Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1d6' (ED25519) to the list of known hosts. INFO: Calling: curl -H Pragma: -o PQLseq_1.2.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-PQLseq/PQLseq_1.2.1.tar.gz/md5/6244e739f72e7d42895d74de7c35fcb9/PQLseq_1.2.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 114k 100 114k 0 0 1309k 0 --:--:-- --:--:-- --:--:-- 1318k INFO: Reading stdout from command: md5sum PQLseq_1.2.1.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-sr054mlk/R-CRAN-PQLseq/R-CRAN-PQLseq.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-sr054mlk/R-CRAN-PQLseq --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714173051.210143 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-sr054mlk/R-CRAN-PQLseq/R-CRAN-PQLseq.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-sr054mlk/R-CRAN-PQLseq --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714173051.210143 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-sr054mlk/R-CRAN-PQLseq/R-CRAN-PQLseq.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1714173051.210143/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 45.1 KiB/s | 16.6 KiB | 00m00s Copr repository 100% | 10.8 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 20.2 MiB/s | 13.9 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.26-3.fc40 fedora 8.1 MiB bzip2 x86_64 1.0.8-18.fc40 fedora 91.7 KiB coreutils x86_64 9.5-1.fc41 fedora 5.5 MiB cpio x86_64 2.15-1.fc40 fedora 1.1 MiB diffutils x86_64 3.10-5.fc40 fedora 1.6 MiB fedora-release-common noarch 41-0.9 fedora 19.2 KiB findutils x86_64 1:4.9.0-8.fc40 fedora 1.5 MiB gawk x86_64 5.3.0-3.fc40 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.39.9000-16.fc41 fedora 0.0 B grep x86_64 3.11-7.fc40 fedora 1.0 MiB gzip x86_64 1.13-1.fc40 fedora 385.0 KiB info x86_64 7.1-2.fc40 fedora 357.8 KiB patch x86_64 2.7.6-24.fc40 fedora 262.8 KiB redhat-rpm-config noarch 288-1.fc41 fedora 183.3 KiB rpm-build x86_64 4.19.1.1-1.fc40 fedora 173.7 KiB sed x86_64 4.9-1.fc40 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-2.fc41 fedora 4.1 MiB tar x86_64 2:1.35-3.fc40 fedora 2.9 MiB unzip x86_64 6.0-63.fc40 fedora 382.8 KiB util-linux x86_64 2.40-13.fc41 fedora 3.7 MiB which x86_64 2.21-41.fc40 fedora 80.2 KiB xz x86_64 1:5.4.6-3.fc41 fedora 2.0 MiB Installing dependencies: alternatives x86_64 1.26-3.fc40 fedora 62.3 KiB ansible-srpm-macros noarch 1-15.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.1-1.fc41 fedora 327.3 KiB authselect x86_64 1.5.0-5.fc41 fedora 153.6 KiB authselect-libs x86_64 1.5.0-5.fc41 fedora 818.2 KiB basesystem noarch 11-20.fc40 fedora 0.0 B binutils x86_64 2.42.50-6.fc41 fedora 27.2 MiB binutils-gold x86_64 2.42.50-6.fc41 fedora 2.0 MiB bzip2-libs x86_64 1.0.8-18.fc40 fedora 80.7 KiB ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 fedora 2.3 MiB coreutils-common x86_64 9.5-1.fc41 fedora 11.2 MiB cracklib x86_64 2.9.11-5.fc40 fedora 238.9 KiB crypto-policies noarch 20240320-1.git58e3d95.fc41 fedora 119.2 KiB curl x86_64 8.7.1-1.fc41 fedora 758.1 KiB cyrus-sasl-lib x86_64 2.1.28-19.fc40 fedora 2.3 MiB debugedit x86_64 5.0-14.fc40 fedora 199.0 KiB dwz x86_64 0.15-6.fc40 fedora 290.9 KiB ed x86_64 1.20.2-1.fc41 fedora 146.8 KiB efi-srpm-macros noarch 5-11.fc40 fedora 40.1 KiB elfutils x86_64 0.191-7.fc41 fedora 2.5 MiB elfutils-debuginfod-client x86_64 0.191-7.fc41 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.191-7.fc41 fedora 1.8 KiB elfutils-libelf x86_64 0.191-7.fc41 fedora 1.2 MiB elfutils-libs x86_64 0.191-7.fc41 fedora 646.1 KiB fedora-gpg-keys noarch 41-0.1 fedora 125.0 KiB fedora-release noarch 41-0.9 fedora 0.0 B fedora-release-identity-basic noarch 41-0.9 fedora 694.0 B fedora-repos noarch 41-0.1 fedora 4.9 KiB fedora-repos-rawhide noarch 41-0.1 fedora 2.2 KiB file x86_64 5.45-5.fc41 fedora 103.5 KiB file-libs x86_64 5.45-5.fc41 fedora 9.9 MiB filesystem x86_64 3.18-9.fc41 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-14.fc40 fedora 55.3 KiB forge-srpm-macros noarch 0.3.1-1.fc41 fedora 39.0 KiB fpc-srpm-macros noarch 1.3-12.fc40 fedora 144.0 B gdb-minimal x86_64 14.2-5.fc41 fedora 12.7 MiB gdbm x86_64 1:1.23-6.fc40 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-6.fc40 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.1-1.fc41 fedora 747.0 B glibc x86_64 2.39.9000-16.fc41 fedora 6.7 MiB glibc-common x86_64 2.39.9000-16.fc41 fedora 1.0 MiB glibc-gconv-extra x86_64 2.39.9000-16.fc41 fedora 7.8 MiB gmp x86_64 1:6.3.0-1.fc41 fedora 803.4 KiB gnat-srpm-macros noarch 6-5.fc40 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-1.