%global __brp_check_rpaths %{nil}
%global packname  r4ss
%global packver   1.44.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.44.0
Release:          1%{?dist}%{?buildtag}
Summary:          R Code for Stock Synthesis

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-CRAN-coda 
BuildRequires:    R-CRAN-corpcor 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-forcats 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-lifecycle 
BuildRequires:    R-CRAN-stringr 
BuildRequires:    R-CRAN-kableExtra 
Requires:         R-CRAN-coda 
Requires:         R-CRAN-corpcor 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-forcats 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-lifecycle 
Requires:         R-CRAN-stringr 
Requires:         R-CRAN-kableExtra 

%description
A collection of R functions for use with Stock Synthesis, a fisheries
stock assessment modeling platform written in ADMB by Dr. Richard D.
Methot at the NOAA Northwest Fisheries Science Center. The functions
include tools for summarizing and plotting results, manipulating files,
visualizing model parameterizations, and various other common stock
assessment tasks. This version of '{r4ss}' is compatible with Stock
Synthesis versions 3.24 through 3.30 (specifically version 3.30.19.01,
from April 2022).

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}