Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1d9' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7531047-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 0.73 PID: 6264 Logging PID: 6265 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'bootstrap': 'off', 'build_id': 7531047, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'e61abbf15acfa6d8131ea89f55ae9a4877189b21', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-BayesSurvive', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-CRAN-BayesSurvive', 'package_version': '0.0.2-1.copr7531047', 'project_dirname': 'cran', 'project_name': 'cran', 'project_owner': 'iucar', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/iucar/cran/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'iucar/cran--iucar', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'iucar', 'tags': [], 'task_id': '7531047-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-BayesSurvive /var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-BayesSurvive', '/var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive'... Running: git checkout e61abbf15acfa6d8131ea89f55ae9a4877189b21 -- cmd: ['git', 'checkout', 'e61abbf15acfa6d8131ea89f55ae9a4877189b21', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive rc: 0 stdout: stderr: Note: switching to 'e61abbf15acfa6d8131ea89f55ae9a4877189b21'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at e61abbf automatic import of R-CRAN-BayesSurvive Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive rc: 0 stdout: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading BayesSurvive_0.0.2.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o BayesSurvive_0.0.2.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-BayesSurvive/BayesSurvive_0.0.2.tar.gz/md5/f13831af7c227cbc19f2ade577b30ce4/BayesSurvive_0.0.2.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 1136k 100 1136k 0 0 12.5M 0 --:--:-- --:--:-- --:--:-- 12.7M INFO: Reading stdout from command: md5sum BayesSurvive_0.0.2.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive/R-CRAN-BayesSurvive.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717550461.191782 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive/R-CRAN-BayesSurvive.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717550461.191782 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive/R-CRAN-BayesSurvive.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1717550461.191782/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 5.0 MiB/s | 21.1 MiB | 00m04s Copr repository 100% | 51.6 MiB/s | 11.9 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.26-3.fc40 fedora 8.1 MiB bzip2 x86_64 1.0.8-18.fc40 fedora 91.7 KiB coreutils x86_64 9.5-1.fc41 fedora 5.5 MiB cpio x86_64 2.15-1.fc40 fedora 1.1 MiB diffutils x86_64 3.10-5.fc40 fedora 1.6 MiB fedora-release-common noarch 41-0.13 fedora 19.2 KiB findutils x86_64 1:4.10.0-1.fc41 fedora 1.8 MiB gawk x86_64 5.3.0-3.fc40 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.39.9000-18.fc41 fedora 0.0 B grep x86_64 3.11-8.fc41 fedora 1.0 MiB gzip x86_64 1.13-1.fc40 fedora 385.0 KiB info x86_64 7.1-2.fc40 fedora 357.8 KiB patch x86_64 2.7.6-24.fc40 fedora 262.8 KiB redhat-rpm-config noarch 292-1.fc41 fedora 183.5 KiB rpm-build x86_64 4.19.91-6.fc41 fedora 194.1 KiB sed x86_64 4.9-1.fc40 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-5.fc41 fedora 4.1 MiB tar x86_64 2:1.35-3.fc40 fedora 2.9 MiB unzip x86_64 6.0-63.fc40 fedora 382.8 KiB util-linux x86_64 2.40.1-1.fc41 fedora 3.7 MiB which x86_64 2.21-41.fc40 fedora 80.2 KiB xz x86_64 1:5.4.6-3.fc41 fedora 2.0 MiB Installing dependencies: add-determinism-nopython x86_64 0.2.0-9.fc41 fedora 2.5 MiB alternatives x86_64 1.27-1.fc41 fedora 66.3 KiB ansible-srpm-macros noarch 1-15.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.1-2.fc41 fedora 327.3 KiB authselect x86_64 1.5.0-5.fc41 fedora 153.6 KiB authselect-libs x86_64 1.5.0-5.fc41 fedora 818.2 KiB basesystem noarch 11-20.fc40 fedora 0.0 B binutils x86_64 2.42.50-11.fc41 fedora 27.5 MiB binutils-gold x86_64 2.42.50-11.fc41 fedora 2.0 MiB build-reproducibility-srpm-macros noarch 0.2.0-9.fc41 fedora 769.0 B bzip2-libs x86_64 1.0.8-18.fc40 fedora 80.7 KiB ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 fedora 2.3 MiB coreutils-common x86_64 9.5-1.fc41 fedora 11.2 MiB cracklib x86_64 2.9.11-5.fc40 fedora 238.9 KiB crypto-policies noarch 20240521-1.gitf71d135.fc41 fedora 120.0 KiB curl x86_64 8.8.0-1.fc41 fedora 743.7 KiB cyrus-sasl-lib x86_64 2.1.28-22.fc41 fedora 2.3 MiB debugedit x86_64 5.0-16.fc41 fedora 199.3 KiB dwz x86_64 0.15-6.fc40 fedora 290.9 KiB ed x86_64 1.20.2-1.fc41 fedora 146.8 KiB efi-srpm-macros noarch 5-11.fc40 fedora 40.1 KiB elfutils x86_64 0.191-7.fc41 fedora 2.5 MiB elfutils-debuginfod-client x86_64 0.191-7.fc41 fedora 64.9 KiB elfutils-default-yama-scope noarch 0.191-7.fc41 fedora 1.8 KiB elfutils-libelf x86_64 0.191-7.fc41 fedora 1.2 MiB elfutils-libs x86_64 0.191-7.fc41 fedora 646.1 KiB fedora-gpg-keys noarch 41-0.2 fedora 124.7 KiB fedora-release noarch 41-0.13 fedora 0.0 B fedora-release-identity-basic noarch 41-0.13 fedora 694.0 B fedora-repos noarch 41-0.2 fedora 4.9 KiB fedora-repos-rawhide noarch 41-0.2 fedora 2.2 KiB file x86_64 5.45-5.fc41 fedora 103.5 KiB file-libs x86_64 5.45-5.fc41 fedora 9.9 MiB filesystem x86_64 3.18-9.fc41 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-14.fc40 fedora 55.3 KiB forge-srpm-macros noarch 0.3.1-1.fc41 fedora 39.0 KiB fpc-srpm-macros noarch 1.3-12.fc40 fedora 144.0 B gdb-minimal x86_64 14.2-9.fc41 fedora 12.7 MiB gdbm x86_64 1:1.23-6.fc40 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-6.fc40 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.1-1.fc41 fedora 747.0 B glibc x86_64 2.39.9000-18.fc41 fedora 6.7 MiB glibc-common x86_64 2.39.9000-18.fc41 fedora 1.0 MiB glibc-gconv-extra x86_64 2.39.9000-18.fc41 fedora 7.8 MiB gmp x86_64 1:6.3.0-1.fc41 fedora 803.4 KiB gnat-srpm-macros noarch 6-5.fc40 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-1.