpkgconf x86_64 2.3.0-2.fc42 fedora 78.1 KiB libpsl x86_64 0.21.5-5.fc42 fedora 76.4 KiB libselinux x86_64 3.8-2.fc42 updates 193.1 KiB libsemanage x86_64 3.8.1-2.fc42 updates 304.4 KiB libsepol x86_64 3.8-1.fc42 fedora 826.0 KiB libsmartcols x86_64 2.40.4-7.fc42 fedora 180.4 KiB libssh x86_64 0.11.2-1.fc42 updates 566.7 KiB libssh-config noarch 0.11.2-1.fc42 updates 277.0 B libstdc++ x86_64 15.2.1-1.fc42 updates 2.8 MiB libtasn1 x86_64 4.20.0-1.fc42 fedora 176.3 KiB libtool-ltdl x86_64 2.5.4-4.fc42 fedora 70.1 KiB libunistring x86_64 1.1-9.fc42 fedora 1.7 MiB libuuid x86_64 2.40.4-7.fc42 fedora 37.3 KiB libverto x86_64 0.3.2-10.fc42 fedora 25.4 KiB libxcrypt x86_64 4.4.38-7.fc42 updates 284.5 KiB libxml2 x86_64 2.12.10-1.fc42 fedora 1.7 MiB libzstd x86_64 1.5.7-1.fc42 fedora 807.8 KiB lua-libs x86_64 5.4.8-1.fc42 updates 280.8 KiB lua-srpm-macros noarch 1-15.fc42 fedora 1.3 KiB lz4-libs x86_64 1.10.0-2.fc42 fedora 157.4 KiB mpfr x86_64 4.2.2-1.fc42 fedora 828.8 KiB ncurses-base noarch 6.5-5.20250125.fc42 fedora 326.8 KiB ncurses-libs x86_64 6.5-5.20250125.fc42 fedora 946.3 KiB ocaml-srpm-macros noarch 10-4.fc42 fedora 1.9 KiB openblas-srpm-macros noarch 2-19.fc42 fedora 112.0 B openldap x86_64 2.6.10-1.fc42 updates 655.8 KiB openssl-libs x86_64 1:3.2.4-4.fc42 updates 7.8 MiB p11-kit x86_64 0.25.5-6.fc42 updates 2.2 MiB p11-kit-trust x86_64 0.25.5-6.fc42 updates 395.5 KiB package-notes-srpm-macros noarch 0.5-13.fc42 fedora 1.6 KiB pam-libs x86_64 1.7.0-6.fc42 updates 126.7 KiB pcre2 x86_64 10.45-1.fc42 fedora 697.7 KiB pcre2-syntax noarch 10.45-1.fc42 fedora 273.9 KiB perl-srpm-macros noarch 1-57.fc42 fedora 861.0 B pkgconf x86_64 2.3.0-2.fc42 fedora 88.5 KiB pkgconf-m4 noarch 2.3.0-2.fc42 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-2.fc42 fedora 989.0 B popt x86_64 1.19-8.fc42 fedora 132.8 KiB publicsuffix-list-dafsa noarch 20250616-1.fc42 updates 69.1 KiB pyproject-srpm-macros noarch 1.18.3-1.fc42 updates 1.9 KiB python-srpm-macros noarch 3.13-5.fc42 updates 51.0 KiB qt5-srpm-macros noarch 5.15.17-1.fc42 updates 500.0 B qt6-srpm-macros noarch 6.9.1-1.fc42 updates 464.0 B readline x86_64 8.2-13.fc42 fedora 485.0 KiB rpm x86_64 4.20.1-1.fc42 fedora 3.1 MiB rpm-build-libs x86_64 4.20.1-1.fc42 fedora 206.6 KiB rpm-libs x86_64 4.20.1-1.fc42 fedora 721.8 KiB rpm-sequoia x86_64 1.7.0-5.fc42 fedora 2.4 MiB rust-srpm-macros noarch 26.4-1.fc42 updates 4.8 KiB setup noarch 2.15.0-13.fc42 fedora 720.9 KiB sqlite-libs x86_64 3.47.2-2.fc42 fedora 1.5 MiB systemd-libs x86_64 257.9-2.fc42 updates 2.2 MiB systemd-standalone-sysusers x86_64 257.9-2.fc42 updates 277.3 KiB tree-sitter-srpm-macros noarch 0.1.0-8.fc42 fedora 6.5 KiB util-linux-core x86_64 2.40.4-7.fc42 fedora 1.4 MiB xxhash-libs x86_64 0.8.3-2.fc42 fedora 90.2 KiB xz-libs x86_64 1:5.8.1-2.fc42 updates 217.8 KiB zig-srpm-macros noarch 1-4.fc42 fedora 1.1 KiB zip x86_64 3.0-43.fc42 fedora 698.5 KiB zlib-ng-compat x86_64 2.2.5-2.fc42 updates 137.6 KiB zstd x86_64 1.5.7-1.fc42 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 148 packages Total size of inbound packages is 52 MiB. Need to download 52 MiB. After this operation, 177 MiB extra will be used (install 177 MiB, remove 0 B). [ 1/148] bzip2-0:1.0.8-20.fc42.x86_64 100% | 333.8 KiB/s | 52.1 KiB | 00m00s [ 2/148] cpio-0:2.15-4.fc42.x86_64 100% | 1.2 MiB/s | 294.6 KiB | 00m00s [ 3/148] grep-0:3.11-10.fc42.x86_64 100% | 5.7 MiB/s | 300.1 KiB | 00m00s [ 4/148] findutils-1:4.10.0-5.fc42.x86 100% | 4.0 MiB/s | 551.5 KiB | 00m00s [ 5/148] bash-0:5.2.37-1.fc42.x86_64 100% | 5.7 MiB/s | 1.8 MiB | 00m00s [ 6/148] info-0:7.2-3.fc42.x86_64 100% | 5.0 MiB/s | 183.8 KiB | 00m00s [ 7/148] gzip-0:1.13-3.fc42.x86_64 100% | 4.2 MiB/s | 170.4 KiB | 00m00s [ 8/148] rpm-build-0:4.20.1-1.fc42.x86 100% | 2.6 MiB/s | 81.8 KiB | 00m00s [ 9/148] sed-0:4.9-4.fc42.x86_64 100% | 7.4 MiB/s | 317.3 KiB | 00m00s [ 10/148] tar-2:1.35-5.fc42.x86_64 100% | 20.5 MiB/s | 862.5 KiB | 00m00s [ 11/148] unzip-0:6.0-66.fc42.x86_64 100% | 5.0 MiB/s | 184.6 KiB | 00m00s [ 12/148] shadow-utils-2:4.17.4-1.fc42. 100% | 13.5 MiB/s | 1.3 MiB | 00m00s [ 13/148] fedora-release-common-0:42-30 100% | 556.6 KiB/s | 24.5 KiB | 00m00s [ 14/148] diffutils-0:3.12-1.fc42.x86_6 100% | 3.7 MiB/s | 392.6 KiB | 00m00s [ 15/148] gawk-0:5.3.1-1.fc42.x86_64 100% | 23.5 MiB/s | 1.1 MiB | 00m00s [ 16/148] coreutils-0:9.6-5.fc42.x86_64 100% | 8.8 MiB/s | 1.1 MiB | 00m00s [ 17/148] redhat-rpm-config-0:342-4.fc4 100% | 5.3 MiB/s | 81.1 KiB | 00m00s [ 18/148] util-linux-0:2.40.4-7.fc42.x8 100% | 25.7 MiB/s | 1.2 MiB | 00m00s [ 19/148] which-0:2.23-2.fc42.x86_64 100% | 2.9 MiB/s | 41.7 KiB | 00m00s [ 20/148] xz-1:5.8.1-2.fc42.x86_64 100% | 26.6 MiB/s | 572.6 KiB | 00m00s [ 21/148] glibc-minimal-langpack-0:2.41 100% | 914.3 KiB/s | 98.7 KiB | 00m00s [ 22/148] patch-0:2.8-1.fc42.x86_64 100% | 886.7 KiB/s | 113.5 KiB | 00m00s [ 23/148] bzip2-libs-0:1.0.8-20.fc42.x8 100% | 1.3 MiB/s | 43.6 KiB | 00m00s [ 24/148] ncurses-libs-0:6.5-5.20250125 100% | 9.6 MiB/s | 335.0 KiB | 00m00s [ 25/148] pcre2-0:10.45-1.fc42.x86_64 100% | 7.5 MiB/s | 262.8 KiB | 00m00s [ 26/148] popt-0:1.19-8.fc42.x86_64 100% | 2.0 MiB/s | 65.9 KiB | 00m00s [ 27/148] readline-0:8.2-13.fc42.x86_64 100% | 6.4 MiB/s | 215.2 KiB | 00m00s [ 28/148] rpm-build-libs-0:4.20.1-1.fc4 100% | 3.0 MiB/s | 99.7 KiB | 00m00s [ 29/148] rpm-0:4.20.1-1.fc42.x86_64 100% | 13.7 MiB/s | 548.4 KiB | 00m00s [ 30/148] rpm-libs-0:4.20.1-1.fc42.x86_ 100% | 8.7 MiB/s | 312.0 KiB | 00m00s [ 31/148] libacl-0:2.3.2-3.fc42.x86_64 100% | 766.9 KiB/s | 23.0 KiB | 00m00s [ 32/148] setup-0:2.15.0-13.fc42.noarch 100% | 4.8 MiB/s | 155.8 KiB | 00m00s [ 33/148] zstd-0:1.5.7-1.fc42.x86_64 100% | 9.9 MiB/s | 485.9 KiB | 00m00s [ 34/148] libattr-0:2.5.2-5.fc42.x86_64 100% | 551.1 KiB/s | 17.1 KiB | 00m00s [ 35/148] gmp-1:6.3.0-4.fc42.x86_64 100% | 9.1 MiB/s | 317.7 KiB | 00m00s [ 36/148] libcap-0:2.73-2.fc42.x86_64 100% | 2.5 MiB/s | 84.3 KiB | 00m00s [ 37/148] fedora-repos-0:42-1.noarch 100% | 297.6 KiB/s | 9.2 KiB | 00m00s [ 38/148] coreutils-common-0:9.6-5.fc42 100% | 57.9 MiB/s | 2.1 MiB | 00m00s [ 39/148] glibc-common-0:2.41-11.fc42.x 100% | 15.1 MiB/s | 385.6 KiB | 00m00s [ 40/148] mpfr-0:4.2.2-1.fc42.x86_64 100% | 7.7 MiB/s | 345.3 KiB | 00m00s [ 41/148] ed-0:1.21-2.fc42.x86_64 100% | 2.6 MiB/s | 82.0 KiB | 00m00s [ 42/148] ansible-srpm-macros-0:1-17.1. 