%global __brp_check_rpaths %{nil}
%global packname  CoDiNA
%global packver   1.1.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.1.2
Release:          1%{?dist}%{?buildtag}
Summary:          Co-Expression Differential Network Analysis

License:          GPL-2
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.1
Requires:         R-core >= 3.1
BuildArch:        noarch
BuildRequires:    R-CRAN-data.table 
BuildRequires:    R-CRAN-igraph 
BuildRequires:    R-CRAN-magrittr 
BuildRequires:    R-CRAN-plyr 
BuildRequires:    R-CRAN-visNetwork 
BuildRequires:    R-CRAN-reshape2 
Requires:         R-CRAN-data.table 
Requires:         R-CRAN-igraph 
Requires:         R-CRAN-magrittr 
Requires:         R-CRAN-plyr 
Requires:         R-CRAN-visNetwork 
Requires:         R-CRAN-reshape2 

%description
Categorize links and nodes from multiple networks in 3 categories: Common
links (alpha) specific links (gamma), and different links (beta). Also
categorizes the links into sub-categories and groups. The package includes
a visualization tool for the networks. More information about the
methodology can be found at: Gysi et. al., 2018 <arXiv:1802.00828>.

%prep
%setup -q -c -n %{packname}

find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}