%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  BFpack
%global packver   1.2.3
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.2.3
Release:          1%{?dist}%{?buildtag}
Summary:          Flexible Bayes Factor Testing of Scientific Expectations

License:          GPL (>= 3)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.0.0
Requires:         R-core >= 3.0.0
BuildRequires:    R-CRAN-bain 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-MASS 
BuildRequires:    R-CRAN-mvtnorm 
BuildRequires:    R-CRAN-pracma 
BuildRequires:    R-CRAN-lme4 
BuildRequires:    R-CRAN-extraDistr 
BuildRequires:    R-CRAN-ergm 
BuildRequires:    R-CRAN-Bergm 
BuildRequires:    R-CRAN-sandwich 
BuildRequires:    R-CRAN-QRM 
Requires:         R-CRAN-bain 
Requires:         R-stats 
Requires:         R-utils 
Requires:         R-CRAN-MASS 
Requires:         R-CRAN-mvtnorm 
Requires:         R-CRAN-pracma 
Requires:         R-CRAN-lme4 
Requires:         R-CRAN-extraDistr 
Requires:         R-CRAN-ergm 
Requires:         R-CRAN-Bergm 
Requires:         R-CRAN-sandwich 
Requires:         R-CRAN-QRM 

%description
Implementation of default Bayes factors for testing statistical hypotheses
under various statistical models. The package is intended for applied
quantitative researchers in the social and behavioral sciences, medical
research, and related fields. The Bayes factor tests can be executed for
statistical models such as univariate and multivariate normal linear
models, correlation analysis, generalized linear models, special cases of
linear mixed models, survival models, relational event models. Parameters
that can be tested are location parameters (e.g., group means, regression
coefficients), variances (e.g., group variances), and measures of
association (e.g,. polychoric/polyserial/biserial/tetrachoric/product
moments correlations), among others. The statistical underpinnings are
described in Mulder and Xin (2019) <DOI:10.1080/00273171.2021.1904809>,
Mulder and Gelissen (2019) <DOI:10.1080/02664763.2021.1992360>, Mulder
(2016) <DOI:10.1016/j.jmp.2014.09.004>, Mulder and Fox (2019)
<DOI:10.1214/18-BA1115>, Mulder and Fox (2013)
<DOI:10.1007/s11222-011-9295-3>, Boeing-Messing, van Assen, Hofman,
Hoijtink, and Mulder (2017) <DOI:10.1037/met0000116>, Hoijtink, Mulder,
van Lissa, and Gu, (2018) <DOI:10.31234/osf.io/v3shc>, Gu, Mulder, and
Hoijtink, (2018) <DOI:10.1111/bmsp.12110>, Hoijtink, Gu, and Mulder,
(2018) <DOI:10.1111/bmsp.12145>, and Hoijtink, Gu, Mulder, and Rosseel,
(2018) <DOI:10.1037/met0000187>. When using the packages, please refer to
Mulder et al. (2021) <DOI:10.18637/jss.v100.i18>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}