%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  kairos
%global packver   2.1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          2.1.0
Release:          1%{?dist}%{?buildtag}
Summary:          Analysis of Chronological Patterns from Archaeological Count Data

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5
Requires:         R-core >= 3.5
BuildArch:        noarch
BuildRequires:    R-CRAN-arkhe >= 1.6.0
BuildRequires:    R-CRAN-aion >= 1.0.2
BuildRequires:    R-CRAN-dimensio >= 0.6.0
BuildRequires:    R-CRAN-extraDistr 
BuildRequires:    R-grDevices 
BuildRequires:    R-methods 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
Requires:         R-CRAN-arkhe >= 1.6.0
Requires:         R-CRAN-aion >= 1.0.2
Requires:         R-CRAN-dimensio >= 0.6.0
Requires:         R-CRAN-extraDistr 
Requires:         R-grDevices 
Requires:         R-methods 
Requires:         R-stats 
Requires:         R-utils 

%description
A toolkit for absolute and relative dating and analysis of chronological
patterns. This package includes functions for chronological modeling and
dating of archaeological assemblages from count data. It provides methods
for matrix seriation. It also allows to compute time point estimates and
density estimates of the occupation and duration of an archaeological
site.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}