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-9.fc40 fedora 88.3 KiB kernel-srpm-macros noarch 1.0-23.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-3.fc40 fedora 54.4 KiB krb5-libs x86_64 1.21.2-5.fc40 fedora 2.3 MiB libacl x86_64 2.3.2-1.fc40 fedora 40.0 KiB libarchive x86_64 3.7.4-1.fc41 fedora 914.6 KiB libattr x86_64 2.5.2-3.fc40 fedora 28.5 KiB libblkid x86_64 2.40.1-1.fc41 fedora 258.5 KiB libbrotli x86_64 1.1.0-3.fc40 fedora 829.5 KiB libcap x86_64 2.70-1.fc41 fedora 220.3 KiB libcap-ng x86_64 0.8.5-1.fc41 fedora 69.1 KiB libcom_err x86_64 1.47.0-5.fc40 fedora 67.2 KiB libcurl x86_64 8.8.0-1.fc41 fedora 805.7 KiB libeconf x86_64 0.6.2-2.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-13.fc41 fedora 895.6 KiB libfdisk x86_64 2.40.1-1.fc41 fedora 362.9 KiB libffi x86_64 3.4.6-1.fc41 fedora 82.4 KiB libgcc x86_64 14.1.1-4.fc41 fedora 270.6 KiB libgomp x86_64 14.1.1-4.fc41 fedora 519.5 KiB libidn2 x86_64 2.3.7-1.fc40 fedora 329.1 KiB libmount x86_64 2.40.1-1.fc41 fedora 351.8 KiB libnghttp2 x86_64 1.62.0-1.fc41 fedora 166.1 KiB libnsl2 x86_64 2.0.1-1.fc40 fedora 57.9 KiB libpkgconf x86_64 2.1.1-1.fc41 fedora 74.2 KiB libpsl x86_64 0.21.5-3.fc40 fedora 80.5 KiB libpwquality x86_64 1.4.5-9.fc40 fedora 417.8 KiB libselinux x86_64 3.6-4.fc40 fedora 173.0 KiB libsemanage x86_64 3.6-3.fc40 fedora 293.5 KiB libsepol x86_64 3.6-3.fc40 fedora 802.0 KiB libsmartcols x86_64 2.40.1-1.fc41 fedora 180.4 KiB libssh x86_64 0.10.6-6.fc41 fedora 513.3 KiB libssh-config noarch 0.10.6-6.fc41 fedora 277.0 B libstdc++ x86_64 14.1.1-4.fc41 fedora 2.8 MiB libtasn1 x86_64 4.19.0-6.fc40 fedora 175.7 KiB libtirpc x86_64 1.3.4-1.rc3.fc41 fedora 202.8 KiB libtool-ltdl x86_64 2.4.7-11.fc41 fedora 66.1 KiB libunistring x86_64 1.1-7.fc41 fedora 1.7 MiB libutempter x86_64 1.2.1-13.fc40 fedora 57.7 KiB libuuid x86_64 2.40.1-1.fc41 fedora 37.4 KiB libverto x86_64 0.3.2-8.fc40 fedora 29.5 KiB libxcrypt x86_64 4.4.36-5.fc40 fedora 262.8 KiB libxml2 x86_64 2.12.7-1.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-1.fc41 fedora 787.9 KiB lua-libs x86_64 5.4.6-5.fc40 fedora 281.1 KiB lua-srpm-macros noarch 1-13.fc40 fedora 1.3 KiB lz4-libs x86_64 1.9.4-6.fc40 fedora 129.4 KiB mpfr x86_64 4.2.1-4.fc41 fedora 828.0 KiB ncurses-base noarch 6.4-12.20240127.fc40 fedora 326.2 KiB ncurses-libs x86_64 6.4-12.20240127.fc40 fedora 963.2 KiB ocaml-srpm-macros noarch 10-2.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-17.fc41 fedora 112.0 B openldap x86_64 2.6.8-1.fc41 fedora 636.3 KiB openssl-libs x86_64 1:3.2.1-6.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.3-4.fc40 fedora 2.2 MiB p11-kit-trust x86_64 0.25.3-4.fc40 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-11.fc40 fedora 1.6 KiB pam x86_64 1.6.1-3.fc41 fedora 1.8 MiB pam-libs x86_64 1.6.1-3.fc41 fedora 135.0 KiB pcre2 x86_64 10.43-2.fc41.1 fedora 653.5 KiB pcre2-syntax noarch 10.43-2.fc41.1 fedora 249.0 KiB perl-srpm-macros noarch 1-53.fc40 fedora 861.0 B pkgconf x86_64 2.1.1-1.fc41 fedora 82.9 KiB pkgconf-m4 noarch 2.1.1-1.fc41 fedora 13.9 KiB pkgconf-pkg-config x86_64 2.1.1-1.fc41 fedora 989.0 B popt x86_64 1.19-6.fc40 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 fedora 67.5 KiB pyproject-srpm-macros noarch 1.12.0-1.fc40 fedora 1.5 KiB python-srpm-macros noarch 3.12-9.fc41 fedora 50.5 KiB qt5-srpm-macros noarch 5.15.14-1.fc41 fedora 500.0 B qt6-srpm-macros noarch 6.7.1-1.fc41 fedora 456.0 B readline x86_64 8.2-8.fc40 fedora 489.2 KiB rpm x86_64 4.19.91-6.fc41 fedora 3.0 MiB rpm-build-libs x86_64 4.19.91-6.fc41 fedora 206.6 KiB rpm-libs x86_64 4.19.91-6.fc41 fedora 713.9 KiB rpm-sequoia x86_64 1.6.0-3.fc41 fedora 2.2 MiB rust-srpm-macros noarch 26.3-1.fc41 fedora 4.8 KiB setup noarch 2.15.0-3.fc41 fedora 720.7 KiB sqlite-libs x86_64 3.45.3-1.fc41 fedora 1.4 MiB systemd-libs x86_64 256~rc3-4.fc41 fedora 2.0 MiB util-linux-core x86_64 2.40.1-1.fc41 fedora 1.5 MiB xxhash-libs x86_64 0.8.2-2.fc40 fedora 88.5 KiB xz-libs x86_64 1:5.4.6-3.fc41 fedora 209.8 KiB zig-srpm-macros noarch 1-2.fc40 fedora 1.1 KiB zip x86_64 3.0-40.fc40 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.6-4.fc41 fedora 134.0 KiB zstd x86_64 1.5.6-1.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 155 packages Total size of inbound packages is 54 MiB. Need to download 54 MiB. After this operation 182 MiB will be used (install 182 MiB, remove 0 B). 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-------------------------------------------------------------------------------- [155/155] Total 100% | 40.5 MiB/s | 53.8 MiB | 00m01s Running transaction Importing PGP key 0xE99D6AD1: Userid : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0xE99D6AD1: Userid : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0xA15B79CC: Userid : "Fedora (40) " Fingerprint: 115DF9AEF857853EE8445D0A0727707EA15B79CC From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary The key was successfully imported. [ 1/157] Verify package files 100% | 625.0 B/s | 155.