%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  gluvarpro
%global packver   7.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          7.0
Release:          1%{?dist}%{?buildtag}
Summary:          Glucose Variability Measures from Continuous Glucose Monitoring Data

License:          GPL-2
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-graphics 
BuildRequires:    R-CRAN-gridExtra 
BuildRequires:    R-CRAN-pracma 
BuildRequires:    R-CRAN-scales 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-tidyr 
BuildRequires:    R-CRAN-zoo 
Requires:         R-CRAN-ggplot2 
Requires:         R-graphics 
Requires:         R-CRAN-gridExtra 
Requires:         R-CRAN-pracma 
Requires:         R-CRAN-scales 
Requires:         R-stats 
Requires:         R-CRAN-tidyr 
Requires:         R-CRAN-zoo 

%description
Calculate different glucose variability measures, including average
measures of glycemia, measures of glycemic variability and measures of
glycemic risk, from continuous glucose monitoring data. Boris P.
Kovatchev, Erik Otto, Daniel Cox, Linda Gonder-Frederick, and William
Clarke (2006) <doi:10.2337/dc06-1085>. Jean-Pierre Le Floch, Philippe
Escuyer, Eric Baudin, Dominique Baudon, and Leon Perlemuter (1990)
<doi:10.2337/diacare.13.2.172>. C.M. McDonnell, S.M. Donath, S.I. Vidmar,
G.A. Werther, and F.J. Cameron (2005) <doi:10.1089/dia.2005.7.253>.
Everitt, Brian (1998) <doi:10.1111/j.1751-5823.2011.00149_2.x>. Becker, R.
A., Chambers, J. M. and Wilks, A. R. (1988) <doi:10.2307/2234167>.
Dougherty, R. L., Edelman, A. and Hyman, J. M. (1989)
<doi:10.1090/S0025-5718-1989-0962209-1>. Tukey, J. W. (1977)
<doi:10.1016/0377-2217(86)90209-2>. F. John Service (2013)
<doi:10.2337/db12-1396>. Edmond A. Ryan, Tami Shandro, Kristy Green, Breay
W. Paty, Peter A. Senior, David Bigam, A.M. James Shapiro, and
Marie-Christine Vantyghem (2004) <doi:10.2337/diabetes.53.4.955>. F. John
Service, George D. Molnar, John W. Rosevear, Eugene Ackerman, Leal C.
Gatewood, William F. Taylor (1970) <doi:10.2337/diab.19.9.644>. Sarah E.
Siegelaar, Frits Holleman, Joost B. L. Hoekstra, and J. Hans DeVries
(2010) <doi:10.1210/er.2009-0021>. Gabor Marics, Zsofia Lendvai, Csaba
Lodi, Levente Koncz, David Zakarias, Gyorgy Schuster, Borbala Mikos, Csaba
Hermann, Attila J. Szabo, and Peter Toth-Heyn (2015)
<doi:10.1186/s12938-015-0035-3>. Thomas Danne, Revital Nimri, Tadej
Battelino, Richard M. Bergenstal, Kelly L. Close, J. Hans DeVries,
SatishGarg, Lutz Heinemann, Irl Hirsch, Stephanie A. Amiel, Roy Beck,
Emanuele Bosi, Bruce Buckingham, ClaudioCobelli, Eyal Dassau, Francis J.
Doyle, Simon Heller, Roman Hovorka, Weiping Jia, Tim Jones, Olga
Kordonouri,Boris Kovatchev, Aaron Kowalski, Lori Laffel, David Maahs,
Helen R. Murphy, Kirsten Nørgaard, Christopher G.Parkin, Eric Renard,
Banshi Saboo, Mauro Scharf, William V. Tamborlane, Stuart A. Weinzimer,
and Moshe Phillip.International consensus on use of continuous glucose
monitoring.Diabetes Care, 2017 <doi:10.2337/dc17-1600>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}