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-9.fc40 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-23.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-3.fc40 fedora 54.4 KiB krb5-libs x86_64 1.21.2-5.fc40 fedora 2.3 MiB libacl x86_64 2.3.2-1.fc40 fedora 40.0 KiB libarchive x86_64 3.7.2-3.fc41 fedora 914.6 KiB libattr x86_64 2.5.2-3.fc40 fedora 28.5 KiB libblkid x86_64 2.40-13.fc41 fedora 262.5 KiB libbrotli x86_64 1.1.0-3.fc40 fedora 829.5 KiB libcap x86_64 2.69-8.fc41 fedora 219.7 KiB libcap-ng x86_64 0.8.5-1.fc41 fedora 69.1 KiB libcom_err x86_64 1.47.0-5.fc40 fedora 67.2 KiB libcurl x86_64 8.7.1-1.fc41 fedora 793.5 KiB libeconf x86_64 0.6.2-1.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-12.fc40 fedora 895.6 KiB libfdisk x86_64 2.40-13.fc41 fedora 362.9 KiB libffi x86_64 3.4.6-1.fc41 fedora 82.4 KiB libgcc x86_64 14.0.1-0.15.fc41 fedora 270.6 KiB libgomp x86_64 14.0.1-0.15.fc41 fedora 519.2 KiB libidn2 x86_64 2.3.7-1.fc40 fedora 329.1 KiB libmount x86_64 2.40-13.fc41 fedora 351.8 KiB libnghttp2 x86_64 1.61.0-1.fc41 fedora 166.1 KiB libnsl2 x86_64 2.0.1-1.fc40 fedora 57.9 KiB libpkgconf x86_64 2.1.0-1.fc40 fedora 74.2 KiB libpsl x86_64 0.21.5-3.fc40 fedora 80.5 KiB libpwquality x86_64 1.4.5-9.fc40 fedora 417.8 KiB libselinux x86_64 3.6-4.fc40 fedora 173.0 KiB libsemanage x86_64 3.6-3.fc40 fedora 293.5 KiB libsepol x86_64 3.6-3.fc40 fedora 802.0 KiB libsmartcols x86_64 2.40-13.fc41 fedora 180.4 KiB libssh x86_64 0.10.6-6.fc41 fedora 513.3 KiB libssh-config noarch 0.10.6-6.fc41 fedora 277.0 B libstdc++ x86_64 14.0.1-0.15.fc41 fedora 2.8 MiB libtasn1 x86_64 4.19.0-6.fc40 fedora 175.7 KiB libtirpc x86_64 1.3.4-1.rc3.fc41 fedora 202.8 KiB libtool-ltdl x86_64 2.4.7-10.fc40 fedora 66.2 KiB libunistring x86_64 1.1-7.fc41 fedora 1.7 MiB libutempter x86_64 1.2.1-13.fc40 fedora 57.7 KiB libuuid x86_64 2.40-13.fc41 fedora 37.4 KiB libverto x86_64 0.3.2-8.fc40 fedora 29.5 KiB libxcrypt x86_64 4.4.36-5.fc40 fedora 262.8 KiB libxml2 x86_64 2.12.6-1.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-1.fc41 fedora 787.9 KiB lua-libs x86_64 5.4.6-5.fc40 fedora 281.1 KiB lua-srpm-macros noarch 1-13.fc40 fedora 1.3 KiB lz4-libs x86_64 1.9.4-6.fc40 fedora 129.4 KiB mpfr x86_64 4.2.1-3.fc40 fedora 832.0 KiB ncurses-base noarch 6.4-12.20240127.fc40 fedora 326.2 KiB ncurses-libs x86_64 6.4-12.20240127.fc40 fedora 963.2 KiB ocaml-srpm-macros noarch 9-3.fc40 fedora 1.9 KiB openblas-srpm-macros noarch 2-17.fc41 fedora 112.0 B openldap x86_64 2.6.7-1.fc40 fedora 635.1 KiB openssl-libs x86_64 1:3.2.1-6.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.3-4.fc40 fedora 2.2 MiB p11-kit-trust x86_64 0.25.3-4.fc40 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-11.fc40 fedora 1.6 KiB pam x86_64 1.6.1-1.fc41 fedora 1.8 MiB pam-libs x86_64 1.6.1-1.fc41 fedora 135.0 KiB pcre2 x86_64 10.43-1.fc41 fedora 653.5 KiB pcre2-syntax noarch 10.43-1.fc41 fedora 249.0 KiB perl-srpm-macros noarch 1-53.fc40 fedora 861.0 B pkgconf x86_64 2.1.0-1.fc40 fedora 82.4 KiB pkgconf-m4 noarch 2.1.0-1.fc40 fedora 13.9 KiB pkgconf-pkg-config x86_64 2.1.0-1.fc40 fedora 989.0 B popt x86_64 1.19-6.fc40 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 fedora 67.5 KiB pyproject-srpm-macros noarch 1.12.0-1.fc40 fedora 1.5 KiB python-srpm-macros noarch 3.12-9.fc41 fedora 50.5 KiB qt5-srpm-macros noarch 5.15.13-1.fc41 fedora 492.0 B qt6-srpm-macros noarch 6.7.0-1.fc41 fedora 456.0 B readline x86_64 8.2-8.fc40 fedora 489.2 KiB rpm x86_64 4.19.1.1-1.fc40 fedora 3.0 MiB rpm-build-libs x86_64 4.19.1.1-1.fc40 fedora 198.4 KiB rpm-libs x86_64 4.19.1.1-1.fc40 fedora 709.9 KiB rpm-sequoia x86_64 1.6.0-2.fc40 fedora 2.2 MiB rust-srpm-macros noarch 26.2-1.fc41 fedora 4.8 KiB setup noarch 2.14.5-2.fc40 fedora 720.4 KiB sqlite-libs x86_64 3.45.2-1.fc41 fedora 1.4 MiB systemd-libs x86_64 255.5-1.fc41 fedora 1.9 MiB util-linux-core x86_64 2.40-13.fc41 fedora 1.5 MiB xxhash-libs x86_64 0.8.2-2.fc40 fedora 88.5 KiB xz-libs x86_64 1:5.4.6-3.fc41 fedora 209.8 KiB zig-srpm-macros noarch 1-2.fc40 fedora 1.1 KiB zip x86_64 3.0-40.fc40 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.6-2.fc40 fedora 134.0 KiB zstd x86_64 1.5.6-1.