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-9.fc41.x86_64 >>> Stop pre-transaction scriptlet: filesystem-0:3.18-9.fc41.x86_64 [ 2/157] Prepare transaction 100% | 1.9 KiB/s | 155.0 B | 00m00s [ 3/157] Installing libgcc-0:14.1.1-4. 100% | 133.0 MiB/s | 272.3 KiB | 00m00s >>> Running post-install scriptlet: libgcc-0:14.1.1-4.fc41.x86_64 >>> Stop post-install scriptlet: libgcc-0:14.1.1-4.fc41.x86_64 [ 4/157] Installing crypto-policies-0: 100% | 14.4 MiB/s | 147.0 KiB | 00m00s >>> Running post-install scriptlet: crypto-policies-0:20240521-1.gitf71d135.fc41 >>> Stop post-install scriptlet: crypto-policies-0:20240521-1.gitf71d135.fc41.no [ 5/157] Installing fedora-release-ide 100% | 929.7 KiB/s | 952.0 B | 00m00s [ 6/157] Installing fedora-repos-rawhi 100% | 2.4 MiB/s | 2.4 KiB | 00m00s [ 7/157] Installing fedora-gpg-keys-0: 100% | 20.7 MiB/s | 169.7 KiB | 00m00s [ 8/157] Installing fedora-repos-0:41- 100% | 5.6 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20/157] Installing ncurses-libs-0:6.4 100% | 135.3 MiB/s | 969.7 KiB | 00m00s >>> Running pre-install scriptlet: glibc-0:2.39.9000-18.fc41.x86_64 >>> Stop pre-install scriptlet: glibc-0:2.39.9000-18.fc41.x86_64 [ 21/157] Installing glibc-0:2.39.9000- 100% | 117.9 MiB/s | 6.7 MiB | 00m00s >>> Running post-install scriptlet: glibc-0:2.39.9000-18.fc41.x86_64 >>> Stop post-install scriptlet: glibc-0:2.39.9000-18.fc41.x86_64 [ 22/157] Installing bash-0:5.2.26-3.fc 100% | 263.3 MiB/s | 8.2 MiB | 00m00s >>> Running post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64 >>> Stop post-install scriptlet: bash-0:5.2.26-3.fc40.x86_64 [ 23/157] Installing glibc-common-0:2.3 100% | 114.2 MiB/s | 1.0 MiB | 00m00s [ 24/157] Installing glibc-gconv-extra- 100% | 128.9 MiB/s | 7.9 MiB | 00m00s >>> Running post-install scriptlet: glibc-gconv-extra-0:2.39.9000-18.fc41.x86_64 >>> Stop post-install scriptlet: glibc-gconv-extra-0:2.39.9000-18.fc41.x86_64 [ 25/157] Installing zlib-ng-compat-0:2 100% | 131.6 MiB/s 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00m00s [151/157] Installing python-srpm-macros 100% | 50.5 MiB/s | 51.7 KiB | 00m00s [152/157] Installing redhat-rpm-config- 100% | 23.2 MiB/s | 190.0 KiB | 00m00s [153/157] Installing rpm-build-0:4.19.9 100% | 28.3 MiB/s | 202.6 KiB | 00m00s [154/157] Installing pyproject-srpm-mac 100% | 691.4 KiB/s | 2.1 KiB | 00m00s [155/157] Installing util-linux-0:2.40. 100% | 73.4 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.1-1.fc41.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40.1-1.fc41.x86_64 [156/157] Installing which-0:2.21-41.fc 100% | 40.3 MiB/s | 82.4 KiB | 00m00s [157/157] Installing info-0:7.1-2.fc40. 100% | 271.5 KiB/s | 358.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-9.fc41.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-9.fc41.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.91-6.fc41.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.91-6.fc41.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-18.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-18.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-nopython-0.2.0-9.fc41.x86_64 alternatives-1.27-1.fc41.x86_64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-11.fc41.x86_64 binutils-gold-2.42.50-11.fc41.x86_64 build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.x86_64 coreutils-common-9.5-1.fc41.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-22.fc41.x86_64 debugedit-5.0-16.fc41.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-4.10.0-1.fc41.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-9.fc41.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.x86_64 glibc-common-2.39.9000-18.fc41.x86_64 glibc-gconv-extra-2.39.9000-18.fc41.x86_64 glibc-minimal-langpack-2.39.9000-18.fc41.x86_64 gmp-6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch gpg-pubkey-a15b79cc-63d04c2c gpg-pubkey-e99d6ad1-64d2612c grep-3.11-8.fc41.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.4-1.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40.1-1.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.70-1.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.8.0-1.fc41.x86_64 libeconf-0.6.2-2.fc41.x86_64 libevent-2.1.12-13.fc41.x86_64 libfdisk-2.40.1-1.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.1.1-4.fc41.x86_64 libgomp-14.1.1-4.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40.1-1.fc41.x86_64 libnghttp2-1.62.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.1-1.fc41.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40.1-1.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.1.1-4.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-11.fc41.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40.1-1.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.7-1.fc41.x86_64 libzstd-1.5.6-1.fc41.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-4.fc41.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-10-2.fc41.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.8-1.fc41.x86_64 openssl-libs-3.2.1-6.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc41.x86_64 pam-libs-1.6.1-3.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.43-2.fc41.1.x86_64 pcre2-syntax-10.43-2.fc41.1.