%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname OhdsiShinyAppBuilder
%global packver 1.0.0
%global rlibdir /usr/local/lib/R/library
Name: R-CRAN-%{packname}
Version: 1.0.0
Release: 1%{?dist}%{?buildtag}
Summary: Viewing Observational Health Data Sciences and Informatics Results via 'shiny' Modules
License: Apache License 2.0
URL: https://cran.r-project.org/package=%{packname}
Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
BuildRequires: R-devel >= 3.3.0
Requires: R-core >= 3.3.0
BuildArch: noarch
BuildRequires: R-CRAN-ParallelLogger >= 2.0.0
BuildRequires: R-CRAN-ResultModelManager >= 0.4.0
BuildRequires: R-CRAN-checkmate
BuildRequires: R-CRAN-DatabaseConnector
BuildRequires: R-CRAN-devtools
BuildRequires: R-CRAN-dplyr
BuildRequires: R-CRAN-rlang
BuildRequires: R-CRAN-shiny
BuildRequires: R-CRAN-shinydashboard
BuildRequires: R-utils
Requires: R-CRAN-ParallelLogger >= 2.0.0
Requires: R-CRAN-ResultModelManager >= 0.4.0
Requires: R-CRAN-checkmate
Requires: R-CRAN-DatabaseConnector
Requires: R-CRAN-devtools
Requires: R-CRAN-dplyr
Requires: R-CRAN-rlang
Requires: R-CRAN-shiny
Requires: R-CRAN-shinydashboard
Requires: R-utils
%description
Users can build a single 'shiny' app for exploring population
characterization, population-level causal effect estimation, and
patient-level prediction results generated via the R analyses packages in
'HADES' (see ). Learn more about
'OhdsiShinyAppBuilder' at .
%prep
%setup -q -c -n %{packname}
# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;
%build
%install
mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;
%files
%{rlibdir}/%{packname}