organizeSCRM {poolABC} | R Documentation |
Organize scrm output
Description
This function is utilized to sort out the scrm output. The order of the populations changes accordingly to the model used (i.e. single or parallel origin). Running this function will re-organize the output produced by scrm, so that the populations are in the same order in both models.
Usage
organizeSCRM(seg_sites, nHap, nPops)
Arguments
seg_sites |
a matrix of segregating sites as produced by scrm. Each column of the matrix is a different site and each row is a different haplotype. |
nHap |
an integer representing the total number of haplotypes simulated. |
nPops |
an integer, representing the total number of populations of the simulated model. |
Value
a matrix of segregating sites, similar to seg_sites
but with the
populations organized so that the order is always the same, regardless of
the model used.
[Package poolABC version 1.0.0 Index]