100% | 677.1 KiB/s | 20.3 KiB | 00m00s [ 43/148] build-reproducibility-srpm-ma 100% | 389.5 KiB/s | 11.7 KiB | 00m00s [ 44/148] forge-srpm-macros-0:0.4.0-2.f 100% | 661.7 KiB/s | 19.9 KiB | 00m00s [ 45/148] fpc-srpm-macros-0:1.3-14.fc42 100% | 267.3 KiB/s | 8.0 KiB | 00m00s [ 46/148] ghc-srpm-macros-0:1.9.2-2.fc4 100% | 305.2 KiB/s | 9.2 KiB | 00m00s [ 47/148] gnat-srpm-macros-0:6-7.fc42.n 100% | 287.0 KiB/s | 8.6 KiB | 00m00s [ 48/148] kernel-srpm-macros-0:1.0-25.f 100% | 329.0 KiB/s | 9.9 KiB | 00m00s [ 49/148] lua-srpm-macros-0:1-15.fc42.n 100% | 297.2 KiB/s | 8.9 KiB | 00m00s [ 50/148] ocaml-srpm-macros-0:10-4.fc42 100% | 296.9 KiB/s | 9.2 KiB | 00m00s [ 51/148] openblas-srpm-macros-0:2-19.f 100% | 258.9 KiB/s | 7.8 KiB | 00m00s [ 52/148] package-notes-srpm-macros-0:0 100% | 308.7 KiB/s | 9.3 KiB | 00m00s [ 53/148] perl-srpm-macros-0:1-57.fc42. 100% | 283.5 KiB/s | 8.5 KiB | 00m00s [ 54/148] zig-srpm-macros-0:1-4.fc42.no 100% | 274.8 KiB/s | 8.2 KiB | 00m00s [ 55/148] tree-sitter-srpm-macros-0:0.1 100% | 362.3 KiB/s | 11.2 KiB | 00m00s [ 56/148] zip-0:3.0-43.fc42.x86_64 100% | 7.8 MiB/s | 263.5 KiB | 00m00s [ 57/148] libcap-ng-0:0.8.5-4.fc42.x86_ 100% | 1.0 MiB/s | 32.2 KiB | 00m00s [ 58/148] libblkid-0:2.40.4-7.fc42.x86_ 100% | 3.5 MiB/s | 122.5 KiB | 00m00s [ 59/148] libfdisk-0:2.40.4-7.fc42.x86_ 100% | 4.8 MiB/s | 158.5 KiB | 00m00s [ 60/148] libmount-0:2.40.4-7.fc42.x86_ 100% | 4.7 MiB/s | 155.1 KiB | 00m00s [ 61/148] libsmartcols-0:2.40.4-7.fc42. 100% | 2.4 MiB/s | 81.2 KiB | 00m00s [ 62/148] libuuid-0:2.40.4-7.fc42.x86_6 100% | 844.6 KiB/s | 25.3 KiB | 00m00s [ 63/148] xz-libs-1:5.8.1-2.fc42.x86_64 100% | 7.4 MiB/s | 113.0 KiB | 00m00s [ 64/148] util-linux-core-0:2.40.4-7.fc 100% | 13.6 MiB/s | 529.2 KiB | 00m00s [ 65/148] ncurses-base-0:6.5-5.20250125 100% | 2.8 MiB/s | 88.1 KiB | 00m00s [ 66/148] pcre2-syntax-0:10.45-1.fc42.n 100% | 4.5 MiB/s | 161.7 KiB | 00m00s [ 67/148] libzstd-0:1.5.7-1.fc42.x86_64 100% | 8.3 MiB/s | 314.8 KiB | 00m00s [ 68/148] rpm-sequoia-0:1.7.0-5.fc42.x8 100% | 21.7 MiB/s | 911.1 KiB | 00m00s [ 69/148] lz4-libs-0:1.10.0-2.fc42.x86_ 100% | 2.5 MiB/s | 78.1 KiB | 00m00s [ 70/148] sqlite-libs-0:3.47.2-2.fc42.x 100% | 12.8 MiB/s | 734.8 KiB | 00m00s [ 71/148] fedora-gpg-keys-0:42-1.noarch 100% | 4.1 MiB/s | 135.6 KiB | 00m00s [ 72/148] add-determinism-0:0.6.0-1.fc4 100% | 16.9 MiB/s | 918.3 KiB | 00m00s [ 73/148] glibc-gconv-extra-0:2.41-11.f 100% | 27.8 MiB/s | 1.6 MiB | 00m00s [ 74/148] glibc-0:2.41-11.fc42.x86_64 100% | 31.2 MiB/s | 2.2 MiB | 00m00s [ 75/148] basesystem-0:11-22.fc42.noarc 100% | 243.0 KiB/s | 7.3 KiB | 00m00s [ 76/148] dwz-0:0.16-1.fc42.x86_64 100% | 8.8 MiB/s | 135.5 KiB | 00m00s [ 77/148] efi-srpm-macros-0:6-3.fc42.no 100% | 1.6 MiB/s | 22.5 KiB | 00m00s [ 78/148] file-0:5.46-3.fc42.x86_64 100% | 2.6 MiB/s | 48.6 KiB | 00m00s [ 79/148] filesystem-srpm-macros-0:3.18 100% | 1.6 MiB/s | 26.1 KiB | 00m00s [ 80/148] file-libs-0:5.46-3.fc42.x86_6 100% | 36.1 MiB/s | 849.5 KiB | 00m00s [ 81/148] go-srpm-macros-0:3.8.0-1.fc42 100% | 2.0 MiB/s | 28.3 KiB | 00m00s [ 82/148] python-srpm-macros-0:3.13-5.f 100% | 1.6 MiB/s | 22.5 KiB | 00m00s [ 83/148] qt5-srpm-macros-0:5.15.17-1.f 100% | 622.5 KiB/s | 8.7 KiB | 00m00s [ 84/148] pyproject-srpm-macros-0:1.18. 100% | 252.1 KiB/s | 13.4 KiB | 00m00s [ 85/148] fonts-srpm-macros-1:2.0.5-22. 100% | 425.2 KiB/s | 27.2 KiB | 00m00s [ 86/148] qt6-srpm-macros-0:6.9.1-1.fc4 100% | 469.1 KiB/s | 9.4 KiB | 00m00s [ 87/148] rust-srpm-macros-0:26.4-1.fc4 100% | 699.5 KiB/s | 11.2 KiB | 00m00s [ 88/148] libgcc-0:15.2.1-1.fc42.x86_64 100% | 8.6 MiB/s | 131.6 KiB | 00m00s [ 89/148] zlib-ng-compat-0:2.2.5-2.fc42 100% | 5.2 MiB/s | 79.2 KiB | 00m00s [ 90/148] elfutils-libelf-0:0.193-2.fc4 100% | 11.9 MiB/s | 207.8 KiB | 00m00s [ 91/148] elfutils-libs-0:0.193-2.fc42. 100% | 16.5 MiB/s | 270.2 KiB | 00m00s [ 92/148] elfutils-0:0.193-2.fc42.x86_6 100% | 27.9 MiB/s | 571.4 KiB | 00m00s [ 93/148] elfutils-debuginfod-client-0: 100% | 3.3 MiB/s | 46.9 KiB | 00m00s [ 94/148] filesystem-0:3.18-47.fc42.x86 100% | 18.5 MiB/s | 1.3 MiB | 00m00s [ 95/148] libselinux-0:3.8-2.fc42.x86_6 100% | 6.3 MiB/s | 96.6 KiB | 00m00s [ 96/148] json-c-0:0.18-2.fc42.x86_64 100% | 1.5 MiB/s | 44.9 KiB | 00m00s [ 97/148] libsepol-0:3.8-1.fc42.x86_64 100% | 8.3 MiB/s | 348.9 KiB | 00m00s [ 98/148] openssl-libs-1:3.2.4-4.fc42.x 100% | 36.4 MiB/s | 2.3 MiB | 00m00s [ 99/148] libxcrypt-0:4.4.38-7.fc42.x86 100% | 8.3 MiB/s | 127.2 KiB | 00m00s [100/148] audit-libs-0:4.1.1-1.fc42.x86 100% | 9.0 MiB/s | 138.5 KiB | 00m00s [101/148] pam-libs-0:1.7.0-6.fc42.x86_6 100% | 4.0 MiB/s | 57.5 KiB | 00m00s [102/148] libeconf-0:0.7.6-2.fc42.x86_6 100% | 2.5 MiB/s | 35.2 KiB | 00m00s [103/148] libsemanage-0:3.8.1-2.fc42.x8 100% | 8.0 MiB/s | 123.2 KiB | 00m00s [104/148] lua-libs-0:5.4.8-1.fc42.x86_6 100% | 8.6 MiB/s | 131.9 KiB | 00m00s [105/148] libgomp-0:15.2.1-1.fc42.x86_6 100% | 21.3 MiB/s | 371.6 KiB | 00m00s [106/148] binutils-0:2.44-6.fc42.x86_64 100% | 74.0 MiB/s | 5.8 MiB | 00m00s [107/148] jansson-0:2.14-2.fc42.x86_64 100% | 1.5 MiB/s | 45.7 KiB | 00m00s [108/148] debugedit-0:5.1-7.fc42.x86_64 100% | 5.1 MiB/s | 78.8 KiB | 00m00s [109/148] libarchive-0:3.8.1-1.fc42.x86 100% | 22.9 MiB/s | 421.6 KiB | 00m00s [110/148] systemd-libs-0:257.9-2.fc42.x 100% | 2.5 MiB/s | 810.3 KiB | 00m00s [111/148] libstdc++-0:15.2.1-1.fc42.x86 100% | 3.0 MiB/s | 917.8 KiB | 00m00s [112/148] libxml2-0:2.12.10-1.fc42.x86_ 100% | 17.1 MiB/s | 683.7 KiB | 00m00s [113/148] pkgconf-pkg-config-0:2.3.0-2. 