%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  FIND
%global packver   0.1.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.1
Release:          1%{?dist}%{?buildtag}
Summary:          Objective Comparison of Phase I Dose-Finding Designs

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-grid 
BuildRequires:    R-CRAN-gridExtra 
BuildRequires:    R-CRAN-gtable 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-stats 
Requires:         R-CRAN-ggplot2 
Requires:         R-grid 
Requires:         R-CRAN-gridExtra 
Requires:         R-CRAN-gtable 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-rlang 
Requires:         R-stats 

%description
Generate decision tables and simulate operating characteristics for phase
I dose-finding designs to enable objective comparison across methods.
Supported designs include the traditional 3+3, Bayesian Optimal Interval
(BOIN) (Liu and Yuan (2015) <doi:10.1158/1078-0432.CCR-14-1526>), modified
Toxicity Probability Interval-2 (mTPI-2) (Guo et al. (2017)
<doi:10.1002/sim.7185>), interval 3+3 (i3+3) (Liu et al. (2020)
<doi:10.1177/0962280220939123>), and Generalized 3+3 (G3). Provides
visualization tools for comparing decision rules and operating
characteristics across multiple designs simultaneously.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}