VulcanoPlot {grandR} | R Documentation |
Plot log2 fold changes against -log10 multiple testing adjusted P values
VulcanoPlot(
data,
analysis = Analyses(data)[1],
p.cutoff = 0.05,
lfc.cutoff = 1,
label.numbers = TRUE,
...
)
data |
the grandR object that contains the data to be plotted |
analysis |
the analysis to plot (default: first analysis) |
p.cutoff |
p-value cutoff (default: 0.05) |
lfc.cutoff |
log fold change cutoff (default: 1) |
label.numbers |
if TRUE, label the number of genes |
... |
further parameters passed to PlotScatter |
a ggplot object