Mock Version: 2.4 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-EFAutilities.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1599527049.098502/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6j1y56w3:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6j1y56w3:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '73837559cdf3495d8e97175014b677cf', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1599527049.098502/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6j1y56w3:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-EFAutilities.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-EFAutilities.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1599527049.098502/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6j1y56w3:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6j1y56w3:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '25ac4828e2c645c8a0ae34f57c74a32f', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1599527049.098502/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6j1y56w3:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-EFAutilities.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.sH1pfw + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf EFAutilities + /usr/bin/mkdir -p EFAutilities + cd EFAutilities + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/EFAutilities_2.1.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d EFAutilities/src ']' + find EFAutilities/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.wMqUMu + umask 022 + cd /builddir/build/BUILD + cd EFAutilities + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.6Y1Tyv + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 + cd EFAutilities + mkdir -p /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/usr/local/lib/R/library EFAutilities * installing *source* package 'EFAutilities' ... files 'R/Alignment20180503_c.R', 'R/CorrelationDerivatives20161028_c.R' have the wrong MD5 checksums ** using staged installation ** libs /usr/share/R/make/shlib.mk:6: warning: overriding recipe for target 'EFAutilities.so' Makevars:11: warning: ignoring old recipe for target 'EFAutilities.so' gcc -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c polyACM01c.c -o polyACM01c.o gfortran -m64 -fno-optimize-sibling-calls -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --no-optimize-sibling-calls -c polyACM01f.f95 -o polyACM01f.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran annobin: polyACM01f.f95: Warning: -D_FORTIFY_SOURCE not defined annobin: polyACM01f.f95: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -m64 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o EFAutilities.so polyACM01c.o polyACM01f.o -fopenmp -lflexiblas -lgfortran -lm -lquadmath -fopenmp -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/usr/local/lib/R/library/00LOCK-EFAutilities/00new/EFAutilities/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'EFAutilities' finding HTML links ... done Align.Matrix html BFI228 html CPAI537 html PolychoricRM html efa html efaMR html ssem html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EFAutilities) + test -d EFAutilities/src + cd EFAutilities/src + rm -f polyACM01c.o polyACM01f.o EFAutilities.so + rm -f /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64@@g '{}' ';' + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 2.1.0-1.fc34.copr1651955 --unique-debug-suffix -2.1.0-1.fc34.copr1651955.x86_64 --unique-debug-src-base R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/EFAutilities explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/usr/local/lib/R/library/EFAutilities/libs/EFAutilities.so extracting debug info from /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/usr/local/lib/R/library/EFAutilities/libs/EFAutilities.so original debug info size: 132kB, size after compression: 124kB /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 99 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64/EFAutilities/src/polyACM01c.c is executable but has no shebang, removing executable bit Processing files: R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 Provides: R-CRAN-EFAutilities = 2.1.0-1.fc34.copr1651955 R-CRAN-EFAutilities(x86-64) = 2.1.0-1.fc34.copr1651955 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgfortran.so.5()(64bit) libgfortran.so.5(GFORTRAN_10)(64bit) libgfortran.so.5(GFORTRAN_8)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-EFAutilities-debugsource-2.1.0-1.fc34.copr1651955.x86_64 Provides: R-CRAN-EFAutilities-debugsource = 2.1.0-1.fc34.copr1651955 R-CRAN-EFAutilities-debugsource(x86-64) = 2.1.0-1.fc34.copr1651955 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-EFAutilities-debuginfo-2.1.0-1.fc34.copr1651955.x86_64 Provides: R-CRAN-EFAutilities-debuginfo = 2.1.0-1.fc34.copr1651955 R-CRAN-EFAutilities-debuginfo(x86-64) = 2.1.0-1.fc34.copr1651955 debuginfo(build-id) = d75fc5b58a3c160375e1e2794291563e60fbd7eb Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-EFAutilities-debugsource(x86-64) = 2.1.0-1.fc34.copr1651955 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-EFAutilities-debuginfo-2.1.0-1.fc34.copr1651955.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-EFAutilities-debugsource-2.1.0-1.fc34.copr1651955.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.MmdCBw + umask 022 + cd /builddir/build/BUILD + cd EFAutilities + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-EFAutilities-2.1.0-1.fc34.copr1651955.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0