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-1.fc41.x86_64 pkgconf-m4-2.1.1-1.fc41.noarch pkgconf-pkg-config-2.1.1-1.fc41.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.14-1.fc41.noarch qt6-srpm-macros-6.7.1-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-292-1.fc41.noarch rpm-4.19.91-6.fc41.x86_64 rpm-build-4.19.91-6.fc41.x86_64 rpm-build-libs-4.19.91-6.fc41.x86_64 rpm-libs-4.19.91-6.fc41.x86_64 rpm-sequoia-1.6.0-3.fc41.x86_64 rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.15.0-3.fc41.noarch shadow-utils-4.15.1-5.fc41.x86_64 sqlite-libs-3.45.3-1.fc41.x86_64 systemd-libs-256~rc3-4.fc41.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40.1-1.fc41.x86_64 util-linux-core-2.40.1-1.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-3.fc41.x86_64 xz-libs-5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-4.fc41.x86_64 zstd-1.5.6-1.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-x86_64-1717550461.191782/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1717550461.191782/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-p75v95_z/R-CRAN-BayesSurvive/R-CRAN-BayesSurvive.spec) Config(child) 0 minutes 23 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm) Config(fedora-rawhide-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1717550461.191782/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Finish: chroot init Start: build phase for R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm Start: build setup for R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Wrote: /builddir/build/SRPMS/R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Updating and loading repositories: fedora 100% | 172.2 KiB/s | 4.1 KiB | 00m00s Copr repository 100% | 5.7 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 48.8 MiB/s | 11.9 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-CRAN-GGally noarch 2.2.1-1.fc41.copr7370314 copr_base 2.3 MiB R-CRAN-Rcpp x86_64 1.0.12-1.fc41.copr7349917 copr_base 8.3 MiB R-CRAN-RcppArmadillo x86_64 0.12.8.4.0-1.fc41.copr7515874 copr_base 6.0 MiB R-CRAN-ggplot2 noarch 3.5.1-1.fc41.copr7361224 copr_base 7.1 MiB R-CRAN-mvtnorm x86_64 1.2.5-1.fc41.copr7474908 copr_base 1.2 MiB R-CRAN-riskRegression x86_64 2023.12.21-1.fc41.copr7368952 copr_base 2.3 MiB R-CRAN-survival x86_64 3.6.4-1.fc41.copr7357273 copr_base 8.6 MiB R-core x86_64 4.4.0-1.fc41~bootstrap copr_base 100.5 MiB R-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 0.0 B Installing dependencies: R-CRAN-Formula noarch 1.2.5-1.fc41.copr7350002 copr_base 205.4 KiB R-CRAN-Hmisc x86_64 5.1.3-1.fc41.copr7501288 copr_base 5.2 MiB R-CRAN-KernSmooth x86_64 2.23.24-1.fc41.copr7456099 copr_base 145.3 KiB R-CRAN-MASS x86_64 7.3.60.2-1.fc41.copr7382389 copr_base 1.8 MiB R-CRAN-Matrix x86_64 1.7.0-1.fc41.copr7382390 copr_base 8.0 MiB R-CRAN-MatrixModels noarch 0.5.3-1.fc41.copr7356087 copr_base 520.9 KiB R-CRAN-Publish noarch 2023.01.17-1.fc41.copr7363224 copr_base 724.4 KiB R-CRAN-R6 noarch 2.5.1-1.fc41.copr7349938 copr_base 115.9 KiB R-CRAN-RColorBrewer noarch 1.1.3-1.fc41.copr7349948 copr_base 63.6 KiB R-CRAN-SQUAREM noarch 2021.1-1.fc41.copr7350068 copr_base 242.7 KiB R-CRAN-SparseM x86_64 1.83-1.fc41.copr7511590 copr_base 1.8 MiB R-CRAN-TH.data noarch 1.1.2-1.fc41.copr7357939 copr_base 8.8 MiB R-CRAN-backports x86_64 1.5.0-1.fc41.copr7483453 copr_base 211.8 KiB R-CRAN-base64enc x86_64 0.1.3-3.fc41.copr7349951 copr_base 51.7 KiB R-CRAN-bit x86_64 4.0.5-1.fc41.copr7349969 copr_base 1.5 MiB R-CRAN-bit64 x86_64 4.0.5-1.fc41.copr7353647 copr_base 888.0 KiB R-CRAN-broom noarch 1.0.6-1.fc41.copr7456083 copr_base 3.3 MiB R-CRAN-broom.helpers noarch 1.15.0-1.fc41.copr7369214 copr_base 1.1 MiB R-CRAN-bslib noarch 0.7.0-1.fc41.copr7359007 copr_base 10.0 MiB R-CRAN-cachem x86_64 1.1.0-1.fc41.copr7452047 copr_base 104.7 KiB R-CRAN-checkmate x86_64 2.3.1-1.fc41.copr7353592 copr_base 1.4 MiB R-CRAN-cli x86_64 3.6.2-1.fc41.copr7349961 copr_base 2.4 MiB R-CRAN-clipr noarch 0.8.0-1.fc41.copr7349958 copr_base 85.0 KiB R-CRAN-cluster x86_64 2.1.6-1.fc41.copr7352635 copr_base 996.2 KiB R-CRAN-cmprsk x86_64 2.2.12-1.fc41.copr7462405 copr_base 140.2 KiB R-CRAN-codetools noarch 0.2.20-1.fc41.copr7352636 copr_base 106.3 KiB R-CRAN-colorspace x86_64 2.1.0-1.fc41.copr7349953 copr_base 4.0 MiB R-CRAN-crayon noarch 1.5.2-1.fc41.copr7349942 copr_base 232.3 KiB R-CRAN-data.table x86_64 1.15.4-1.fc41.copr7349979 copr_base 3.8 MiB R-CRAN-diagram noarch 1.6.5-1.fc41.copr7354103 copr_base 911.1 KiB R-CRAN-digest x86_64 0.6.35-1.fc41.copr7349925 copr_base 484.1 KiB R-CRAN-doParallel noarch 1.0.17-1.fc41.copr7356118 copr_base 224.6 KiB R-CRAN-dplyr x86_64 1.1.4-1.fc41.copr7361225 copr_base 2.6 MiB R-CRAN-evaluate noarch 0.23-1.fc41.copr7349992 copr_base 122.1 KiB R-CRAN-fansi x86_64 1.0.6-1.fc41.copr7349952 copr_base 625.8 KiB R-CRAN-farver x86_64 2.1.2-1.fc41.copr7442181 copr_base 2.1 MiB R-CRAN-fastmap x86_64 1.2.0-1.fc41.copr7447859 copr_base 108.5 KiB R-CRAN-fontawesome noarch 0.5.2-1.fc41.copr7357346 copr_base 2.0 MiB R-CRAN-forcats noarch 1.0.0-1.fc41.copr7361229 copr_base 568.9 KiB R-CRAN-foreach noarch 1.5.2-1.fc41.copr7353650 copr_base 378.1 KiB R-CRAN-foreign x86_64 0.8.86-1.fc41.copr7352637 copr_base 528.8 KiB R-CRAN-fs x86_64 1.6.4-1.fc41.copr7373524 copr_base 597.0 KiB R-CRAN-future noarch 1.33.2-1.fc41.copr7356063 copr_base 1.2 MiB R-CRAN-future.apply noarch 1.11.2-1.fc41.copr7357936 