checkNameChrDfMarks {idiogramFISH} | R Documentation |
Function to check names of OTUs (species) among data.frames
Description
This function reads two data.frames the one with chromosome sizes, and one df
with data of marks (sites) both have to have the column chrName
and if
several species, OTU
. The functions returns a filtered list with 1.
data.frame of
chrSizes,
2. data.frame of marks, 3. mark names 4. max mark size.
Usage
checkNameChrDfMarks(listChrSize, listOfdfMarks)
Arguments
listChrSize |
list of data.frames, with columns: OTU (optional), chrName, for chr. with cen.: shortArmSize, longArmSize, for holoc.: chrSize |
listOfdfMarks |
list of data.frames of marks (sites): OTU (opt / mandat. if in dfChrSize), chrName markName markSize, for chr. with cen.: chrRegion (p,q) markDistCen, for holoc: markPos |
Value
list
[Package idiogramFISH version 2.0.13 Index]