GUniFrac-package |
Generalized UniFrac distance for comparing microbial communities. |
adonis3 |
Permutational Multivariate Analysis of Variance Using Distance Matrices (Freedman-Lane permutation) |
dmanova |
Distance-based Multivariate Analysis of Variance (Analytical P-value Calculation) |
GUniFrac |
Generalized UniFrac distances for comparing microbial communities. |
PermanovaG |
Permutational multivariate analysis of variance using multiple distance matrices |
PermanovaG2 |
Permutational multivariate analysis of variance using multiple distance (Freedman-Lane permutation) matrices |
Rarefy |
Rarefy the OTU table to an equal sequencing depth |
throat.meta |
Meta data of the throat microbiome samples. |
throat.otu.tab |
OTU count table from 16S sequencing of the throat microbiome samples. |
throat.tree |
UPGMA tree of the OTUs from 16S sequencing of the throat microbiome samples. |