100% | 330.8 KiB/s | 9.9 KiB | 00m00s [114/148] pkgconf-0:2.3.0-2.fc42.x86_64 100% | 1.5 MiB/s | 44.9 KiB | 00m00s [115/148] curl-0:8.11.1-5.fc42.x86_64 100% | 13.4 MiB/s | 220.3 KiB | 00m00s [116/148] pkgconf-m4-0:2.3.0-2.fc42.noa 100% | 474.5 KiB/s | 14.2 KiB | 00m00s [117/148] libpkgconf-0:2.3.0-2.fc42.x86 100% | 1.2 MiB/s | 38.4 KiB | 00m00s [118/148] ca-certificates-0:2025.2.80_v 100% | 39.6 MiB/s | 973.5 KiB | 00m00s [119/148] libffi-0:3.4.6-5.fc42.x86_64 100% | 1.3 MiB/s | 39.9 KiB | 00m00s [120/148] p11-kit-0:0.25.5-6.fc42.x86_6 100% | 25.1 MiB/s | 488.1 KiB | 00m00s [121/148] libtasn1-0:4.20.0-1.fc42.x86_ 100% | 2.4 MiB/s | 75.0 KiB | 00m00s [122/148] p11-kit-trust-0:0.25.5-6.fc42 100% | 8.6 MiB/s | 132.1 KiB | 00m00s [123/148] alternatives-0:1.33-1.fc42.x8 100% | 2.8 MiB/s | 40.5 KiB | 00m00s [124/148] fedora-release-0:42-30.noarch 100% | 901.1 KiB/s | 13.5 KiB | 00m00s [125/148] fedora-release-identity-basic 100% | 1.0 MiB/s | 14.3 KiB | 00m00s [126/148] libcurl-0:8.11.1-5.fc42.x86_6 100% | 20.2 MiB/s | 371.7 KiB | 00m00s [127/148] libbrotli-0:1.1.0-6.fc42.x86_ 100% | 9.5 MiB/s | 339.8 KiB | 00m00s [128/148] libidn2-0:2.3.8-1.fc42.x86_64 100% | 5.3 MiB/s | 174.8 KiB | 00m00s [129/148] libnghttp2-0:1.64.0-3.fc42.x8 100% | 2.4 MiB/s | 77.7 KiB | 00m00s [130/148] crypto-policies-0:20250707-1. 100% | 321.0 KiB/s | 96.0 KiB | 00m00s [131/148] elfutils-default-yama-scope-0 100% | 42.4 KiB/s | 12.6 KiB | 00m00s [132/148] libpsl-0:0.21.5-5.fc42.x86_64 100% | 2.0 MiB/s | 64.0 KiB | 00m00s [133/148] libunistring-0:1.1-9.fc42.x86 100% | 9.8 MiB/s | 542.5 KiB | 00m00s [134/148] xxhash-libs-0:0.8.3-2.fc42.x8 100% | 976.7 KiB/s | 39.1 KiB | 00m00s [135/148] gdb-minimal-0:16.3-1.fc42.x86 100% | 67.8 MiB/s | 4.4 MiB | 00m00s [136/148] systemd-standalone-sysusers-0 100% | 9.5 MiB/s | 154.8 KiB | 00m00s [137/148] publicsuffix-list-dafsa-0:202 100% | 3.9 MiB/s | 59.2 KiB | 00m00s [138/148] krb5-libs-0:1.21.3-6.fc42.x86 100% | 33.7 MiB/s | 759.8 KiB | 00m00s [139/148] keyutils-libs-0:1.6.3-5.fc42. 100% | 1.0 MiB/s | 31.5 KiB | 00m00s [140/148] libcom_err-0:1.47.2-3.fc42.x8 100% | 868.6 KiB/s | 26.9 KiB | 00m00s [141/148] libssh-config-0:0.11.2-1.fc42 100% | 632.3 KiB/s | 8.9 KiB | 00m00s [142/148] libverto-0:0.3.2-10.fc42.x86_ 100% | 671.0 KiB/s | 20.8 KiB | 00m00s [143/148] libssh-0:0.11.2-1.fc42.x86_64 100% | 14.2 MiB/s | 232.5 KiB | 00m00s [144/148] openldap-0:2.6.10-1.fc42.x86_ 100% | 15.8 MiB/s | 258.6 KiB | 00m00s [145/148] libevent-0:2.1.12-15.fc42.x86 100% | 6.7 MiB/s | 260.2 KiB | 00m00s [146/148] cyrus-sasl-lib-0:2.1.28-30.fc 100% | 19.4 MiB/s | 793.5 KiB | 00m00s [147/148] libtool-ltdl-0:2.5.4-4.fc42.x 100% | 1.2 MiB/s | 36.2 KiB | 00m00s [148/148] gdbm-libs-1:1.23-9.fc42.x86_6 100% | 1.8 MiB/s | 57.0 KiB | 00m00s -------------------------------------------------------------------------------- [148/148] Total 100% | 22.7 MiB/s | 52.3 MiB | 00m02s Running transaction Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. [ 1/150] Verify package files 100% | 729.0 B/s | 148.0 B | 00m00s [ 2/150] Prepare transaction 100% | 1.8 KiB/s | 148.0 B | 00m00s [ 3/150] Installing libgcc-0:15.2.1-1. 100% | 130.9 MiB/s | 268.2 KiB | 00m00s [ 4/150] Installing libssh-config-0:0. 100% | 796.9 KiB/s | 816.0 B | 00m00s [ 5/150] Installing publicsuffix-list- 100% | 68.2 MiB/s | 69.8 KiB | 00m00s [ 6/150] Installing fedora-release-ide 100% | 882.8 KiB/s | 904.0 B | 00m00s [ 7/150] Installing fedora-gpg-keys-0: 100% | 17.1 MiB/s | 174.8 KiB | 00m00s [ 8/150] Installing fedora-repos-0:42- 100% | 5.6 MiB/s | 5.7 KiB | 00m00s [ 9/150] Installing fedora-release-com 100% | 12.0 MiB/s | 24.5 KiB | 00m00s [ 10/150] Installing fedora-release-0:4 100% | 2.3 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-13.fc42.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-13.fc42.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'bin' with GID 1. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'daemon' with GID 2. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> >>> Running sysusers scriptlet: setup-0:2.15.0-13.fc42.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-13.fc42.noarch >>> Scriptlet output: >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 20. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 11/150] Installing setup-0:2.15.0-13. 100% | 35.5 MiB/s | 726.7 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 12/150] Installing filesystem-0:3.18- 100% | 1.4 MiB/s | 212.8 KiB | 00m00s [ 13/150] Installing basesystem-0:11-22 100% | 0.0 B/s | 124.0 B | 00m00s [ 14/150] Installing pkgconf-m4-0:2.3.0 100% | 14.5 MiB/s | 14.8 KiB | 00m00s [ 15/150] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 16/150] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [ 17/150] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [ 18/150] Installing pcre2-syntax-0:10. 100% | 135.0 MiB/s | 276.4 KiB | 00m00s [ 19/150] Installing ncurses-base-0:6.5 100% | 34.4 MiB/s | 352.2 KiB | 00m00s [ 20/150] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 21/150] Installing ncurses-libs-0:6.5 100% | 132.9 MiB/s | 952.8 KiB | 00m00s [ 22/150] Installing glibc-0:2.41-11.fc 100% | 141.5 MiB/s | 6.7 MiB | 00m00s [ 23/150] Installing bash-0:5.2.37-1.fc 100% | 177.6 MiB/s | 8.2 MiB | 00m00s [ 24/150] Installing glibc-common-0:2.4 100% | 48.6 MiB/s | 1.0 MiB | 00m00s [ 25/150] Installing glibc-gconv-extra- 100% | 137.9 MiB/s | 7.3 MiB | 00m00s [ 26/150] Installing zlib-ng-compat-0:2 100% | 135.2 MiB/s | 138.4 KiB | 00m00s [ 27/150] Installing bzip2-libs-0:1.0.8 100% | 83.7 MiB/s | 85.7 KiB | 00m00s [ 28/150] Installing xz-libs-1:5.8.1-2. 