applyGatingStrategy {IFC} | R Documentation |
Apply Gating Strategy
Description
Applies Gating Strategy to an 'IFC_data' object
Usage
applyGatingStrategy(
obj,
gating,
keep,
display_progress = TRUE,
verbose = FALSE,
...
)
Arguments
obj |
an 'IFC_data' object extracted with features extracted. |
gating |
an 'IFC_gating' object extracted by |
keep |
names of population(s) that should not be overwritten using 'gating'. |
display_progress |
whether to display a progress bar. Default is TRUE. |
verbose |
whether to display information (use for debugging purpose). Default is FALSE. |
... |
other arguments to be passed. |
Details
/!\ Please note that all former gating strategy (i.e. regions, pops, graphs and stats) will be removed from returned object, with the exception of population(s) described in 'keep'.
An error will be thrown if a feature is required to create a population or a graph but can't be found in 'obj'.
When tagged population(s) is(are) imported, objects from this(these) population(s) outside 'obj' will be discarded.
If this results in NULL, then all objects will be tagged.
Value
A named list of class 'IFC_data' with new regions, pops and graphs