%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  IxPopDyMod
%global packver   0.3.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.3.0
Release:          1%{?dist}%{?buildtag}
Summary:          Framework for Tick Population and Infection Modeling

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.2.4
Requires:         R-core >= 3.2.4
BuildArch:        noarch
BuildRequires:    R-CRAN-magrittr 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-checkmate 
Requires:         R-CRAN-magrittr 
Requires:         R-stats 
Requires:         R-CRAN-checkmate 

%description
Code to specify, run, and then visualize and analyze the results of
Ixodidae (hard-bodied ticks) population and infection dynamics models.
Such models exist in the literature, but the source code to run them is
not always available. 'IxPopDyMod' provides an easy way for these models
to be written and shared.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}