%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  StatsTFLValR
%global packver   1.0.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.0
Release:          1%{?dist}%{?buildtag}
Summary:          Utilities for Validation of Clinical Trial 'SDTM', 'ADaM' and 'TFL' Outputs

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.2.0
Requires:         R-core >= 4.2.0
BuildArch:        noarch
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-tidyr 
BuildRequires:    R-CRAN-tibble 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-CRAN-haven 
BuildRequires:    R-CRAN-readxl 
BuildRequires:    R-CRAN-tidyselect 
BuildRequires:    R-CRAN-purrr 
BuildRequires:    R-CRAN-arsenal 
BuildRequires:    R-CRAN-data.table 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-tidyr 
Requires:         R-CRAN-tibble 
Requires:         R-CRAN-rlang 
Requires:         R-CRAN-haven 
Requires:         R-CRAN-readxl 
Requires:         R-CRAN-tidyselect 
Requires:         R-CRAN-purrr 
Requires:         R-CRAN-arsenal 
Requires:         R-CRAN-data.table 

%description
Provides utility functions for validation and quality control of clinical
trial datasets and outputs across 'SDTM', 'ADaM' and 'TFL' workflows. The
package supports dataset loading, metadata inspection, frequency and
summary calculations, table-ready aggregations, and compare-style dataset
review similar to 'SAS' 'PROC COMPARE'. Functions are designed to support
reproducible execution, transparent review, and independent verification
of statistical programming results. Dataset comparisons may leverage
'arsenal' <https://cran.r-project.org/package=arsenal>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}