%global __brp_check_rpaths %{nil} %global __requires_exclude ^libmpi %global packname JMbayes %global packver 0.9-0 %global rlibdir /usr/local/lib/R/library Name: R-CRAN-%{packname} Version: 0.9.0 Release: 1%{?dist}%{?buildtag} Summary: Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach License: GPL (>= 2) URL: https://cran.r-project.org/package=%{packname} Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz BuildRequires: R-devel Requires: R-core BuildRequires: R-CRAN-nlme BuildRequires: R-CRAN-survival BuildRequires: R-CRAN-doParallel BuildRequires: R-CRAN-rstan BuildRequires: R-CRAN-MASS BuildRequires: R-CRAN-foreach BuildRequires: R-CRAN-Rcpp BuildRequires: R-CRAN-jagsUI BuildRequires: R-CRAN-xtable BuildRequires: R-CRAN-shiny BuildRequires: R-splines BuildRequires: R-CRAN-Hmisc BuildRequires: R-CRAN-RcppArmadillo BuildRequires: R-CRAN-rstantools Requires: R-CRAN-nlme Requires: R-CRAN-survival Requires: R-CRAN-doParallel Requires: R-CRAN-rstan Requires: R-CRAN-MASS Requires: R-CRAN-foreach Requires: R-CRAN-Rcpp Requires: R-CRAN-jagsUI Requires: R-CRAN-xtable Requires: R-CRAN-shiny Requires: R-splines Requires: R-CRAN-Hmisc Requires: R-CRAN-rstantools %description Shared parameter models for the joint modeling of longitudinal and time-to-event data using MCMC; Dimitris Rizopoulos (2016) . %prep %setup -q -c -n %{packname} # fix end of executable files find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \; # prevent binary stripping [ -d %{packname}/src ] && find %{packname}/src -type f -exec \ sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true [ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \ sed -i 's@-g0@@g' {} \; || true # don't allow local prefix in executable scripts find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \; %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css # remove buildroot from installed files find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \; %files %{rlibdir}/%{packname}