%global __brp_check_rpaths %{nil}
%global packname  YPBP
%global packver   0.0.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.0.1
Release:          2%{?dist}%{?buildtag}
Summary:          Yang and Prentice Model with Baseline Distribution Modeled byBernstein Polynomials

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.4.0
Requires:         R-core >= 3.4.0
BuildRequires:    R-CRAN-rstan >= 2.18.1
BuildRequires:    R-CRAN-StanHeaders >= 2.18.0
BuildRequires:    R-CRAN-rstantools >= 2.0.0
BuildRequires:    R-CRAN-BH >= 1.66.0
BuildRequires:    R-CRAN-RcppEigen >= 0.3.3.3.0
BuildRequires:    R-CRAN-Rcpp >= 0.12.0
BuildRequires:    R-survival 
BuildRequires:    R-CRAN-Formula 
BuildRequires:    R-MASS 
BuildRequires:    R-methods 
Requires:         R-CRAN-rstan >= 2.18.1
Requires:         R-CRAN-rstantools >= 2.0.0
Requires:         R-CRAN-Rcpp >= 0.12.0
Requires:         R-survival 
Requires:         R-CRAN-Formula 
Requires:         R-MASS 
Requires:         R-methods 

%description
Semiparametric modeling of lifetime data with crossing survival curves via
Yang and Prentice model with baseline hazard/odds modeled with Bernstein
polynomials. Details about the model can be found in Demarqui et al.
(2019) <arXiv:1910.04475>. Model fitting can be carried out via both
maximum likelihood and Bayesian approaches. The package also provides
point and interval estimation for the crossing survival times.

%prep
%setup -q -c -n %{packname}

find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}