copr_base 232.0 KiB R-CRAN-generics noarch 0.1.3-1.fc41.copr7350006 copr_base 160.2 KiB R-CRAN-ggstats noarch 0.6.0-1.fc41.copr7370275 copr_base 1.3 MiB R-CRAN-globals noarch 0.16.3-1.fc41.copr7353590 copr_base 137.2 KiB R-CRAN-glue x86_64 1.7.0-1.fc41.copr7349919 copr_base 261.2 KiB R-CRAN-gridExtra noarch 2.3-3.fc41.copr7357925 copr_base 1.6 MiB R-CRAN-gtable noarch 0.3.5-1.fc41.copr7356060 copr_base 306.7 KiB R-CRAN-haven x86_64 2.5.4-1.fc41.copr7364939 copr_base 923.9 KiB R-CRAN-highr noarch 0.11-1.fc41.copr7494448 copr_base 65.2 KiB R-CRAN-hms noarch 1.1.3-1.fc41.copr7357932 copr_base 132.4 KiB R-CRAN-htmlTable noarch 2.4.2-1.fc41.copr7362440 copr_base 1.2 MiB R-CRAN-htmltools x86_64 0.5.8.1-1.fc41.copr7353596 copr_base 522.9 KiB R-CRAN-htmlwidgets noarch 1.6.4-1.fc41.copr7361223 copr_base 2.0 MiB R-CRAN-isoband x86_64 0.2.7-1.fc41.copr7351195 copr_base 1.9 MiB R-CRAN-iterators noarch 1.0.14-1.fc41.copr7350017 copr_base 438.6 KiB R-CRAN-jquerylib noarch 0.1.4-1.fc41.copr7357136 copr_base 1.5 MiB R-CRAN-jsonlite x86_64 1.8.8-1.fc41.copr7349934 copr_base 2.3 MiB R-CRAN-knitr noarch 1.47-1.fc41.copr7511551 copr_base 1.7 MiB R-CRAN-labeling noarch 0.4.3-1.fc41.copr7349947 copr_base 92.7 KiB R-CRAN-labelled noarch 2.13.0-1.fc41.copr7367196 copr_base 683.0 KiB R-CRAN-lattice x86_64 0.22.6-1.fc41.copr7352639 copr_base 2.0 MiB R-CRAN-lava noarch 1.8.0-1.fc41.copr7359546 copr_base 3.2 MiB R-CRAN-lifecycle noarch 1.0.4-1.fc41.copr7354340 copr_base 282.7 KiB R-CRAN-listenv noarch 0.9.1-1.fc41.copr7349926 copr_base 157.8 KiB R-CRAN-magrittr x86_64 2.0.3-1.fc41.copr7349936 copr_base 417.3 KiB R-CRAN-memoise noarch 2.0.1-1.fc41.copr7356088 copr_base 83.7 KiB R-CRAN-mets x86_64 1.3.4-1.fc41.copr7363672 copr_base 7.9 MiB R-CRAN-mgcv x86_64 1.9.1-1.fc41.copr7357272 copr_base 4.5 MiB R-CRAN-mime x86_64 0.12-1.fc41.copr7349941 copr_base 55.1 KiB R-CRAN-multcomp noarch 1.4.25-1.fc41.copr7359547 copr_base 1.1 MiB R-CRAN-munsell noarch 0.5.1-1.fc41.copr7353599 copr_base 379.0 KiB R-CRAN-nlme x86_64 3.1.164-1.fc41.copr7355272 copr_base 3.8 MiB R-CRAN-nnet x86_64 7.3.19-1.fc41.copr7352641 copr_base 167.6 KiB R-CRAN-numDeriv noarch 2016.8.1.1-3.fc41.copr7350037 copr_base 151.0 KiB R-CRAN-parallelly x86_64 1.37.1-1.fc41.copr7352653 copr_base 551.7 KiB R-CRAN-patchwork noarch 1.2.0-1.fc41.copr7363400 copr_base 4.1 MiB R-CRAN-pillar noarch 1.9.0-1.fc41.copr7357931 copr_base 1.4 MiB R-CRAN-pkgconfig noarch 2.0.3-3.fc41.copr7349937 copr_base 34.0 KiB R-CRAN-plotrix noarch 3.8.4-1.fc41.copr7350217 copr_base 1.9 MiB R-CRAN-plyr x86_64 1.8.9-1.fc41.copr7353597 copr_base 1.1 MiB R-CRAN-polspline x86_64 1.1.25-1.fc41.copr7435322 copr_base 943.7 KiB R-CRAN-prettyunits noarch 1.2.0-1.fc41.copr7349962 copr_base 191.8 KiB R-CRAN-prodlim x86_64 2023.08.28-1.fc41.copr7361236 copr_base 595.6 KiB R-CRAN-progress noarch 1.2.3-1.fc41.copr7359533 copr_base 118.0 KiB R-CRAN-progressr noarch 0.14.0-1.fc41.copr7355098 copr_base 1.5 MiB R-CRAN-purrr x86_64 1.0.2-1.fc41.copr7357927 copr_base 878.1 KiB R-CRAN-quantreg x86_64 5.98-1.fc41.copr7494458 copr_base 2.0 MiB R-CRAN-ranger x86_64 0.16.0-1.fc41.copr7356175 copr_base 772.8 KiB R-CRAN-rappdirs x86_64 0.3.3-1.fc41.copr7350054 copr_base 86.4 KiB R-CRAN-readr x86_64 2.1.5-1.fc41.copr7362418 copr_base 1.4 MiB R-CRAN-rlang x86_64 1.1.3-1.fc41.copr7349924 copr_base 2.6 MiB R-CRAN-rmarkdown noarch 2.27-1.fc41.copr7456110 copr_base 6.8 MiB 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fedora 425.9 KiB libXtst x86_64 1.2.4-6.fc40 fedora 33.6 KiB libb2 x86_64 0.98.1-11.fc40 fedora 42.2 KiB libblkid-devel x86_64 2.40.1-1.fc41 fedora 44.9 KiB libdatrie x86_64 0.2.13-9.fc40 fedora 57.9 KiB libffi-devel x86_64 3.4.6-1.fc41 fedora 33.1 KiB libfontenc x86_64 1.1.8-1.fc41 fedora 67.0 KiB libgfortran x86_64 14.1.1-4.fc41 fedora 2.9 MiB libicu x86_64 74.2-1.fc40 fedora 34.9 MiB libicu-devel x86_64 74.2-1.fc40 fedora 5.6 MiB libjpeg-turbo x86_64 3.0.2-2.fc41 fedora 772.9 KiB liblerc x86_64 4.0.0-6.fc40 fedora 603.5 KiB libmount-devel x86_64 2.40.1-1.fc41 fedora 63.5 KiB libmpc x86_64 1.3.1-5.fc40 fedora 164.7 KiB libpng x86_64 2:1.6.40-3.fc40 fedora 241.8 KiB libpng-devel x86_64 2:1.6.40-3.fc40 fedora 881.5 KiB libquadmath x86_64 14.1.1-4.fc41 fedora 325.9 KiB libquadmath-devel x86_64 14.1.1-4.fc41 fedora 21.8 KiB libselinux-devel x86_64 3.6-4.fc40 fedora 126.1 KiB libsepol-devel x86_64 3.6-3.fc40 fedora 120.2 KiB libstdc++-devel x86_64 14.1.1-4.fc41 fedora 15.4 MiB libtextstyle x86_64 0.22.5-2.fc41 fedora 195.6 KiB libthai x86_64 0.1.29-8.fc40 fedora 783.5 KiB libtiff x86_64 4.6.0-2.fc40 fedora 1.1 MiB libtirpc-devel x86_64 1.3.4-1.rc3.fc41 fedora 251.6 KiB libwebp x86_64 1.4.0-1.fc41 fedora 802.7 KiB libxcb x86_64 1.17.0-1.fc41 fedora 1.1 MiB libxcb-devel x86_64 1.17.0-1.fc41 fedora 2.7 MiB libxcrypt-devel x86_64 4.4.36-5.fc40 fedora 30.3 KiB libxml2-devel x86_64 2.12.7-1.fc41 fedora 3.4 MiB lksctp-tools x86_64 1.0.19-8.fc41 fedora 275.2 KiB lua x86_64 5.4.6-5.fc40 fedora 597.8 KiB lua-posix x86_64 36.2.1-6.fc40 fedora 599.7 KiB make x86_64 1:4.4.1-6.fc40 fedora 1.8 MiB mkfontscale x86_64 1.2.2-6.fc40 fedora 49.2 KiB mpdecimal x86_64 2.5.1-9.fc40 fedora 200.9 KiB ncurses x86_64 6.4-12.20240127.fc40 fedora 621.0 KiB nettle x86_64 3.9.1-6.fc40 fedora 790.1 KiB nspr x86_64 4.35.0-23.fc41 fedora 312.4 KiB nss x86_64 3.100.0-1.fc41 fedora 1.9 MiB nss-softokn x86_64 3.100.0-1.fc41 fedora 1.9 MiB nss-softokn-freebl