100% | 213.8 MiB/s | 218.9 KiB | 00m00s [ 29/150] Installing libuuid-0:2.40.4-7 100% | 37.5 MiB/s | 38.4 KiB | 00m00s [ 30/150] Installing libblkid-0:2.40.4- 100% | 128.7 MiB/s | 263.5 KiB | 00m00s [ 31/150] Installing popt-0:1.19-8.fc42 100% | 27.2 MiB/s | 139.4 KiB | 00m00s [ 32/150] Installing readline-0:8.2-13. 100% | 158.6 MiB/s | 487.1 KiB | 00m00s [ 33/150] Installing gmp-1:6.3.0-4.fc42 100% | 264.8 MiB/s | 813.5 KiB | 00m00s [ 34/150] Installing libzstd-0:1.5.7-1. 100% | 263.4 MiB/s | 809.1 KiB | 00m00s [ 35/150] Installing elfutils-libelf-0: 100% | 233.3 MiB/s | 1.2 MiB | 00m00s [ 36/150] Installing libstdc++-0:15.2.1 100% | 236.4 MiB/s | 2.8 MiB | 00m00s [ 37/150] Installing libxcrypt-0:4.4.38 100% | 140.2 MiB/s | 287.2 KiB | 00m00s [ 38/150] Installing libattr-0:2.5.2-5. 100% | 27.4 MiB/s | 28.1 KiB | 00m00s [ 39/150] Installing libacl-0:2.3.2-3.f 100% | 38.2 MiB/s | 39.2 KiB | 00m00s [ 40/150] Installing dwz-0:0.16-1.fc42. 100% | 20.1 MiB/s | 288.5 KiB | 00m00s [ 41/150] Installing mpfr-0:4.2.2-1.fc4 100% | 202.7 MiB/s | 830.4 KiB | 00m00s [ 42/150] Installing gawk-0:5.3.1-1.fc4 100% | 77.0 MiB/s | 1.7 MiB | 00m00s [ 43/150] Installing unzip-0:6.0-66.fc4 100% | 27.5 MiB/s | 393.8 KiB | 00m00s [ 44/150] Installing file-libs-0:5.46-3 100% | 494.1 MiB/s | 11.9 MiB | 00m00s [ 45/150] Installing file-0:5.46-3.fc42 100% | 3.2 MiB/s | 101.7 KiB | 00m00s [ 46/150] Installing crypto-policies-0: 100% | 14.9 MiB/s | 167.8 KiB | 00m00s [ 47/150] Installing pcre2-0:10.45-1.fc 100% | 170.7 MiB/s | 699.1 KiB | 00m00s [ 48/150] Installing grep-0:3.11-10.fc4 100% | 45.6 MiB/s | 1.0 MiB | 00m00s [ 49/150] Installing xz-1:5.8.1-2.fc42. 100% | 55.5 MiB/s | 1.3 MiB | 00m00s [ 50/150] Installing libcap-ng-0:0.8.5- 100% | 73.1 MiB/s | 74.8 KiB | 00m00s [ 51/150] Installing audit-libs-0:4.1.1 100% | 124.2 MiB/s | 381.5 KiB | 00m00s [ 52/150] Installing libsmartcols-0:2.4 100% | 88.6 MiB/s | 181.5 KiB | 00m00s [ 53/150] Installing lz4-libs-0:1.10.0- 100% | 77.4 MiB/s | 158.5 KiB | 00m00s [ 54/150] Installing libsepol-0:3.8-1.f 100% | 201.9 MiB/s | 827.0 KiB | 00m00s [ 55/150] Installing libselinux-0:3.8-2 100% | 94.9 MiB/s | 194.3 KiB | 00m00s [ 56/150] Installing findutils-1:4.10.0 100% | 78.1 MiB/s | 1.9 MiB | 00m00s [ 57/150] Installing sed-0:4.9-4.fc42.x 100% | 42.3 MiB/s | 865.5 KiB | 00m00s [ 58/150] Installing libmount-0:2.40.4- 100% | 174.5 MiB/s | 357.3 KiB | 00m00s [ 59/150] Installing libeconf-0:0.7.6-2 100% | 64.7 MiB/s | 66.2 KiB | 00m00s [ 60/150] Installing pam-libs-0:1.7.0-6 100% | 63.0 MiB/s | 129.1 KiB | 00m00s [ 61/150] Installing libcap-0:2.73-2.fc 100% | 13.8 MiB/s | 212.1 KiB | 00m00s [ 62/150] Installing systemd-libs-0:257 100% | 223.2 MiB/s | 2.2 MiB | 00m00s [ 63/150] Installing lua-libs-0:5.4.8-1 100% | 137.7 MiB/s | 282.0 KiB | 00m00s [ 64/150] Installing libffi-0:3.4.6-5.f 100% | 81.7 MiB/s | 83.7 KiB | 00m00s [ 65/150] Installing libtasn1-0:4.20.0- 100% | 87.0 MiB/s | 178.1 KiB | 00m00s [ 66/150] Installing p11-kit-0:0.25.5-6 100% | 80.9 MiB/s | 2.2 MiB | 00m00s [ 67/150] Installing alternatives-0:1.3 100% | 4.8 MiB/s | 63.8 KiB | 00m00s [ 68/150] Installing libunistring-0:1.1 100% | 215.8 MiB/s | 1.7 MiB | 00m00s [ 69/150] Installing libidn2-0:2.3.8-1. 100% | 91.6 MiB/s | 562.7 KiB | 00m00s [ 70/150] Installing libpsl-0:0.21.5-5. 100% | 75.7 MiB/s | 77.5 KiB | 00m00s [ 71/150] Installing p11-kit-trust-0:0. 100% | 11.8 MiB/s | 397.2 KiB | 00m00s [ 72/150] Installing util-linux-core-0: 100% | 57.1 MiB/s | 1.4 MiB | 00m00s [ 73/150] Installing systemd-standalone 100% | 19.4 MiB/s | 277.8 KiB | 00m00s [ 74/150] Installing tar-2:1.35-5.fc42. 100% | 105.8 MiB/s | 3.0 MiB | 00m00s [ 75/150] Installing libsemanage-0:3.8. 100% | 74.7 MiB/s | 306.2 KiB | 00m00s [ 76/150] Installing shadow-utils-2:4.1 100% | 80.9 MiB/s | 4.0 MiB | 00m00s [ 77/150] Installing zstd-0:1.5.7-1.fc4 100% | 85.5 MiB/s | 1.7 MiB | 00m00s [ 78/150] Installing zip-0:3.0-43.fc42. 100% | 40.3 MiB/s | 702.4 KiB | 00m00s [ 79/150] Installing libfdisk-0:2.40.4- 100% | 121.6 MiB/s | 373.4 KiB | 00m00s [ 80/150] Installing libxml2-0:2.12.10- 100% | 84.8 MiB/s | 1.7 MiB | 00m00s [ 81/150] Installing bzip2-0:1.0.8-20.f 100% | 7.2 MiB/s | 103.8 KiB | 00m00s [ 82/150] Installing sqlite-libs-0:3.47 100% | 214.9 MiB/s | 1.5 MiB | 00m00s [ 83/150] Installing add-determinism-0: 100% | 112.1 MiB/s | 2.5 MiB | 00m00s [ 84/150] Installing build-reproducibil 100% | 1.0 MiB/s | 1.0 KiB | 00m00s [ 85/150] Installing ed-0:1.21-2.fc42.x 100% | 9.7 MiB/s | 148.8 KiB | 00m00s [ 86/150] Installing patch-0:2.8-1.fc42 100% | 15.6 MiB/s | 224.3 KiB | 00m00s [ 87/150] Installing filesystem-srpm-ma 100% | 38.0 MiB/s | 38.9 KiB | 00m00s [ 88/150] Installing elfutils-default-y 100% | 120.2 KiB/s | 2.0 KiB | 00m00s [ 89/150] Installing elfutils-libs-0:0. 100% | 133.8 MiB/s | 685.2 KiB | 00m00s [ 90/150] Installing cpio-0:2.15-4.fc42 100% | 50.0 MiB/s | 1.1 MiB | 00m00s [ 91/150] Installing diffutils-0:3.12-1 100% | 67.9 MiB/s | 1.6 MiB | 00m00s [ 92/150] Installing json-c-0:0.18-2.fc 100% | 85.9 MiB/s | 88.0 KiB | 00m00s [ 93/150] Installing libgomp-0:15.2.1-1 100% | 176.6 MiB/s | 542.5 KiB | 00m00s [ 94/150] Installing jansson-0:2.14-2.f 100% | 92.2 MiB/s | 94.4 KiB | 00m00s [ 95/150] Installing libpkgconf-0:2.3.0 100% | 77.4 MiB/s | 79.2 KiB | 00m00s [ 96/150] Installing pkgconf-0:2.3.0-2. 100% | 6.3 MiB/s | 91.0 KiB | 00m00s [ 97/150] Installing pkgconf-pkg-config 100% | 147.8 KiB/s | 1.8 KiB | 00m00s [ 98/150] Installing libbrotli-0:1.1.0- 100% | 164.8 MiB/s | 843.6 KiB | 00m00s [ 99/150] Installing libnghttp2-0:1.64. 100% | 83.7 MiB/s | 171.5 KiB | 00m00s [100/150] Installing xxhash-libs-0:0.8. 100% | 89.4 MiB/s | 91.6 KiB | 00m00s [101/150] Installing keyutils-libs-0:1. 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [102/150] Installing libcom_err-0:1.47. 