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation 179 MiB will be used (install 179 MiB, remove 0 B). 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Importing PGP key 0xE99D6AD1: Userid : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0xA15B79CC: Userid : "Fedora (40) " Fingerprint: 115DF9AEF857853EE8445D0A0727707EA15B79CC From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary The key was successfully imported. 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[126/155] Installing gdb-minimal-0:14.2 100% | 204.1 MiB/s | 12.7 MiB | 00m00s [127/155] Installing debugedit-0:5.0-14 100% | 65.7 MiB/s | 201.7 KiB | 00m00s [128/155] Installing rpm-build-libs-0:4 100% | 48.6 MiB/s | 199.2 KiB | 00m00s [129/155] Installing curl-0:8.7.1-1.fc4 100% | 28.6 MiB/s | 760.6 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Stop pre-install scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 [130/155] Installing rpm-0:4.19.1.1-1.f 100% | 61.5 MiB/s | 2.4 MiB | 00m00s [131/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [132/155] Installing lua-srpm-macros-0: 100% | 1.9 MiB/s | 1.9 KiB | 00m00s [133/155] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [134/155] Installing rust-srpm-macros-0 100% | 5.4 MiB/s | 5.6 KiB | 00m00s [135/155] Installing qt6-srpm-macros-0: 100% | 714.8 KiB/s | 732.0 B | 00m00s [136/155] Installing qt5-srpm-macros-0: 100% | 750.0 KiB/s | 768.0 B | 00m00s [137/155] Installing perl-srpm-macros-0 100% | 1.1 MiB/s | 1.1 KiB | 00m00s [138/155] Installing package-notes-srpm 100% | 2.0 MiB/s | 2.0 KiB | 00m00s [139/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [140/155] Installing ocaml-srpm-macros- 100% | 2.1 MiB/s | 2.2 KiB | 00m00s [141/155] Installing kernel-srpm-macros 100% | 2.3 MiB/s | 2.3 KiB | 00m00s [142/155] Installing gnat-srpm-macros-0 100% | 1.2 MiB/s | 1.3 KiB | 00m00s [143/155] Installing ghc-srpm-macros-0: 100% | 1.0 MiB/s | 1.0 KiB | 00m00s [144/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/155] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [146/155] Installing fonts-srpm-macros- 100% | 55.1 MiB/s | 56.5 KiB | 00m00s [147/155] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.3 KiB | 00m00s [148/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [149/155] Installing python-srpm-macros 100% | 50.5 MiB/s | 51.7 KiB | 00m00s [150/155] Installing redhat-rpm-config- 100% | 46.3 MiB/s | 189.7 KiB | 00m00s [151/155] Installing rpm-build-0:4.19.1 100% | 35.5 MiB/s | 182.0 KiB | 00m00s [152/155] Installing pyproject-srpm-mac 100% | 1.0 MiB/s | 2.1 KiB | 00m00s [153/155] Installing util-linux-0:2.40- 100% | 84.9 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40-13.fc41.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40-13.fc41.x86_64 [154/155] Installing which-0:2.21-41.fc 100% | 40.3 MiB/s | 82.4 KiB | 00m00s [155/155] Installing info-0:7.1-2.fc40. 100% | 274.9 KiB/s | 358.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-9.fc41.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-9.fc41.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc40.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-16.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-16.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.x86_64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-6.fc41.x86_64 binutils-gold-2.42.50-6.fc41.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.x86_64 coreutils-common-9.5-1.fc41.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-4.9.0-8.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-5.fc41.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-16.fc41.x86_64 glibc-common-2.39.9000-16.fc41.x86_64 glibc-gconv-extra-2.39.9000-16.fc41.x86_64 glibc-minimal-langpack-2.39.9000-16.fc41.x86_64 gmp-6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch gpg-pubkey-a15b79cc-63d04c2c gpg-pubkey-e99d6ad1-64d2612c grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-13.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.69-8.