%global __brp_check_rpaths %{nil}
%global packname  icertool
%global packver   0.0.3
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.0.3
Release:          1%{?dist}%{?buildtag}
Summary:          Calculate and Plot ICER

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-shiny 
BuildRequires:    R-CRAN-shinythemes 
BuildRequires:    R-CRAN-purrr 
BuildRequires:    R-CRAN-DT 
BuildRequires:    R-CRAN-tidyverse 
BuildRequires:    R-CRAN-readxl 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-ggrepel 
BuildRequires:    R-CRAN-digest 
BuildRequires:    R-CRAN-shinyhelper 
Requires:         R-CRAN-shiny 
Requires:         R-CRAN-shinythemes 
Requires:         R-CRAN-purrr 
Requires:         R-CRAN-DT 
Requires:         R-CRAN-tidyverse 
Requires:         R-CRAN-readxl 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-ggrepel 
Requires:         R-CRAN-digest 
Requires:         R-CRAN-shinyhelper 

%description
The app will calculate the ICER (incremental cost-effectiveness ratio)
Rawlins (2012) <doi:10.1016/B978-0-7020-4084-9.00044-6> from the mean
costs and quality-adjusted life years (QALY) Torrance and Feeny (2009)
<doi:10.1017/S0266462300008461> for a set of treatment options, and draw
the efficiency frontier in the costs-effectiveness plane. The app
automatically identifies and excludes dominated and extended-dominated
options from the ICER calculation.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}