100% | 66.6 MiB/s | 68.2 KiB | 00m00s [103/150] Installing libverto-0:0.3.2-1 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [104/150] Installing libtool-ltdl-0:2.5 100% | 69.6 MiB/s | 71.2 KiB | 00m00s [105/150] Installing gdbm-libs-1:1.23-9 100% | 64.2 MiB/s | 131.6 KiB | 00m00s [106/150] Installing cyrus-sasl-lib-0:2 100% | 96.0 MiB/s | 2.3 MiB | 00m00s [107/150] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [108/150] Installing package-notes-srpm 100% | 2.0 MiB/s | 2.0 KiB | 00m00s [109/150] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [110/150] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [111/150] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [112/150] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [113/150] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [114/150] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [115/150] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [116/150] Installing coreutils-common-0 100% | 227.6 MiB/s | 11.2 MiB | 00m00s [117/150] Installing openssl-libs-1:3.2 100% | 260.6 MiB/s | 7.8 MiB | 00m00s [118/150] Installing coreutils-0:9.6-5. 100% | 93.9 MiB/s | 5.4 MiB | 00m00s [119/150] Installing ca-certificates-0: 100% | 1.1 MiB/s | 2.5 MiB | 00m02s [120/150] Installing libarchive-0:3.8.1 100% | 186.9 MiB/s | 957.1 KiB | 00m00s [121/150] Installing krb5-libs-0:1.21.3 100% | 176.3 MiB/s | 2.3 MiB | 00m00s [122/150] Installing libssh-0:0.11.2-1. 100% | 138.9 MiB/s | 568.8 KiB | 00m00s [123/150] Installing gzip-0:1.13-3.fc42 100% | 20.5 MiB/s | 398.4 KiB | 00m00s [124/150] Installing rpm-sequoia-0:1.7. 100% | 219.5 MiB/s | 2.4 MiB | 00m00s [125/150] Installing rpm-libs-0:4.20.1- 100% | 176.6 MiB/s | 723.4 KiB | 00m00s [126/150] Installing rpm-build-libs-0:4 100% | 101.3 MiB/s | 207.4 KiB | 00m00s [127/150] Installing libevent-0:2.1.12- 100% | 177.1 MiB/s | 906.9 KiB | 00m00s [128/150] Installing openldap-0:2.6.10- 100% | 128.8 MiB/s | 659.6 KiB | 00m00s [129/150] Installing libcurl-0:8.11.1-5 100% | 203.9 MiB/s | 835.1 KiB | 00m00s [130/150] Installing elfutils-debuginfo 100% | 6.0 MiB/s | 86.2 KiB | 00m00s [131/150] Installing elfutils-0:0.193-2 100% | 121.8 MiB/s | 2.9 MiB | 00m00s [132/150] Installing binutils-0:2.44-6. 100% | 203.5 MiB/s | 25.8 MiB | 00m00s [133/150] Installing gdb-minimal-0:16.3 100% | 213.7 MiB/s | 13.2 MiB | 00m00s [134/150] Installing debugedit-0:5.1-7. 100% | 12.7 MiB/s | 195.4 KiB | 00m00s [135/150] Installing curl-0:8.11.1-5.fc 100% | 11.3 MiB/s | 453.1 KiB | 00m00s [136/150] Installing rpm-0:4.20.1-1.fc4 100% | 56.8 MiB/s | 2.5 MiB | 00m00s [137/150] Installing lua-srpm-macros-0: 100% | 1.9 MiB/s | 1.9 KiB | 00m00s [138/150] Installing tree-sitter-srpm-m 100% | 7.2 MiB/s | 7.4 KiB | 00m00s [139/150] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [140/150] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.1 KiB | 00m00s [141/150] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [142/150] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [143/150] Installing go-srpm-macros-0:3 100% | 61.6 MiB/s | 63.0 KiB | 00m00s [144/150] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [145/150] Installing redhat-rpm-config- 100% | 46.9 MiB/s | 192.2 KiB | 00m00s [146/150] Installing rpm-build-0:4.20.1 100% | 10.2 MiB/s | 177.4 KiB | 00m00s [147/150] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [148/150] Installing util-linux-0:2.40. 100% | 51.7 MiB/s | 3.5 MiB | 00m00s [149/150] Installing which-0:2.23-2.fc4 100% | 6.0 MiB/s | 85.7 KiB | 00m00s [150/150] Installing info-0:7.2-3.fc42. 100% | 128.5 KiB/s | 358.3 KiB | 00m03s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.6.0-1.fc42.x86_64 alternatives-1.33-1.fc42.x86_64 ansible-srpm-macros-1-17.1.fc42.noarch audit-libs-4.1.1-1.fc42.x86_64 basesystem-11-22.fc42.noarch bash-5.2.37-1.fc42.x86_64 binutils-2.44-6.fc42.x86_64 build-reproducibility-srpm-macros-0.6.0-1.fc42.noarch bzip2-1.0.8-20.fc42.x86_64 bzip2-libs-1.0.8-20.fc42.x86_64 ca-certificates-2025.2.80_v9.0.304-1.0.fc42.noarch coreutils-9.6-5.fc42.x86_64 coreutils-common-9.6-5.fc42.x86_64 cpio-2.15-4.fc42.x86_64 crypto-policies-20250707-1.gitad370a8.fc42.noarch curl-8.11.1-5.fc42.x86_64 cyrus-sasl-lib-2.1.28-30.fc42.x86_64 debugedit-5.1-7.fc42.x86_64 diffutils-3.12-1.fc42.x86_64 dwz-0.16-1.fc42.x86_64 ed-1.21-2.fc42.x86_64 efi-srpm-macros-6-3.fc42.noarch elfutils-0.193-2.fc42.x86_64 elfutils-debuginfod-client-0.193-2.fc42.x86_64 elfutils-default-yama-scope-0.193-2.fc42.noarch elfutils-libelf-0.193-2.fc42.x86_64 elfutils-libs-0.193-2.fc42.x86_64 fedora-gpg-keys-42-1.noarch fedora-release-42-30.noarch fedora-release-common-42-30.noarch fedora-release-identity-basic-42-30.noarch fedora-repos-42-1.noarch file-5.46-3.fc42.x86_64 file-libs-5.46-3.fc42.x86_64 filesystem-3.18-47.fc42.x86_64 filesystem-srpm-macros-3.18-47.fc42.noarch findutils-4.10.0-5.fc42.x86_64 fonts-srpm-macros-2.0.5-22.fc42.noarch forge-srpm-macros-0.4.0-2.fc42.noarch fpc-srpm-macros-1.3-14.fc42.noarch gawk-5.3.1-1.fc42.x86_64 gdb-minimal-16.3-1.fc42.x86_64 gdbm-libs-1.23-9.fc42.x86_64 ghc-srpm-macros-1.9.2-2.fc42.noarch glibc-2.41-11.fc42.x86_64 glibc-common-2.41-11.fc42.x86_64 glibc-gconv-extra-2.41-11.fc42.x86_64 glibc-minimal-langpack-2.41-11.fc42.x86_64 gmp-6.3.0-4.fc42.x86_64 gnat-srpm-macros-6-7.fc42.noarch go-srpm-macros-3.8.0-1.fc42.noarch gpg-pubkey-105ef944-65ca83d1 grep-3.11-10.fc42.x86_64 gzip-1.13-3.fc42.x86_64 info-7.2-3.fc42.x86_64 jansson-2.14-2.fc42.x86_64 json-c-0.18-2.fc42.x86_64 kernel-srpm-macros-1.0-25.fc42.noarch keyutils-libs-1.6.3-5.fc42.x86_64 krb5-libs-1.21.3-6.fc42.x86_64 libacl-2.3.2-3.fc42.x86_64 libarchive-3.8.1-1.fc42.x86_64 libattr-2.5.2-5.fc42.x86_64 libblkid-2.40.4-7.fc42.x86_64 libbrotli-1.1.0-6.fc42.x86_64 libcap-2.73-2.fc42.x86_64 libcap-ng-0.8.5-4.fc42.x86_64 libcom_err-1.47.2-3.fc42.x86_64 