%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  rwetools
%global packver   0.1.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.2
Release:          1%{?dist}%{?buildtag}
Summary:          Estimating Propensity Scores (PS), PS-Based Weights, and Effects

License:          MIT + file LICENSE
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-stats 
BuildRequires:    R-utils 
BuildRequires:    R-parallel 
BuildRequires:    R-CRAN-survival 
BuildRequires:    R-CRAN-survey 
Requires:         R-stats 
Requires:         R-utils 
Requires:         R-parallel 
Requires:         R-CRAN-survival 
Requires:         R-CRAN-survey 

%description
Toolbox that provides a streamlined, end-to-end workflow for propensity
score analysis in generating real-world evidence from real-world data. The
package covers the full analytic pipeline - from estimating propensity
scores via logistic regression, to calculating weights or creating a
matched cohort, to generating publication-ready Table 1s with standardized
mean differences and weighted balance diagnostics. It also estimates
incidence rates, hazard ratios, risk ratios, and risk differences with
support for stratified and direct-standardized analyses. All core
functions produce formatted 'Excel' reports with embedded 'README'
documentation, making results immediately shareable with collaborators and
stakeholders. Methods are based on Rosenbaum and Rubin (1983)
<doi:10.1093/biomet/70.1.41>, Austin (2011)
<doi:10.1080/00273171.2011.568786>, and Desai et al. (2017)
<doi:10.1097/EDE.0000000000000595>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}