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.7.1-1.fc41.x86_64 libeconf-0.6.2-1.fc41.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40-13.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.0.1-0.15.fc41.x86_64 libgomp-14.0.1-0.15.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-13.fc41.x86_64 libnghttp2-1.61.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.0-1.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-13.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.15.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-13.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.6-1.fc41.x86_64 libzstd-1.5.6-1.fc41.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-3.2.1-6.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.x86_64 pam-libs-1.6.1-1.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.43-1.fc41.x86_64 pcre2-syntax-10.43-1.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.x86_64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-2.fc41.x86_64 sqlite-libs-3.45.2-1.fc41.x86_64 systemd-libs-255.5-1.fc41.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-13.fc41.x86_64 util-linux-core-2.40-13.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-3.fc41.x86_64 xz-libs-5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.6-1.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-x86_64-1714173051.210143/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1714173051.210143/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-sr054mlk/R-CRAN-PQLseq/R-CRAN-PQLseq.spec) Config(child) 0 minutes 15 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.src.rpm) Config(fedora-rawhide-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1714173051.210143/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Finish: chroot init Start: build phase for R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.src.rpm Start: build setup for R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Updating and loading repositories: fedora 100% | 40.2 KiB/s | 16.6 KiB | 00m00s Copr repository 100% | 25.7 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 22.8 MiB/s | 13.9 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing: R-CRAN-Matrix x86_64 1.6.5-1.fc41.copr7355271 copr_base 7.2 MiB R-CRAN-Rcpp x86_64 1.0.12-1.fc41.copr7349917 copr_base 8.3 MiB R-CRAN-RcppArmadillo x86_64 0.12.8.2.1-1.fc41.copr7353598 copr_base 6.0 MiB R-CRAN-doParallel noarch 1.0.17-1.fc41.copr7356118 copr_base 224.6 KiB R-CRAN-foreach noarch 1.5.2-1.fc41.copr7353650 copr_base 378.1 KiB R-core x86_64 4.4.0-1.fc41~bootstrap copr_base 100.5 MiB R-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 0.0 B Installing dependencies: R-CRAN-codetools noarch 0.2.20-1.fc41.copr7352636 copr_base 106.3 KiB R-CRAN-iterators noarch 1.0.14-1.fc41.copr7350017 copr_base 438.6 KiB R-CRAN-lattice x86_64 0.22.6-1.fc41.copr7352639 copr_base 2.0 MiB R-core-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 394.1 KiB R-java x86_64 4.4.0-1.fc41~bootstrap copr_base 0.0 B R-java-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 0.0 B R-littler x86_64 0.3.19-3.fc40 fedora 189.7 KiB R-rpm-macros noarch 1.2.1-9.fc40 fedora 5.6 KiB abattis-cantarell-vf-fonts noarch 0.301-12.fc40 fedora 192.7 KiB alsa-lib x86_64 1.2.11-2.fc40 fedora 1.4 MiB annobin-docs noarch 12.52-1.fc41 fedora 96.2 KiB annobin-plugin-gcc x86_64 12.52-1.fc41 fedora 971.6 KiB avahi-libs x86_64 0.8-26.fc40 fedora 166.3 KiB brotli x86_64 1.1.0-3.fc40 fedora 31.8 KiB brotli-devel x86_64 1.1.0-3.fc40 fedora 65.6 KiB bzip2-devel x86_64 1.0.8-18.fc40 fedora 309.8 KiB cairo x86_64 1.18.0-3.fc40 fedora 1.7 MiB cairo-devel x86_64 1.18.0-3.fc40 fedora 2.3 MiB cmake-filesystem x86_64 3.28.3-4.fc41 fedora 0.0 B copy-jdk-configs noarch 4.1-5.fc40 fedora 20.3 KiB cpp x86_64 14.0.1-0.15.fc41 fedora 34.9 MiB crypto-policies-scripts noarch 20240320-1.git58e3d95.fc41 fedora 323.2 KiB cups-libs x86_64 1:2.4.7-13.fc41 fedora 618.8 KiB dbus-libs x86_64 1:1.14.10-3.fc40 fedora 368.9 KiB default-fonts-core-sans noarch 4.0-13.fc41 fedora 11.9 KiB desktop-file-utils x86_64 0.26-12.fc40 fedora 226.0 KiB emacs-filesystem noarch 1:30.0-2.fc41 fedora 0.0 B expat x86_64 2.6.2-1.fc41 fedora 280.8 KiB flexiblas x86_64 3.4.2-1.fc41 fedora 