libcurl-8.11.1-5.fc42.x86_64 libeconf-0.7.6-2.fc42.x86_64 libevent-2.1.12-15.fc42.x86_64 libfdisk-2.40.4-7.fc42.x86_64 libffi-3.4.6-5.fc42.x86_64 libgcc-15.2.1-1.fc42.x86_64 libgomp-15.2.1-1.fc42.x86_64 libidn2-2.3.8-1.fc42.x86_64 libmount-2.40.4-7.fc42.x86_64 libnghttp2-1.64.0-3.fc42.x86_64 libpkgconf-2.3.0-2.fc42.x86_64 libpsl-0.21.5-5.fc42.x86_64 libselinux-3.8-2.fc42.x86_64 libsemanage-3.8.1-2.fc42.x86_64 libsepol-3.8-1.fc42.x86_64 libsmartcols-2.40.4-7.fc42.x86_64 libssh-0.11.2-1.fc42.x86_64 libssh-config-0.11.2-1.fc42.noarch libstdc++-15.2.1-1.fc42.x86_64 libtasn1-4.20.0-1.fc42.x86_64 libtool-ltdl-2.5.4-4.fc42.x86_64 libunistring-1.1-9.fc42.x86_64 libuuid-2.40.4-7.fc42.x86_64 libverto-0.3.2-10.fc42.x86_64 libxcrypt-4.4.38-7.fc42.x86_64 libxml2-2.12.10-1.fc42.x86_64 libzstd-1.5.7-1.fc42.x86_64 lua-libs-5.4.8-1.fc42.x86_64 lua-srpm-macros-1-15.fc42.noarch lz4-libs-1.10.0-2.fc42.x86_64 mpfr-4.2.2-1.fc42.x86_64 ncurses-base-6.5-5.20250125.fc42.noarch ncurses-libs-6.5-5.20250125.fc42.x86_64 ocaml-srpm-macros-10-4.fc42.noarch openblas-srpm-macros-2-19.fc42.noarch openldap-2.6.10-1.fc42.x86_64 openssl-libs-3.2.4-4.fc42.x86_64 p11-kit-0.25.5-6.fc42.x86_64 p11-kit-trust-0.25.5-6.fc42.x86_64 package-notes-srpm-macros-0.5-13.fc42.noarch pam-libs-1.7.0-6.fc42.x86_64 patch-2.8-1.fc42.x86_64 pcre2-10.45-1.fc42.x86_64 pcre2-syntax-10.45-1.fc42.noarch perl-srpm-macros-1-57.fc42.noarch pkgconf-2.3.0-2.fc42.x86_64 pkgconf-m4-2.3.0-2.fc42.noarch pkgconf-pkg-config-2.3.0-2.fc42.x86_64 popt-1.19-8.fc42.x86_64 publicsuffix-list-dafsa-20250616-1.fc42.noarch pyproject-srpm-macros-1.18.3-1.fc42.noarch python-srpm-macros-3.13-5.fc42.noarch qt5-srpm-macros-5.15.17-1.fc42.noarch qt6-srpm-macros-6.9.1-1.fc42.noarch readline-8.2-13.fc42.x86_64 redhat-rpm-config-342-4.fc42.noarch rpm-4.20.1-1.fc42.x86_64 rpm-build-4.20.1-1.fc42.x86_64 rpm-build-libs-4.20.1-1.fc42.x86_64 rpm-libs-4.20.1-1.fc42.x86_64 rpm-sequoia-1.7.0-5.fc42.x86_64 rust-srpm-macros-26.4-1.fc42.noarch sed-4.9-4.fc42.x86_64 setup-2.15.0-13.fc42.noarch shadow-utils-4.17.4-1.fc42.x86_64 sqlite-libs-3.47.2-2.fc42.x86_64 systemd-libs-257.9-2.fc42.x86_64 systemd-standalone-sysusers-257.9-2.fc42.x86_64 tar-1.35-5.fc42.x86_64 tree-sitter-srpm-macros-0.1.0-8.fc42.noarch unzip-6.0-66.fc42.x86_64 util-linux-2.40.4-7.fc42.x86_64 util-linux-core-2.40.4-7.fc42.x86_64 which-2.23-2.fc42.x86_64 xxhash-libs-0.8.3-2.fc42.x86_64 xz-5.8.1-2.fc42.x86_64 xz-libs-5.8.1-2.fc42.x86_64 zig-srpm-macros-1-4.fc42.noarch zip-3.0-43.fc42.x86_64 zlib-ng-compat-2.2.5-2.fc42.x86_64 zstd-1.5.7-1.fc42.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-42-x86_64-1757475103.274347/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-owe0d_hg/R-CRAN-bbknnR/R-CRAN-bbknnR.spec) Config(child) 0 minutes 24 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm) Config(fedora-42-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-42-x86_64-1757475103.274347/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.20.1-1.fc42.x86_64 rpm-sequoia-1.7.0-5.fc42.x86_64 python3-dnf-4.23.0-1.fc42.noarch python3-dnf-plugins-core-4.10.1-1.fc42.noarch dnf5-5.2.16.0-1.fc42.x86_64 dnf5-plugins-5.2.16.0-1.fc42.x86_64 Finish: chroot init Start: build phase for R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm Start: build setup for R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Updating and loading repositories: Copr repository 100% | 30.8 KiB/s | 1.5 KiB | 00m00s fedora 100% | 263.6 KiB/s | 31.4 KiB | 00m00s updates 100% | 98.9 KiB/s | 7.6 KiB | 00m00s Repositories loaded. 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1:21.0.8.0.9-1.fc42 updates 197.8 MiB javapackages-filesystem noarch 6.4.0-5.fc42 fedora 2.0 KiB jbigkit-libs x86_64 2.1-31.fc42 fedora 121.4 KiB kernel-headers x86_64 6.16.2-200.fc42 updates 6.7 MiB less x86_64 679-1.fc42 updates 406.1 KiB libICE x86_64 1.1.2-2.fc42 fedora 198.4 KiB libRmath x86_64 4.5.1-1.fc42 updates 242.7 KiB libRmath-devel x86_64 4.5.1-1.fc42 updates 19.9 KiB libSM x86_64 1.2.5-2.fc42 fedora 105.0 KiB libX11 x86_64 1.8.12-1.fc42 updates 1.3 MiB libX11-common noarch 1.8.12-1.fc42 updates 1.2 MiB libX11-devel x86_64 1.8.12-1.fc42 updates 1.0 MiB libX11-xcb x86_64 1.8.12-1.fc42 updates 10.9 KiB libXau x86_64 1.0.12-2.fc42 fedora 76.9 KiB libXau-devel x86_64 1.0.12-2.fc42 fedora 7.5 KiB libXcomposite x86_64 0.4.6-5.fc42 fedora 44.4 KiB libXext x86_64 1.3.6-3.fc42 fedora 90.0 KiB libXft x86_64 2.3.8-8.fc42 fedora 168.4 KiB libXi x86_64 1.8.2-2.fc42 fedora 84.6 KiB libXmu x86_64 1.2.1-3.fc42 fedora 199.3 KiB libXrender x86_64 0.9.12-2.fc42 fedora 50.0 KiB libXt x86_64 1.3.1-2.fc42 fedora 429.7 KiB libXtst x86_64 1.2.5-2.fc42 fedora 33.5 KiB libdatrie x86_64 0.2.13-11.fc42 fedora 57.8 KiB libdeflate x86_64 1.24-1.fc42 updates 123.0 KiB libdeflate-devel x86_64 1.24-1.fc42 updates 26.0 KiB libfontenc x86_64 1.1.8-3.fc42 fedora 70.9 KiB libgfortran x86_64 15.2.1-1.fc42 updates 3.4 MiB libicu x86_64 76.1-4.fc42 fedora 36.3 MiB libicu-devel x86_64 76.1-4.fc42 fedora 5.0 MiB libjpeg-turbo x86_64 3.1.2-1.fc42 updates 804.9 KiB liblerc x86_64 4.0.0-8.fc42 fedora 636.1 KiB libmpc x86_64 1.3.1-7.fc42 fedora 164.5 KiB libpng x86_64 2:1.6.44-2.fc42 fedora 241.7 KiB libquadmath x86_64 15.2.1-1.fc42 updates 317.9 KiB libquadmath-devel x86_64 15.2.1-1.fc42 updates 22.2 KiB libstdc++-devel x86_64 15.2.1-1.fc42 updates 16.1 MiB libthai x86_64 0.1.29-10.fc42 fedora 783.4 KiB libtiff x86_64 4.7.0-8.fc42 updates 619.1 KiB libtirpc x86_64 1.3.7-0.fc42 updates 198.9 KiB libtirpc-devel x86_64 1.3.7-0.fc42 updates 251.6 KiB libtommath x86_64 1.3.1~rc1-5.fc42 fedora 130.4 KiB libwebp x86_64 1.5.0-2.fc42 fedora 947.6 KiB libxcb x86_64 1.17.0-5.fc42 fedora 1.1 MiB libxcb-devel x86_64 1.17.0-5.fc42 fedora 2.7 MiB libxcrypt-devel x86_64 4.4.38-7.fc42 updates 30.8 KiB libzstd-devel x86_64 1.5.7-1.fc42 fedora 208.0 KiB