%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  devianLM
%global packver   1.1.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.1.1
Release:          1%{?dist}%{?buildtag}
Summary:          Detecting Extremal Values in a Normal Linear Model

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildRequires:    R-CRAN-Rcpp 
BuildRequires:    R-CRAN-RcppArmadillo 
Requires:         R-CRAN-Rcpp 

%description
Provides a method to detect values poorly explained by a Gaussian linear
model. The procedure is based on the maximum of the absolute value of the
studentized residuals, which is a parameter-free statistic. This approach
generalizes several procedures used to detect abnormal values during
longitudinal monitoring of biological markers. Methodological details are
provided in Berthelot G., Saulière G., and Dedecker J. (2025), "DEViaN-LM
An R Package for Detecting Abnormal Values in the Gaussian Linear Model",
HAL Id: hal-05230549, <https://hal.science/hal-05230549>, and in Berthelot
G., Gelein B., Meinadier E., Orhant E., and Dedecker J. (2026), "A guide
to z-score-based methods, with illustrations from biological data sets",
The Journal of Sport and Exercise Science 10, 54–70,
<doi:10.36905/jses.2026.01.06>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}