hwep-package |
Hardy-Weinberg Equilibrium in Polyploids |
dgamete |
Gamete dosage probability |
drbounds |
Upper bounds on rates of double reduction |
f1dr |
Estimate Double Reduction in F1 Populations |
freqnext |
Update genotype frequencies after one generation |
gsegmat |
Segregation probabilities of gametes |
gsegmat_symb |
Symbolic representation of the segregation probability matrix |
hweboot |
Bootstrap procedure to test for equilibrium |
hwefit |
Equilibrium and random mating estimation and testing for many loci. |
hwefreq |
Generate HWE genotype frequencies |
hwelike |
Maximum likelihood approach for equilibrium testing and double reduction estimation. |
hwenodr |
Test for HWE in autopolyploids under the assumption of no double reduction |
hwep |
Hardy-Weinberg Equilibrium in Polyploids |
hweustat |
U-process minimizer approach to equilibrium testing and double reduction estimation |
p_from_alpha |
Obtain gamete frequencies at equilibrium given rates of double reduction. |
qqpvalue |
QQ-plot for p-values |
rmlike |
Likelihood inference for random mating |
ts_bands |
Get simultaneous confidence bands for a uniform QQ-plot |
zsegarray |
Zygote segregation distributions. |
zygdist |
Zygote dosage probabilities. |