46.9 KiB flexiblas-devel x86_64 3.4.2-1.fc41 fedora 4.7 MiB flexiblas-netlib x86_64 3.4.2-1.fc41 fedora 10.4 MiB flexiblas-netlib64 x86_64 3.4.2-1.fc41 fedora 10.5 MiB flexiblas-openblas-openmp x86_64 3.4.2-1.fc41 fedora 39.3 KiB flexiblas-openblas-openmp64 x86_64 3.4.2-1.fc41 fedora 39.3 KiB fontconfig x86_64 2.15.0-4.fc40 fedora 767.3 KiB fontconfig-devel x86_64 2.15.0-4.fc40 fedora 117.2 KiB fonts-filesystem noarch 1:2.0.5-14.fc40 fedora 0.0 B freetype x86_64 2.13.2-5.fc40 fedora 842.6 KiB freetype-devel x86_64 2.13.2-5.fc40 fedora 7.8 MiB fribidi x86_64 1.0.13-4.fc40 fedora 365.3 KiB gc x86_64 8.2.2-6.fc40 fedora 258.7 KiB gcc x86_64 14.0.1-0.15.fc41 fedora 103.9 MiB gcc-c++ x86_64 14.0.1-0.15.fc41 fedora 38.1 MiB gcc-gfortran x86_64 14.0.1-0.15.fc41 fedora 37.2 MiB gcc-plugin-annobin x86_64 14.0.1-0.15.fc41 fedora 57.1 KiB gettext x86_64 0.22.5-2.fc41 fedora 5.2 MiB gettext-envsubst x86_64 0.22.5-2.fc41 fedora 74.9 KiB gettext-libs x86_64 0.22.5-2.fc41 fedora 1.7 MiB gettext-runtime x86_64 0.22.5-2.fc41 fedora 481.3 KiB glib2 x86_64 2.80.0-1.fc41 fedora 14.4 MiB glib2-devel x86_64 2.80.0-1.fc41 fedora 15.4 MiB glibc-devel x86_64 2.39.9000-16.fc41 fedora 36.7 KiB glibc-headers-x86 noarch 2.39.9000-16.fc41 fedora 2.2 MiB gnutls x86_64 3.8.5-1.fc41 fedora 3.2 MiB google-noto-fonts-common noarch 20240401-1.fc41 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240401-1.fc41 fedora 1.2 MiB graphite2 x86_64 1.3.14-15.fc40 fedora 192.0 KiB graphite2-devel x86_64 1.3.14-15.fc40 fedora 49.1 KiB guile30 x86_64 3.0.7-12.fc40 fedora 51.5 MiB harfbuzz x86_64 8.4.0-1.fc41 fedora 2.6 MiB harfbuzz-devel x86_64 8.4.0-1.fc41 fedora 5.1 MiB harfbuzz-icu x86_64 8.4.0-1.fc41 fedora 15.5 KiB java-21-openjdk x86_64 1:21.0.2.0.13-3.fc41 fedora 1.1 MiB java-21-openjdk-devel x86_64 1:21.0.2.0.13-3.fc41 fedora 11.2 MiB java-21-openjdk-headless x86_64 1:21.0.2.0.13-3.fc41 fedora 204.9 MiB javapackages-filesystem noarch 6.2.0-9.fc41 fedora 1.9 KiB jbigkit-libs x86_64 2.1-29.fc40 fedora 117.6 KiB kernel-headers x86_64 6.9.0-0.rc5.44.fc41 fedora 6.3 MiB libICE x86_64 1.1.1-3.fc40 fedora 181.2 KiB libRmath x86_64 4.4.0-1.fc41~bootstrap copr_base 242.8 KiB libRmath-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 17.4 KiB libSM x86_64 1.2.4-3.fc40 fedora 97.3 KiB libX11 x86_64 1.8.9-1.fc41 fedora 1.3 MiB libX11-common noarch 1.8.9-1.fc41 fedora 1.1 MiB libX11-devel x86_64 1.8.9-1.fc41 fedora 1.0 MiB libX11-xcb x86_64 1.8.9-1.fc41 fedora 15.0 KiB libXau x86_64 1.0.11-6.fc40 fedora 66.9 KiB libXau-devel x86_64 1.0.11-6.fc40 fedora 6.4 KiB libXcomposite x86_64 0.4.6-3.fc40 fedora 44.5 KiB libXext x86_64 1.3.6-1.fc40 fedora 90.1 KiB libXext-devel x86_64 1.3.6-1.fc40 fedora 98.9 KiB libXft x86_64 2.3.8-6.fc40 fedora 164.5 KiB libXft-devel x86_64 2.3.8-6.fc40 fedora 31.7 KiB libXi x86_64 1.8.1-5.fc40 fedora 80.7 KiB libXmu x86_64 1.2.1-1.fc41 fedora 187.5 KiB libXrender x86_64 0.9.11-6.fc40 fedora 50.1 KiB libXrender-devel x86_64 0.9.11-6.fc40 fedora 50.1 KiB libXt x86_64 1.3.0-3.fc40 fedora 425.9 KiB libXtst x86_64 1.2.4-6.fc40 fedora 33.6 KiB libb2 x86_64 0.98.1-11.fc40 fedora 42.2 KiB libblkid-devel x86_64 2.40-13.fc41 fedora 44.9 KiB libdatrie x86_64 0.2.13-9.fc40 fedora 57.9 KiB libffi-devel x86_64 3.4.6-1.fc41 fedora 33.1 KiB libfontenc x86_64 1.1.8-1.fc41 fedora 67.0 KiB libgfortran x86_64 14.0.1-0.15.fc41 fedora 2.9 MiB libicu x86_64 74.2-1.fc40 fedora 34.9 MiB libicu-devel x86_64 74.2-1.fc40 fedora 5.6 MiB libjpeg-turbo x86_64 3.0.2-2.fc41 fedora 772.9 KiB liblerc x86_64 4.0.0-6.fc40 fedora 603.5 KiB libmount-devel x86_64 2.40-13.fc41 fedora 63.5 KiB libmpc x86_64 1.3.1-5.fc40 fedora 164.7 KiB libpng x86_64 2:1.6.40-3.fc40 fedora 241.8 KiB libpng-devel x86_64 2:1.6.40-3.fc40 fedora 881.5 KiB libquadmath x86_64 14.0.1-0.15.fc41 fedora 325.9 KiB libquadmath-devel x86_64 14.0.1-0.15.fc41 fedora 21.8 KiB libselinux-devel x86_64 3.6-4.fc40 fedora 126.1 KiB libsepol-devel x86_64 3.6-3.fc40 fedora 120.2 KiB libstdc++-devel x86_64 14.0.1-0.15.fc41 fedora 15.4 MiB libtextstyle x86_64 0.22.5-2.fc41 fedora 195.6 KiB libthai x86_64 0.1.29-8.fc40 fedora 783.5 KiB libtiff x86_64 4.6.0-2.fc40 fedora 1.1 MiB libtirpc-devel x86_64 1.3.4-1.rc3.fc41 fedora 251.6 KiB libwebp x86_64 1.4.0-1.fc41 fedora 802.7 KiB