Cells.liger {scCustomize} | R Documentation |
Extract Cells from LIGER Object
Description
Extract all cell barcodes from LIGER object
Usage
## S3 method for class 'liger'
Cells(x, by_dataset = FALSE, ...)
Arguments
x |
LIGER object name. |
by_dataset |
logical, whether to return list with vector of cell barcodes for each dataset in LIGER object or to return single vector of cell barcodes across all datasets in object (default is FALSE; return vector of cells). |
... |
Arguments passed to other methods |
Value
vector or list depending on by_dataset
parameter
Examples
## Not run:
# return single vector of all cells
all_features <- Cells(x = object, by_dataset = FALSE)
# return list of vectors containing cells from each individual dataset in object
dataset_features <- Cells(x = object, by_dataset = TRUE)
## End(Not run)
[Package scCustomize version 3.0.0 Index]