%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  avstrat
%global packver   0.1.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.1
Release:          1%{?dist}%{?buildtag}
Summary:          Stratigraphic Data Processing and Section Plots

License:          CC0
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1.0
Requires:         R-core >= 4.1.0
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 >= 4.0
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-tidyr 
BuildRequires:    R-grid 
BuildRequires:    R-CRAN-patchwork 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-CRAN-shiny 
BuildRequires:    R-CRAN-leaflet 
Requires:         R-CRAN-ggplot2 >= 4.0
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-tidyr 
Requires:         R-grid 
Requires:         R-CRAN-patchwork 
Requires:         R-CRAN-rlang 
Requires:         R-CRAN-shiny 
Requires:         R-CRAN-leaflet 

%description
Data processing and generating stratigraphic sections for volcanic
deposits and tephrastratigraphy. Package was developed for studies on
Alaska volcanoes ("av") where stratigraphic ("strat") figures are needed
for interpreting eruptive histories, but the methods are applicable to any
sediment stratigraphy project. Plotting styles inspired by "SedLog"
(Zervas et al. 2009) <doi:10.1016/j.cageo.2009.02.009> but with more
customizable outputs and flexible data input based on best practice
recommendations for the tephra community (Wallace et al. 2022)
<doi:10.1038/s41597-022-01515-y>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}