libxcb x86_64 1.17.0-1.fc41 fedora 1.1 MiB libxcb-devel x86_64 1.17.0-1.fc41 fedora 2.7 MiB libxcrypt-devel x86_64 4.4.36-5.fc40 fedora 30.3 KiB libxml2-devel x86_64 2.12.6-1.fc41 fedora 3.4 MiB lksctp-tools x86_64 1.0.19-6.fc40 fedora 269.6 KiB lua x86_64 5.4.6-5.fc40 fedora 597.8 KiB lua-posix x86_64 36.2.1-6.fc40 fedora 599.7 KiB make x86_64 1:4.4.1-6.fc40 fedora 1.8 MiB mkfontscale x86_64 1.2.2-6.fc40 fedora 49.2 KiB mpdecimal x86_64 2.5.1-9.fc40 fedora 200.9 KiB nettle x86_64 3.9.1-6.fc40 fedora 790.1 KiB nspr x86_64 4.35.0-22.fc41 fedora 312.7 KiB nss x86_64 3.99.0-1.fc41 fedora 1.9 MiB nss-softokn x86_64 3.99.0-1.fc41 fedora 1.9 MiB nss-softokn-freebl x86_64 3.99.0-1.fc41 fedora 896.6 KiB nss-sysinit x86_64 3.99.0-1.fc41 fedora 18.2 KiB nss-util x86_64 3.99.0-1.fc41 fedora 226.1 KiB openblas x86_64 0.3.26-4.fc40 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-4.fc40 fedora 38.9 MiB openblas-openmp64 x86_64 0.3.26-4.fc40 fedora 39.1 MiB pango x86_64 1.52.2-1.fc41 fedora 995.8 KiB pcre2-devel x86_64 10.43-1.fc41 fedora 2.0 MiB pcre2-utf16 x86_64 10.43-1.fc41 fedora 590.1 KiB pcre2-utf32 x86_64 10.43-1.fc41 fedora 557.9 KiB pixman x86_64 0.43.4-1.fc41 fedora 710.1 KiB pixman-devel x86_64 0.43.4-1.fc41 fedora 49.4 KiB python-pip-wheel noarch 24.0-2.fc41 fedora 1.5 MiB python3 x86_64 3.12.3-2.fc41 fedora 31.5 KiB python3-libs x86_64 3.12.3-2.fc41 fedora 40.9 MiB python3-packaging noarch 24.0-1.fc41 fedora 424.8 KiB sysprof-capture-devel x86_64 46.0-1.fc41 fedora 252.8 KiB tcl x86_64 1:8.6.14-1.fc41 fedora 4.2 MiB tcl-devel x86_64 1:8.6.14-1.fc41 fedora 791.4 KiB tk x86_64 1:8.6.14-1.fc41 fedora 3.6 MiB tk-devel x86_64 1:8.6.14-1.fc41 fedora 985.0 KiB tre x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 75.9 KiB tre-common noarch 0.8.0-43.20140228gitc2f5d13.fc40 fedora 81.0 KiB tre-devel x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 10.7 KiB ttmkfdir x86_64 3.0.9-70.fc40 fedora 122.7 KiB tzdata noarch 2024a-5.fc41 fedora 1.6 MiB tzdata-java noarch 2024a-5.fc41 fedora 101.7 KiB xdg-utils noarch 1.2.1-1.fc41 fedora 346.3 KiB xml-common noarch 0.6.3-63.fc40 fedora 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-38.fc40 fedora 863.3 KiB xorg-x11-proto-devel noarch 2024.1-1.fc41 fedora 1.7 MiB xz-devel x86_64 1:5.4.6-3.fc41 fedora 255.8 KiB zlib-ng-compat-devel x86_64 2.1.6-2.fc40 fedora 103.4 KiB Transaction Summary: Installing: 167 packages Total size of inbound packages is 287 MiB. Need to download 5 MiB. After this operation 940 MiB will be used (install 940 MiB, remove 0 B). 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bzip2-devel-0:1.0. 100% | 303.5 MiB/s | 310.7 KiB | 00m00s [ 22/169] Installing graphite2-0:1.3.14 100% | 94.8 MiB/s | 194.2 KiB | 00m00s [ 23/169] Installing libXau-0:1.0.11-6. 100% | 66.8 MiB/s | 68.4 KiB | 00m00s [ 24/169] Installing libxcb-0:1.17.0-1. 100% | 124.0 MiB/s | 1.1 MiB | 00m00s [ 25/169] Installing libICE-0:1.1.1-3.f 100% | 89.2 MiB/s | 182.6 KiB | 00m00s [ 26/169] Installing pixman-0:0.43.4-1. 100% | 231.5 MiB/s | 711.2 KiB | 00m00s [ 27/169] Installing libRmath-0:4.4.0-1 100% | 237.9 MiB/s | 243.6 KiB | 00m00s [ 28/169] Installing libjpeg-turbo-0:3. 100% | 252.1 MiB/s | 774.6 KiB | 00m00s [ 29/169] Installing libRmath-devel-0:4 100% | 0.0 B/s | 17.7 KiB | 00m00s [ 30/169] Installing pixman-devel-0:0.4 100% | 49.0 MiB/s | 50.2 KiB | 00m00s [ 31/169] Installing libSM-0:1.2.4-3.fc 100% | 96.3 MiB/s | 98.6 KiB | 00m00s [ 32/169] Installing libXau-devel-0:1.0 100% | 1.3 MiB/s | 8.2 KiB | 00m00s [ 33/169] Installing libxcb-devel-0:1.1 100% | 34.9 MiB/s | 3.1 MiB | 00m00s [ 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python3-0:3.12.3-2 100% | 16.2 MiB/s | 33.2 KiB | 00m00s [ 60/169] Installing crypto-policies-sc 100% | 66.0 MiB/s | 338.1 KiB | 00m00s [ 61/169] Installing nss-sysinit-0:3.99 100% | 18.9 MiB/s | 19.3 KiB | 00m00s [ 62/169] Installing nss-0:3.99.0-1.fc4 100% | 94.9 MiB/s | 1.9 MiB | 00m00s >>> Running post-install scriptlet: nss-0:3.99.0-1.fc41.x86_64 >>> Stop post-install scriptlet: nss-0:3.99.0-1.fc41.x86_64 [ 63/169] Installing python3-packaging- 100% | 85.1 MiB/s | 435.6 KiB | 00m00s [ 64/169] Installing cmake-filesystem-0 100% | 1.7 MiB/s | 7.1 KiB | 00m00s [ 65/169] Installing libxml2-devel-0:2. 