%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  sitrep
%global packver   0.2.3
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.2.3
Release:          1%{?dist}%{?buildtag}
Summary:          Report Templates and Helper Functions for Applied Epidemiology

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.2
Requires:         R-core >= 3.2
BuildArch:        noarch
BuildRequires:    R-CRAN-apyramid >= 0.1.0
BuildRequires:    R-CRAN-epidict >= 0.1.0
BuildRequires:    R-CRAN-epitabulate >= 0.1.0
BuildRequires:    R-CRAN-epikit 
BuildRequires:    R-utils 
Requires:         R-CRAN-apyramid >= 0.1.0
Requires:         R-CRAN-epidict >= 0.1.0
Requires:         R-CRAN-epitabulate >= 0.1.0
Requires:         R-CRAN-epikit 
Requires:         R-utils 

%description
A meta-package that loads the complete sitrep ecosystem for applied
epidemiology analysis. This package provides report templates and
automatically loads companion packages, including 'epitabulate' (for
epidemiological tables), 'epidict' (for data dictionaries), 'epikit' (for
epidemiological utilities), and 'apyramid' (for age-sex pyramids). Simply
load 'sitrep' to access all functions from the ecosystem.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}