%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  admiralneuro
%global packver   0.1.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.0
Release:          1%{?dist}%{?buildtag}
Summary:          Neuroscience Extension Package for ADaM in 'R' Asset Library

License:          Apache License (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1
Requires:         R-core >= 4.1
BuildArch:        noarch
BuildRequires:    R-CRAN-cli >= 3.6.2
BuildRequires:    R-CRAN-tibble >= 3.2.1
BuildRequires:    R-CRAN-lubridate >= 1.7.4
BuildRequires:    R-CRAN-magrittr >= 1.5
BuildRequires:    R-CRAN-stringr >= 1.4.0
BuildRequires:    R-CRAN-admiral >= 1.2.0
BuildRequires:    R-CRAN-admiraldev >= 1.2.0
BuildRequires:    R-CRAN-tidyselect >= 1.1.0
BuildRequires:    R-CRAN-dplyr >= 1.0.5
BuildRequires:    R-CRAN-tidyr >= 1.0.2
BuildRequires:    R-CRAN-hms >= 0.5.3
BuildRequires:    R-CRAN-rlang >= 0.4.4
BuildRequires:    R-CRAN-purrr >= 0.3.3
BuildRequires:    R-CRAN-lifecycle >= 0.1.0
Requires:         R-CRAN-cli >= 3.6.2
Requires:         R-CRAN-tibble >= 3.2.1
Requires:         R-CRAN-lubridate >= 1.7.4
Requires:         R-CRAN-magrittr >= 1.5
Requires:         R-CRAN-stringr >= 1.4.0
Requires:         R-CRAN-admiral >= 1.2.0
Requires:         R-CRAN-admiraldev >= 1.2.0
Requires:         R-CRAN-tidyselect >= 1.1.0
Requires:         R-CRAN-dplyr >= 1.0.5
Requires:         R-CRAN-tidyr >= 1.0.2
Requires:         R-CRAN-hms >= 0.5.3
Requires:         R-CRAN-rlang >= 0.4.4
Requires:         R-CRAN-purrr >= 0.3.3
Requires:         R-CRAN-lifecycle >= 0.1.0

%description
Programming neuroscience Clinical Data Standards Interchange Consortium
(CDISC) compliant Analysis Data Model (ADaM) datasets. ADaM datasets are a
mandatory part of any New Drug or Biologics License Application submitted
to the United States Food and Drug Administration (FDA). Analysis
derivations are implemented in accordance with the "Analysis Data Model
Implementation Guide" (CDISC Analysis Data Model Team, 2021,
<https://www.cdisc.org/standards/foundational/adam>). This package extends
the 'admiral' package.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}