%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  Sobol4R
%global packver   0.4.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.4.0
Release:          1%{?dist}%{?buildtag}
Summary:          Sobol Indices for Models with Fixed and Stochastic Parameters

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildRequires:    R-CRAN-Rcpp >= 1.0.0
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-CRAN-sensitivity 
BuildRequires:    R-stats 
Requires:         R-CRAN-Rcpp >= 1.0.0
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-rlang 
Requires:         R-CRAN-sensitivity 
Requires:         R-stats 

%description
Tools to design experiments, compute Sobol sensitivity indices, and
summarise stochastic responses inspired by the strategy described by Zhu
and Sudret (2021) <doi:10.1016/j.ress.2021.107815>. Includes helpers to
optimise toy models implemented in C++, visualise indices with uncertainty
quantification, and derive reliability-oriented sensitivity measures based
on failure probabilities. It is further detailed in Logosha, Maumy and
Bertrand (2022) <doi:10.1063/5.0246026> and (2023) <doi:10.1063/5.0246024>
or in Bertrand, Logosha and Maumy (2024)
<https://hal.science/hal-05371803>, <https://hal.science/hal-05371795> and
<https://hal.science/hal-05371798>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}