poolfstat-package | PoolFstat |
computeFST | Compute FST from Pool-Seq data |
computePairwiseFSTmatrix | Compute pairwise population population FST matrix (and possibly all pairwise SNP-specific FST) |
genobaypass2pooldata | Convert BayPass read count and haploid pool size input files into a pooldata object |
genoselestim2pooldata | Convert SelEstim read count input files into a pooldata object |
is.pooldata | Check pooldata objects |
make.example.files | Create example files |
pooldata | An S4 class to represent a Pool-Seq data set. |
pooldata-class | An S4 class to represent a Pool-Seq data set. |
pooldata.subset | Create a subset of the pooldata object that contains Pool-Seq data |
pooldata2genobaypass | Convert a pooldata object into BayPass input files. |
pooldata2genoselestim | Convert a pooldata object into SelEstim input files. |
poolfstat | PoolFstat |
popsync2pooldata | Convert Popoolation Sync files into a pooldata object |
vcf2pooldata | Convert a VCF file into a pooldata object. |