x86_64 3.100.0-1.fc41 fedora 896.4 KiB nss-sysinit x86_64 3.100.0-1.fc41 fedora 18.2 KiB nss-util x86_64 3.100.0-1.fc41 fedora 226.1 KiB openblas x86_64 0.3.26-4.fc40 fedora 96.0 KiB openblas-openmp x86_64 0.3.26-4.fc40 fedora 38.9 MiB openblas-openmp64 x86_64 0.3.26-4.fc40 fedora 39.1 MiB pango x86_64 1.52.2-1.fc41 fedora 995.8 KiB pcre2-devel x86_64 10.43-2.fc41.1 fedora 2.0 MiB pcre2-utf16 x86_64 10.43-2.fc41.1 fedora 590.0 KiB pcre2-utf32 x86_64 10.43-2.fc41.1 fedora 557.9 KiB perl-AutoLoader noarch 5.74-507.fc41 fedora 20.5 KiB perl-B x86_64 1.88-507.fc41 fedora 492.4 KiB perl-Carp noarch 1.54-502.fc40 fedora 46.5 KiB perl-Class-Struct noarch 0.68-507.fc41 fedora 25.4 KiB perl-Data-Dumper x86_64 2.189-504.fc41 fedora 111.7 KiB perl-Digest noarch 1.20-502.fc40 fedora 35.2 KiB perl-Digest-MD5 x86_64 2.59-3.fc40 fedora 59.7 KiB perl-DynaLoader x86_64 1.54-507.fc41 fedora 32.1 KiB perl-Encode x86_64 4:3.21-505.fc41 fedora 4.7 MiB perl-Errno x86_64 1.37-507.fc41 fedora 8.4 KiB perl-Exporter noarch 5.78-3.fc40 fedora 54.2 KiB perl-Fcntl x86_64 1.15-507.fc41 fedora 24.6 KiB perl-File-Basename noarch 2.86-507.fc41 fedora 14.0 KiB perl-File-Path noarch 2.18-503.fc40 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.100-503.fc40 fedora 162.3 KiB perl-File-stat noarch 1.13-507.fc41 fedora 12.7 KiB perl-FileHandle noarch 2.05-507.fc41 fedora 9.3 KiB perl-Getopt-Long noarch 1:2.57-4.fc41 fedora 144.1 KiB perl-Getopt-Std noarch 1.13-507.fc41 fedora 11.1 KiB perl-HTTP-Tiny noarch 0.088-5.fc40 fedora 152.1 KiB perl-IO x86_64 1.52-507.fc41 fedora 151.0 KiB perl-IO-Socket-IP noarch 0.42-2.fc40 fedora 98.6 KiB perl-IO-Socket-SSL noarch 2.085-1.fc40 fedora 685.0 KiB perl-IPC-Open3 noarch 1.22-507.fc41 fedora 22.5 KiB perl-MIME-Base64 x86_64 3.16-503.fc40 fedora 46.1 KiB perl-Mozilla-CA noarch 20240313-1.fc41 fedora 9.5 KiB perl-Net-SSLeay x86_64 1.94-3.fc40 fedora 1.3 MiB perl-POSIX x86_64 2.13-507.fc41 fedora 229.0 KiB perl-PathTools x86_64 3.89-502.fc40 fedora 179.6 KiB perl-Pod-Escapes noarch 1:1.07-503.fc40 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-503.fc40 fedora 163.1 KiB perl-Pod-Simple noarch 1:3.45-6.fc40 fedora 559.8 KiB perl-Pod-Usage noarch 4:2.03-504.fc41 fedora 84.7 KiB perl-Scalar-List-Utils x86_64 5:1.63-503.fc40 fedora 145.5 KiB perl-SelectSaver noarch 1.02-507.fc41 fedora 2.2 KiB perl-Socket x86_64 4:2.038-1.fc41 fedora 124.0 KiB perl-Storable x86_64 1:3.32-502.fc40 fedora 232.3 KiB perl-Symbol noarch 1.09-507.fc41 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-504.fc40 fedora 97.5 KiB perl-Term-Cap noarch 1.18-503.fc40 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-502.fc40 fedora 13.5 KiB perl-Text-Tabs+Wrap noarch 2024.001-1.fc41 fedora 22.5 KiB perl-Time-Local noarch 2:1.350-5.fc40 fedora 68.9 KiB perl-URI noarch 5.28-1.fc41 fedora 240.2 KiB perl-base noarch 2.27-507.fc41 fedora 12.5 KiB perl-constant noarch 1.33-503.fc40 fedora 26.2 KiB perl-if noarch 0.61.000-507.fc41 fedora 5.8 KiB perl-interpreter x86_64 4:5.38.2-507.fc41 fedora 119.8 KiB perl-libnet noarch 3.15-503.fc40 fedora 289.0 KiB perl-libs x86_64 4:5.38.2-507.fc41 fedora 9.8 MiB perl-locale noarch 1.10-507.fc41 fedora 6.2 KiB perl-mro x86_64 1.28-507.fc41 fedora 41.6 KiB perl-overload noarch 1.37-507.fc41 fedora 71.5 KiB perl-overloading noarch 0.02-507.fc41 fedora 4.8 KiB perl-parent noarch 1:0.241-502.fc40 fedora 9.7 KiB perl-podlators noarch 1:5.01-502.fc40 fedora 308.1 KiB perl-vars noarch 1.05-507.fc41 fedora 3.9 KiB pixman x86_64 0.43.4-1.fc41 fedora 710.1 KiB pixman-devel x86_64 0.43.4-1.fc41 fedora 49.4 KiB python-pip-wheel noarch 24.0-2.fc41 fedora 1.5 MiB python3 x86_64 3.12.3-2.fc41 fedora 31.5 KiB python3-libs x86_64 3.12.3-2.fc41 fedora 40.9 MiB python3-packaging noarch 24.0-1.fc41 fedora 424.8 KiB sysprof-capture-devel x86_64 46.0-1.fc41 fedora 252.8 KiB tcl x86_64 1:8.6.14-1.fc41 fedora 4.2 MiB tcl-devel x86_64 1:8.6.14-1.fc41 fedora 791.4 KiB tk x86_64 1:8.6.14-1.fc41 fedora 3.6 MiB tk-devel x86_64 1:8.6.14-1.fc41 fedora 985.0 KiB tre x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 75.9 KiB tre-common noarch 0.8.0-43.20140228gitc2f5d13.fc40 fedora 81.0 KiB tre-devel x86_64 0.8.0-43.20140228gitc2f5d13.fc40 fedora 10.7 KiB ttmkfdir x86_64 3.0.9-70.fc40 fedora 122.7 KiB tzdata noarch 2024a-8.fc41 fedora 1.7 MiB tzdata-java noarch 2024a-8.fc41 fedora 101.7 KiB xclip x86_64 0.13-21.git11cba61.fc40 fedora 62.4 KiB xdg-utils noarch 1.2.1-1.fc41 fedora 346.3 KiB xml-common noarch 0.6.3-63.fc40 fedora 78.4 KiB xorg-x11-fonts-Type1 noarch 7.5-38.fc40 fedora 863.3 KiB xorg-x11-proto-devel noarch 2024.1-2.fc41 fedora 1.7 MiB xz-devel x86_64 1:5.4.6-3.fc41 fedora 255.8 KiB zlib-ng-compat-devel x86_64 2.1.6-4.fc41 fedora 103.4 KiB Transaction Summary: Installing: 346 packages Total size of inbound packages is 410 MiB. 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libxml2-devel-0:2.12.7-1.fc41 100% | 11.1 MiB/s | 524.0 KiB | 00m00s [323/346] add-determinism-0:0.2.0-9.fc4 100% | 11.5 MiB/s | 906.5 KiB | 00m00s [324/346] expat-0:2.6.2-1.fc41.x86_64 100% | 3.7 MiB/s | 113.2 KiB | 00m00s [325/346] libb2-0:0.98.1-11.fc40.x86_64 100% | 1.5 MiB/s | 25.5 KiB | 00m00s [326/346] python3-libs-0:3.12.3-2.fc41. 