%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  Rsmlx
%global packver   2024.1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          2024.1.0
Release:          1%{?dist}%{?buildtag}
Summary:          R Speaks 'Monolix'

License:          BSD_2_clause + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.0.0
Requires:         R-core >= 3.0.0
BuildArch:        noarch
BuildRequires:    R-graphics 
BuildRequires:    R-grDevices 
BuildRequires:    R-utils 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-MASS 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-gridExtra 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-tidyr 
Requires:         R-graphics 
Requires:         R-grDevices 
Requires:         R-utils 
Requires:         R-stats 
Requires:         R-CRAN-MASS 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-gridExtra 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-tidyr 

%description
Provides methods for model building and model evaluation of mixed effects
models using 'Monolix' <https://monolix.lixoft.com>. 'Monolix' is a
software tool for nonlinear mixed effects modeling that must have been
installed in order to use 'Rsmlx'. Among other tasks, 'Rsmlx' provides a
powerful tool for automatic PK model building, performs statistical tests
for model assessment, bootstrap simulation and likelihood profiling for
computing confidence intervals. 'Rsmlx' also proposes several automatic
covariate search methods for mixed effects models.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}