100% | 201.0 MiB/s | 3.4 MiB | 00m00s [ 66/169] Installing brotli-0:1.1.0-3.f 100% | 31.7 MiB/s | 32.5 KiB | 00m00s [ 67/169] Installing brotli-devel-0:1.1 100% | 22.1 MiB/s | 68.0 KiB | 00m00s [ 68/169] Installing glibc-headers-x86- 100% | 87.8 MiB/s | 2.3 MiB | 00m00s [ 69/169] Installing libxcrypt-devel-0: 100% | 15.9 MiB/s | 32.6 KiB | 00m00s [ 70/169] Installing glibc-devel-0:2.39 100% | 9.9 MiB/s | 40.4 KiB | 00m00s [ 71/169] Installing libstdc++-devel-0: 100% | 215.8 MiB/s | 15.5 MiB | 00m00s [ 72/169] Installing dbus-libs-1:1.14.1 100% | 120.5 MiB/s | 370.1 KiB | 00m00s [ 73/169] Installing avahi-libs-0:0.8-2 100% | 55.0 MiB/s | 168.9 KiB | 00m00s [ 74/169] Installing gettext-envsubst-0 100% | 74.6 MiB/s | 76.3 KiB | 00m00s [ 75/169] Installing gettext-runtime-0: 100% | 59.9 MiB/s | 490.7 KiB | 00m00s [ 76/169] Installing gettext-0:0.22.5-2 100% | 218.1 MiB/s | 5.2 MiB | 00m00s [ 77/169] Installing pcre2-utf32-0:10.4 100% | 272.8 MiB/s | 558.8 KiB | 00m00s [ 78/169] Installing pcre2-utf16-0:10.4 100% | 192.3 MiB/s | 590.9 KiB | 00m00s [ 79/169] Installing pcre2-devel-0:10.4 100% | 153.0 MiB/s | 2.0 MiB | 00m00s [ 80/169] Installing libselinux-devel-0 100% | 15.7 MiB/s | 160.6 KiB | 00m00s [ 81/169] Installing libmount-devel-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [ 82/169] Installing libtirpc-devel-0:1 100% | 51.4 MiB/s | 263.0 KiB | 00m00s [ 83/169] Installing libX11-xcb-0:1.8.9 100% | 15.5 MiB/s | 15.9 KiB | 00m00s [ 84/169] Installing annobin-docs-0:12. 100% | 94.9 MiB/s | 97.2 KiB | 00m00s [ 85/169] Installing libfontenc-0:1.1.8 100% | 66.8 MiB/s | 68.4 KiB | 00m00s [ 86/169] Installing google-noto-fonts- 100% | 17.8 MiB/s | 18.3 KiB | 00m00s [ 87/169] Installing google-noto-sans-v 100% | 208.2 MiB/s | 1.2 MiB | 00m00s [ 88/169] Installing default-fonts-core 100% | 8.9 MiB/s | 18.2 KiB | 00m00s [ 89/169] Installing lua-posix-0:36.2.1 100% | 75.0 MiB/s | 614.7 KiB | 00m00s [ 90/169] Installing copy-jdk-configs-0 100% | 20.5 MiB/s | 21.0 KiB | 00m00s [ 91/169] Installing tzdata-java-0:2024 100% | 99.7 MiB/s | 102.1 KiB | 00m00s [ 92/169] Installing lksctp-tools-0:1.0 100% | 66.9 MiB/s | 274.0 KiB | 00m00s [ 93/169] Installing javapackages-files 100% | 2.6 MiB/s | 5.3 KiB | 00m00s [ 94/169] Installing alsa-lib-0:1.2.11- 100% | 138.7 MiB/s | 1.4 MiB | 00m00s [ 95/169] Installing gc-0:8.2.2-6.fc40. 100% | 51.0 MiB/s | 261.2 KiB | 00m00s [ 96/169] Installing guile30-0:3.0.7-12 100% | 322.4 MiB/s | 51.6 MiB | 00m00s [ 97/169] Installing make-1:4.4.1-6.fc4 100% | 163.7 MiB/s | 1.8 MiB | 00m00s [ 98/169] Installing gcc-0:14.0.1-0.15. 100% | 324.0 MiB/s | 104.0 MiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:288-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:288-1.fc41.noarch [ 99/169] Installing gcc-c++-0:14.0.1-0 100% | 315.0 MiB/s | 38.1 MiB | 00m00s [100/169] Installing libquadmath-devel- 100% | 22.7 MiB/s | 23.2 KiB | 00m00s [101/169] Installing gcc-gfortran-0:14. 100% | 315.2 MiB/s | 37.2 MiB | 00m00s [102/169] Installing emacs-filesystem-1 100% | 531.2 KiB/s | 544.0 B | 00m00s [103/169] Installing libdatrie-0:0.2.13 100% | 57.7 MiB/s | 59.0 KiB | 00m00s [104/169] Installing libthai-0:0.1.29-8 100% | 191.7 MiB/s | 785.3 KiB | 00m00s [105/169] Installing nettle-0:3.9.1-6.f 100% | 154.9 MiB/s | 793.3 KiB | 00m00s [106/169] Installing gnutls-0:3.8.5-1.f 100% | 213.3 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| 60.4 MiB/s | 123.8 KiB | 00m00s [151/169] Installing xorg-x11-fonts-Typ 100% | 15.4 MiB/s | 865.6 KiB | 00m00s >>> Running post-install scriptlet: xorg-x11-fonts-Type1-0:7.5-38.fc40.noarch >>> Stop post-install scriptlet: xorg-x11-fonts-Type1-0:7.5-38.fc40.noarch [152/169] Installing harfbuzz-icu-0:8.4 100% | 8.0 MiB/s | 16.3 KiB | 00m00s [153/169] Installing fontconfig-devel-0 100% | 16.5 MiB/s | 151.9 KiB | 00m00s [154/169] Installing freetype-devel-0:2 100% | 238.1 MiB/s | 7.9 MiB | 00m00s [155/169] Installing cairo-devel-0:1.18 100% | 229.1 MiB/s | 2.3 MiB | 00m00s [156/169] Installing harfbuzz-devel-0:8 100% | 244.8 MiB/s | 5.1 MiB | 00m00s [157/169] Installing libXft-devel-0:2.3 100% | 8.6 MiB/s | 44.3 KiB | 00m00s [158/169] Installing tk-devel-1:8.6.14- 100% | 77.8 MiB/s | 1.0 MiB | 00m00s [159/169] Installing R-core-devel-0:4.4 100% | 97.8 MiB/s | 400.7 KiB | 00m00s [160/169] Installing libXcomposite-0:0. 