100% | 61.2 MiB/s | 9.1 MiB | 00m00s [327/346] mpdecimal-0:2.5.1-9.fc40.x86_ 100% | 4.8 MiB/s | 88.6 KiB | 00m00s [328/346] python-pip-wheel-0:24.0-2.fc4 100% | 43.4 MiB/s | 1.5 MiB | 00m00s [329/346] lua-0:5.4.6-5.fc40.x86_64 100% | 11.0 MiB/s | 190.8 KiB | 00m00s [330/346] tzdata-0:2024a-8.fc41.noarch 100% | 13.4 MiB/s | 714.9 KiB | 00m00s [331/346] R-java-0:4.4.0-1.fc41~bootstr 100% | 1.2 MiB/s | 11.3 KiB | 00m00s [332/346] libXau-devel-0:1.0.11-6.fc40. 100% | 975.5 KiB/s | 13.7 KiB | 00m00s [333/346] cairo-devel-0:1.18.0-3.fc40.x 100% | 11.8 MiB/s | 192.7 KiB | 00m00s [334/346] python3-packaging-0:24.0-1.fc 100% | 6.5 MiB/s | 126.2 KiB | 00m00s 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-------------------------------------------------------------------------------- [346/346] Total 100% | 33.2 MiB/s | 409.9 MiB | 00m12s Running transaction [ 1/348] Verify package files 100% | 222.0 B/s | 346.0 B | 00m02s >>> Running pre-transaction scriptlet: crypto-policies-scripts-0:20240521-1.gitf >>> Stop pre-transaction scriptlet: crypto-policies-scripts-0:20240521-1.gitf71d >>> Running pre-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Stop pre-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Running pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.f >>> Stop pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.fc41 [ 2/348] Prepare transaction 100% | 768.0 B/s | 346.0 B | 00m00s [ 3/348] Installing zlib-ng-compat-dev 100% | 102.0 MiB/s | 104.5 KiB | 00m00s [ 4/348] Installing nspr-0:4.35.0-23.f 100% | 102.3 MiB/s | 314.2 KiB | 00m00s [ 5/348] Installing xorg-x11-proto-dev 100% | 127.3 MiB/s | 1.8 MiB | 00m00s [ 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100% | 121.1 KiB/s | 124.0 B | 00m00s [343/348] Installing R-CRAN-riskRegress 100% | 99.3 MiB/s | 2.4 MiB | 00m00s [344/348] Installing R-CRAN-GGally-0:2. 100% | 117.9 MiB/s | 2.4 MiB | 00m00s [345/348] Installing R-CRAN-RcppArmadil 100% | 133.2 MiB/s | 6.1 MiB | 00m00s [346/348] Installing annobin-plugin-gcc 100% | 41.4 MiB/s | 976.1 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:292-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:292-1.fc41.noarch [347/348] Installing gcc-plugin-annobin 100% | 2.4 MiB/s | 58.6 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:292-1.fc41.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:292-1.fc41.noarch [348/348] Installing add-determinism-0: 100% | 3.1 MiB/s | 2.6 MiB | 00m01s >>> Running post-transaction scriptlet: crypto-policies-scripts-0:20240521-1.git >>> Stop post-transaction scriptlet: crypto-policies-scripts-0:20240521-1.gitf71 >>> Running post-transaction scriptlet: nss-0:3.100.0-1.fc41.x86_64 >>> Stop post-transaction scriptlet: nss-0:3.100.0-1.fc41.x86_64 >>> Running post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Stop post-transaction scriptlet: copy-jdk-configs-0:4.1-5.fc40.noarch >>> Running post-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1. >>> Stop post-transaction scriptlet: java-21-openjdk-headless-1:21.0.3.0.9-1.fc4 >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-5.fc41.x86_64 >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-5.fc41.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-1:21.0.3.0.9-1.fc41.x86_ >>> Stop post-transaction scriptlet: java-21-openjdk-1:21.0.3.0.9-1.fc41.x86_64 >>> Running post-transaction scriptlet: java-21-openjdk-devel-1:21.0.3.0.9-1.fc4 >>> Stop post-transaction scriptlet: java-21-openjdk-devel-1:21.0.3.0.9-1.fc41.x >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-18.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-18.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.80.2-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.80.2-1.fc41.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.80.2-1.fc41.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.80.2-1.fc41.x86_64 >>> Running trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-5.fc41.x86_64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-5.fc41.x86_64 Warning: skipped PGP checks for 133 package(s). Finish: build setup for R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm Start: rpmbuild R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm Building target platforms: x86_64 Building for target x86_64 warning: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.2TwBwM + umask 022 + cd /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + test -d /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + /usr/bin/rm -rf /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.1rqQaO + umask 022 + cd /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + cd /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + rm -rf BayesSurvive + /usr/bin/mkdir -p BayesSurvive + cd BayesSurvive + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BayesSurvive_0.0.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d BayesSurvive/src ']' + find BayesSurvive/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d BayesSurvive/src ']' + find BayesSurvive/src/Makevars.in BayesSurvive/src/Makevars.win -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.jN97eo + umask 022 + cd /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BayesSurvive + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.exR1tT + umask 022 + cd /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + '[' /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + mkdir /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BayesSurvive + mkdir -p /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT/usr/local/lib/R/library BayesSurvive * installing *source* package ‘BayesSurvive’ ... ** package ‘BayesSurvive’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ -std=gnu++17 accepts -g... yes checking for g++ -std=gnu++17 option to enable C++11 features... none needed checking whether CXX supports -std=c++17... yes checking for g++ -std=gnu++17 option to support OpenMP... -fopenmp checking whether OpenMP will actually work in a package... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc (GCC) 14.1.1 20240522 (Red Hat 14.1.1-4)’ using C++ compiler: ‘g++ (GCC) 14.1.1 20240522 (Red Hat 14.1.1-4)’ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o gcc -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c settingInterval.cpp -o settingInterval.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c updateRP_genomic_cpp.cpp -o updateRP_genomic_cpp.o updateRP_genomic_cpp.cpp: In function ‘Rcpp::List updateBH_list_cpp(Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, double)’: updateRP_genomic_cpp.cpp:69:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 69 | for (unsigned int g = 0; g < S; ++g) | ~~^~~ updateRP_genomic_cpp.cpp:83:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 83 | for (unsigned int j = 0; j < J_tmp; ++j) | ~~^~~~~~~ g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o BayesSurvive.so RcppExports.o init.o settingInterval.o updateRP_genomic_cpp.o -fopenmp -lflexiblas -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT/usr/local/lib/R/library/00LOCK-BayesSurvive/00new/BayesSurvive/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘BayesSurvive’ finding HTML links ... done BayesSurvive-package html BayesSurvive html UpdateGamma html UpdateRPlee11 html VS html coef.BayesSurvive html func_MCMC html func_MCMC_graph html plot.BayesSurvive html plotBrier html predict.BayesSurvive html simData html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BayesSurvive) + test -d BayesSurvive/src + cd BayesSurvive/src + rm -f RcppExports.o init.o settingInterval.o updateRP_genomic_cpp.o BayesSurvive.so + rm -f /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT/usr/local/lib/R/library/R.css + find /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.0.2-1.fc41.copr7531047 --unique-debug-suffix -0.0.2-1.fc41.copr7531047.x86_64 --unique-debug-src-base R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BayesSurvive find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.x86_64 47 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/local/lib/R/library/BayesSurvive/doc/BayesCox.Rmd is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT Cannot initialize handler pyc: ModuleNotFoundError: No module named 'marshalparser' [src/multiprocess.rs:66:9] &cmd = Command { program: "/usr/bin/add-determinism", args: [ "/usr/bin/add-determinism", "--socket", "3", "--brp", "--handler", "ar,jar,javadoc", ], create_pidfd: false, } Bye! Bye! Reading /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/SPECPARTS/rpm-debuginfo.specpart Processing files: R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.x86_64 Provides: R-CRAN-BayesSurvive = 0.0.2-1.fc41.copr7531047 R-CRAN-BayesSurvive(x86-64) = 0.0.2-1.fc41.copr7531047 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-BayesSurvive-debugsource-0.0.2-1.fc41.copr7531047.x86_64 Provides: R-CRAN-BayesSurvive-debugsource = 0.0.2-1.fc41.copr7531047 R-CRAN-BayesSurvive-debugsource(x86-64) = 0.0.2-1.fc41.copr7531047 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-BayesSurvive-debuginfo-0.0.2-1.fc41.copr7531047.x86_64 Provides: R-CRAN-BayesSurvive-debuginfo = 0.0.2-1.fc41.copr7531047 R-CRAN-BayesSurvive-debuginfo(x86-64) = 0.0.2-1.fc41.copr7531047 debuginfo(build-id) = 4243dc77379eb9687dc26e4227d006600de4823e Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-BayesSurvive-debugsource(x86-64) = 0.0.2-1.fc41.copr7531047 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build/BUILDROOT Wrote: /builddir/build/RPMS/R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-BayesSurvive-debugsource-0.0.2-1.fc41.copr7531047.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-BayesSurvive-debuginfo-0.0.2-1.fc41.copr7531047.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.hQ71rw + umask 022 + cd /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + test -d /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + rm -rf /builddir/build/BUILD/R-CRAN-BayesSurvive-0.0.2-build + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %source_date_epoch_from_changelog is set, but %changelog has no entries to take a date from Finish: rpmbuild R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm Finish: build phase for R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1717550461.191782/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-BayesSurvive-0.0.2-1.fc41.copr7531047.src.rpm) Config(child) 1 minutes 10 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-BayesSurvive", "epoch": null, "version": "0.0.2", "release": "1.fc41.copr7531047", "arch": "x86_64" }, { "name": "R-CRAN-BayesSurvive", "epoch": null, "version": "0.0.2", "release": "1.fc41.copr7531047", "arch": "src" }, { "name": "R-CRAN-BayesSurvive-debuginfo", "epoch": null, "version": "0.0.2", "release": "1.fc41.copr7531047", "arch": "x86_64" }, { "name": "R-CRAN-BayesSurvive-debugsource", "epoch": null, "version": "0.0.2", "release": "1.fc41.copr7531047", "arch": "x86_64" } ] } RPMResults finished