lksctp-tools x86_64 1.0.21-1.fc42 updates 251.0 KiB make x86_64 1:4.4.1-10.fc42 fedora 1.8 MiB mkfontscale x86_64 1.2.3-2.fc42 fedora 45.0 KiB nettle x86_64 3.10.1-1.fc42 fedora 790.5 KiB nspr x86_64 4.37.0-2.fc42 updates 315.5 KiB nss x86_64 3.115.1-1.fc42 updates 1.9 MiB nss-softokn x86_64 3.115.1-1.fc42 updates 1.9 MiB nss-softokn-freebl x86_64 3.115.1-1.fc42 updates 848.3 KiB nss-sysinit x86_64 3.115.1-1.fc42 updates 18.1 KiB nss-util x86_64 3.115.1-1.fc42 updates 200.8 KiB openblas x86_64 0.3.29-1.fc42 fedora 111.7 KiB openblas-openmp x86_64 0.3.29-1.fc42 fedora 43.7 MiB openblas-openmp64 x86_64 0.3.29-1.fc42 fedora 43.9 MiB pango x86_64 1.56.4-2.fc42 updates 1.0 MiB pcre2-devel x86_64 10.45-1.fc42 fedora 2.1 MiB pcre2-utf16 x86_64 10.45-1.fc42 fedora 626.3 KiB pcre2-utf32 x86_64 10.45-1.fc42 fedora 598.2 KiB pixman x86_64 0.46.2-1.fc42 updates 710.3 KiB suitesparse x86_64 7.11.0-1.fc42 updates 45.4 MiB tcl x86_64 1:9.0.0-7.fc42 fedora 4.3 MiB tk x86_64 1:9.0.0-4.fc42 fedora 3.8 MiB tre x86_64 0.9.0-1.fc42 updates 75.8 KiB tre-common noarch 0.9.0-1.fc42 updates 75.8 KiB tre-devel x86_64 0.9.0-1.fc42 updates 13.2 KiB ttmkfdir x86_64 3.0.9-72.fc42 fedora 118.5 KiB tzdata noarch 2025b-1.fc42 fedora 1.6 MiB tzdata-java noarch 2025b-1.fc42 fedora 100.1 KiB xdg-utils noarch 1.2.1-3.fc42 fedora 346.3 KiB xml-common noarch 0.6.3-66.fc42 fedora 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-40.fc42 fedora 863.3 KiB xorg-x11-proto-devel noarch 2024.1-4.fc42 fedora 1.7 MiB xz-devel x86_64 1:5.8.1-2.fc42 updates 258.8 KiB zlib-ng x86_64 2.2.5-2.fc42 updates 157.0 KiB zlib-ng-compat-devel x86_64 2.2.5-2.fc42 updates 107.0 KiB Transaction Summary: Installing: 270 packages Total size of inbound packages is 408 MiB. Need to download 408 MiB. After this operation, 1 GiB extra will be used (install 1 GiB, remove 0 B). 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Finish: build setup for R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm Start: rpmbuild R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.fiKYyx Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.6PfkVf + umask 022 + cd /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + cd /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + rm -rf bbknnR + /usr/bin/mkdir -p bbknnR + cd bbknnR + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/bbknnR_2.0.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d bbknnR/src ']' + find bbknnR/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d bbknnR/src ']' + find bbknnR/src/Makevars bbknnR/src/Makevars.win -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.wJ6KHo + umask 022 + cd /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bbknnR + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Z8VmoR + umask 022 + cd /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + '[' /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + mkdir /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bbknnR + mkdir -p /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT/usr/local/lib/R/library bbknnR * installing *source* package ‘bbknnR’ ... ** this is package ‘bbknnR’ version ‘2.0.2’ file ‘R/data.R’ has the wrong MD5 checksum ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 15.2.1 20250808 (Red Hat 15.2.1-1)’ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ RcppExports.cpp:21:64: required from here 21 | rcpp_result_gen = Rcpp::wrap(correct_idx_cpp(nnidx, raw_idx)); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ RcppExports.cpp:21:64: required from here 21 | rcpp_result_gen = Rcpp::wrap(correct_idx_cpp(nnidx, raw_idx)); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ 1505 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]’ 77 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’ 132 | assign_sparse_to_sparse(dst.derived(), src.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’ 713 | *this = other.derived(); | ~~~~~~^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:387:24: required from ‘Eigen::SparseMatrix Rcpp::traits::Exporter >::get() [with T = double]’ 387 | return ans; | ^~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:89:32: required from ‘T Rcpp::internal::as(SEXP, Rcpp::traits::r_type_generic_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ 89 | return exporter.get(); | ~~~~~~~~~~~~^~ /usr/local/lib/R/library/Rcpp/include/Rcpp/as.h:152:31: required from ‘T Rcpp::as(SEXP) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ 152 | return internal::as(x, typename traits::r_type_traits::r_category()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:34:43: required from ‘Rcpp::InputParameter::operator T() [with T = Eigen::SparseMatrix]’ 34 | inline operator T() { return as(x) ; } | ~~~~~^~~ RcppExports.cpp:32:45: required from here 32 | rcpp_result_gen = Rcpp::wrap(trim_graph(cnt, trim)); | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c data_manipulation.cpp -o data_manipulation.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:5: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ data_manipulation.cpp:14:1: required from here 14 | ) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ data_manipulation.cpp:14:1: required from here 14 | ) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ data_manipulation.cpp: In function ‘Eigen::SparseMatrix trim_graph(Eigen::SparseMatrix, int)’: data_manipulation.cpp:30:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare] 30 | for (size_t col = 0; col < cnt.outerSize(); ++col) { | ~~~~^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase, -1, 1, true> >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:96:7: required from ‘class Eigen::internal::sparse_matrix_block_impl, -1, 1>’ 96 | class sparse_matrix_block_impl | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:287:7: required