100% | 45.0 MiB/s | 46.1 KiB | 00m00s [161/169] Installing java-21-openjdk-1: 100% | 58.0 MiB/s | 1.1 MiB | 00m00s >>> Running post-install scriptlet: java-21-openjdk-1:21.0.2.0.13-3.fc41.x86_64 >>> Stop post-install scriptlet: java-21-openjdk-1:21.0.2.0.13-3.fc41.x86_64 [162/169] Installing java-21-openjdk-de 100% | 261.4 MiB/s | 11.2 MiB | 00m00s >>> Running post-install scriptlet: java-21-openjdk-devel-1:21.0.2.0.13-3.fc41.x >>> Stop post-install scriptlet: java-21-openjdk-devel-1:21.0.2.0.13-3.fc41.x86_ [163/169] Installing R-java-devel-0:4.4 100% | 0.0 B/s | 124.0 B | 00m00s [164/169] Installing R-devel-0:4.4.0-1. 100% | 30.3 KiB/s | 124.0 B | 00m00s [165/169] Installing R-CRAN-Matrix-0:1. 100% | 70.9 MiB/s | 7.6 MiB | 00m00s [166/169] Installing R-CRAN-doParallel- 100% | 45.3 MiB/s | 231.9 KiB | 00m00s [167/169] Installing R-CRAN-RcppArmadil 100% | 139.2 MiB/s | 6.1 MiB | 00m00s [168/169] Installing annobin-plugin-gcc 100% | 39.6 MiB/s | 973.0 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:288-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:288-1.fc41.noarch [169/169] Installing gcc-plugin-annobin 100% | 78.5 KiB/s | 58.7 KiB | 00m01s >>> Running trigger-install scriptlet: redhat-rpm-config-0:288-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:288-1.fc41.noarch >>> Running post-transaction scriptlet: crypto-policies-scripts-0:20240320-1.git >>> Stop post-transaction scriptlet: crypto-policies-scripts-0:20240320-1.git58e >>> Running post-transaction scriptlet: nss-0:3.99.0-1.fc41.x86_64 >>> Stop post-transaction scriptlet: nss-0:3.99.0-1.fc41.x86_64 >>> Running post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Stop post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Running post-transaction scriptlet: java-21-openjdk-headless-1:21.0.2.0.13-3 >>> Stop post-transaction scriptlet: java-21-openjdk-headless-1:21.0.2.0.13-3.fc >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-1:21.0.2.0.13-3.fc41.x86 >>> Stop post-transaction scriptlet: java-21-openjdk-1:21.0.2.0.13-3.fc41.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-devel-1:21.0.2.0.13-3.fc >>> Stop post-transaction scriptlet: java-21-openjdk-devel-1:21.0.2.0.13-3.fc41. >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-16.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-16.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.80.0-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.80.0-1.fc41.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.80.0-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.80.0-1.fc41.x86_64 >>> Running trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 Warning: skipped PGP checks for 15 package(s). Finish: build setup for R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.src.rpm Start: rpmbuild R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.PloATL + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf PQLseq + /usr/bin/mkdir -p PQLseq + cd PQLseq + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/PQLseq_1.2.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/PQLseq-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/PQLseq-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d PQLseq/src ']' + find PQLseq/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.sP7lJE + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd PQLseq + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.zCc2eJ + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd PQLseq + mkdir -p /builddir/build/BUILDROOT/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-PQLseq-1.2.1-1.fc41.copr7358838.x86_64/usr/local/lib/R/library PQLseq * installing *source* package ‘PQLseq’ ... ** package ‘PQLseq’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0)’ using C++11 g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c PQLseq.cpp -o PQLseq.o PQLseq.cpp: In function ‘SEXPREC* AI(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: PQLseq.cpp:61:34: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 61 | for(size_t i=1; i<=numK; ++i) { | ~^~~~~~ PQLseq.cpp:109:42: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 109 | for(size_t i=0; i