%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  GreyZones
%global packver   0.0.5
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.0.5
Release:          1%{?dist}%{?buildtag}
Summary:          Detection of Grey Zones in Two-Way Inter-Rater Agreement Tables

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-CRAN-irrCAC >= 1.0
Requires:         R-CRAN-irrCAC >= 1.0

%description
Grey zones locally occur in an agreement table due to the subjective
evaluation of raters based on various factors such as not having uniform
guidelines, the differences between the raters' level of expertise or low
variability among the level of the categorical variable. It is important
to detect grey zones since they cause a negative bias in the estimate of
the agreement level. This package provides a function for detecting the
existence of grey zones in two-way inter-rater agreement tables (Demirhan
and Yilmaz (2023) <doi:10.1186/s12874-022-01759-7>).

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}