from ‘class Eigen::BlockImpl, -1, 1, true, Eigen::Sparse>’ 287 | class BlockImpl,BlockRows,BlockCols,true,Sparse> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, true>’ 103 | template class Block | ^~~~~ data_manipulation.cpp:31:16: required from here 31 | if (cnt.col(col).nonZeros() <= trim) { | ~~~~~~~^~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ data_manipulation.cpp:37:20: warning: comparison of integer expressions of different signedness: ‘std::priority_queue, std::greater >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 37 | if (q.size() < trim) { | ~~~~~~~~~^~~~~~ data_manipulation.cpp:50:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare] 50 | for (size_t col = 0; col < cnt.outerSize(); ++col) { | ~~~~^~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ 1505 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]’ 77 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’ 132 | assign_sparse_to_sparse(dst.derived(), src.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:917:27: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix]’ 917 | call_assignment_no_alias(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:45:37: required from ‘Derived& Eigen::SparseMatrixBase::operator=(const Derived&) [with Derived = Eigen::SparseMatrix]’ 45 | internal::call_assignment_no_alias(derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:778:26: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’ 778 | Base::operator=(other); | ~~~~~~~~~~~~~~~^~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:713:13: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’ 713 | *this = other.derived(); | ~~~~~~^~~~~~~~~~~~~~~~~ data_manipulation.cpp:58:10: required from here 58 | return cnt; | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o bbknnR.so RcppExports.o data_manipulation.o -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT/usr/local/lib/R/library/00LOCK-bbknnR/00new/bbknnR/libs ** R ** data *** moving datasets to lazyload DB Warning: namespace ‘colorspace’ is not available and has been replaced by .GlobalEnv when processing object ‘panc8_small’ Warning: namespace ‘colorspace’ is not available and has been replaced by .GlobalEnv when processing object ‘panc8_small’ Warning: namespace ‘colorspace’ is not available and has been replaced by .GlobalEnv when processing object ‘panc8_small’ Warning: namespace ‘colorspace’ is not available and has been replaced by .GlobalEnv when processing object ‘panc8_small’ ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘bbknnR’ finding HTML links ... done RidgeRegression html RunBBKNN html bbknnR-package html panc8_small html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bbknnR) + test -d bbknnR/src + cd bbknnR/src + rm -f RcppExports.o data_manipulation.o bbknnR.so + rm -f /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT/usr/local/lib/R/library/R.css + find /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.0.2-1.fc42.copr9541842 --unique-debug-suffix -2.0.2-1.fc42.copr9541842.x86_64 --unique-debug-src-base R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/bbknnR find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.x86_64/bbknnR/src/data_manipulation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/bbknnR/doc/bbknnR-tutorial.Rmd is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT Handler jar skipped: jar handler requires $SOURCE_DATE_EPOCH to be set Handler gzip skipped: gzip handler requires $SOURCE_DATE_EPOCH to be set Handler zip skipped: zip handler requires $SOURCE_DATE_EPOCH to be set Scanned 28 directories and 46 files, processed 16 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/SPECPARTS/rpm-debuginfo.specpart Processing files: R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.x86_64 Provides: R-CRAN-bbknnR = 2.0.2-1.fc42.copr9541842 R-CRAN-bbknnR(x86-64) = 2.0.2-1.fc42.copr9541842 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-bbknnR-debugsource-2.0.2-1.fc42.copr9541842.x86_64 Provides: R-CRAN-bbknnR-debugsource = 2.0.2-1.fc42.copr9541842 R-CRAN-bbknnR-debugsource(x86-64) = 2.0.2-1.fc42.copr9541842 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-bbknnR-debuginfo-2.0.2-1.fc42.copr9541842.x86_64 Provides: R-CRAN-bbknnR-debuginfo = 2.0.2-1.fc42.copr9541842 R-CRAN-bbknnR-debuginfo(x86-64) = 2.0.2-1.fc42.copr9541842 debuginfo(build-id) = 52ed59cb14ae1aff9a6fa8a788f99070e6234de5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-bbknnR-debugsource(x86-64) = 2.0.2-1.fc42.copr9541842 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build/BUILDROOT Wrote: /builddir/build/RPMS/R-CRAN-bbknnR-debuginfo-2.0.2-1.fc42.copr9541842.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-bbknnR-debugsource-2.0.2-1.fc42.copr9541842.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Plvs6Z + umask 022 + cd /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + test -d /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + rm -rf /builddir/build/BUILD/R-CRAN-bbknnR-2.0.2-build + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm Finish: build phase for R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-42-x86_64-1757475103.274347/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-bbknnR-2.0.2-1.fc42.copr9541842.src.rpm) Config(child) 1 minutes 6 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-bbknnR-debugsource", "epoch": null, "version": "2.0.2", "release": "1.fc42.copr9541842", "arch": "x86_64" }, { "name": "R-CRAN-bbknnR-debuginfo", "epoch": null, "version": "2.0.2", "release": "1.fc42.copr9541842", "arch": "x86_64" }, { "name": "R-CRAN-bbknnR", "epoch": null, "version": "2.0.2", "release": "1.fc42.copr9541842", "arch": "x86_64" }, { "name": "R-CRAN-bbknnR", "epoch": null, "version": "2.0.2", "release": "1.fc42.copr9541842", "arch": "src" } ] } RPMResults finished