%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  holiglm
%global packver   1.0.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.1
Release:          1%{?dist}%{?buildtag}
Summary:          Holistic Generalized Linear Models

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-CRAN-ROI >= 0.3.0
BuildRequires:    R-CRAN-ROI.plugin.ecos 
BuildRequires:    R-CRAN-slam 
BuildRequires:    R-CRAN-checkmate 
BuildRequires:    R-CRAN-MASS 
BuildRequires:    R-CRAN-SuppDists 
Requires:         R-CRAN-ROI >= 0.3.0
Requires:         R-CRAN-ROI.plugin.ecos 
Requires:         R-CRAN-slam 
Requires:         R-CRAN-checkmate 
Requires:         R-CRAN-MASS 
Requires:         R-CRAN-SuppDists 

%description
Holistic generalized linear models (HGLMs) extend generalized linear
models (GLMs) by enabling the possibility to add further constraints to
the model. The 'holiglm' package simplifies estimating HGLMs using convex
optimization. Additional information about the package can be found in the
reference manual, the 'README' and the accompanying paper
<doi:10.18637/jss.v108.i07>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}