Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c158' (ED25519) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 5184095 --chroot fedora-rawhide-x86_64 --detached Version: 0.62 PID: 6307 Logging PID: 6308 Task: {'appstream': False, 'background': True, 'build_id': 5184095, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'e840ea4f0b82d513b7d494bb50a9528f50cd83de', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/jakub/gcc-13-test.checker/ProDy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ProDy', 'package_version': '2.3.1-1', 'project_dirname': 'gcc-13-test.checker', 'project_name': 'gcc-13-test.checker', 'project_owner': 'jakub', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/jakub/gcc-13-test.checker/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}, {'baseurl': 'https://jakub.fedorapeople.org/fedora-gcc13-$arch/', 'id': 'https_jakub_fedorapeople_org_fedora_gcc13_arch', 'name': 'Additional repo https_jakub_fedorapeople_org_fedora_gcc13_arch'}], 'sandbox': 'jakub/gcc-13-test.checker--jakub', 'source_json': {}, 'source_type': None, 'submitter': 'jakub', 'tags': [], 'task_id': '5184095-fedora-rawhide-x86_64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/jakub/gcc-13-test.checker/ProDy /var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/jakub/gcc-13-test.checker/ProDy', '/var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy'... Running: git checkout e840ea4f0b82d513b7d494bb50a9528f50cd83de cmd: ['git', 'checkout', 'e840ea4f0b82d513b7d494bb50a9528f50cd83de'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy rc: 0 stdout: stderr: Note: switching to 'e840ea4f0b82d513b7d494bb50a9528f50cd83de'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at e840ea4 automatic import of ProDy Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading ProDy-2.3.1.tar.gz INFO: Calling: curl -H Pragma: -o ProDy-2.3.1.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jakub/gcc-13-test.checker/ProDy/ProDy-2.3.1.tar.gz/md5/f111561854e7b20a6b3170b346efa045/ProDy-2.3.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated 100 20.1M 100 20.1M 0 0 68.1M 0 --:--:-- --:--:-- --:--:-- 68.2M INFO: Reading stdout from command: md5sum ProDy-2.3.1.tar.gz Running (timeout=115200): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1672220725.289605 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy/ProDy.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1672220725.289605/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 705 kB/s | 110 kB 00:00 Additional repo https_jakub_fedorapeople_org_fe 361 kB/s | 92 kB 00:00 fedora 36 MB/s | 65 MB 00:01 Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: dnf noarch 4.14.0-1.fc38 fedora 480 k dnf-plugins-core noarch 4.3.1-1.fc38 fedora 34 k Installing dependencies: alternatives x86_64 1.21-1.fc38 fedora 38 k audit-libs x86_64 3.0.9-2.fc38 fedora 116 k basesystem noarch 11-14.fc37 fedora 7.0 k bash x86_64 5.2.9-3.fc38 fedora 1.8 M bzip2-libs x86_64 1.0.8-12.fc37 fedora 41 k ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k coreutils x86_64 9.1-8.fc38 fedora 1.1 M coreutils-common x86_64 9.1-8.fc38 fedora 2.0 M crypto-policies noarch 20221215-1.gita4c31a3.fc38 fedora 90 k curl x86_64 7.87.0-1.fc38 fedora 344 k cyrus-sasl-lib x86_64 2.1.28-8.fc38 fedora 792 k dbus-libs x86_64 1:1.14.4-1.fc38 fedora 156 k dnf-data noarch 4.14.0-1.fc38 fedora 43 k elfutils-default-yama-scope noarch 0.188-3.fc38 fedora 15 k elfutils-libelf x86_64 0.188-3.fc38 fedora 196 k elfutils-libs x86_64 0.188-3.fc38 fedora 257 k expat x86_64 2.5.0-1.fc38 fedora 110 k fedora-gpg-keys noarch 38-0.3 fedora 125 k fedora-release noarch 38-0.6 fedora 11 k fedora-release-common noarch 38-0.6 fedora 21 k fedora-release-identity-basic noarch 38-0.6 fedora 11 k fedora-repos noarch 38-0.3 fedora 10 k fedora-repos-rawhide noarch 38-0.3 fedora 9.7 k file-libs x86_64 5.42-4.fc37 fedora 676 k filesystem x86_64 3.18-2.fc37 fedora 1.1 M findutils x86_64 1:4.9.0-2.fc37 fedora 492 k gawk x86_64 5.1.1-4.fc37 fedora 1.0 M gdbm-libs x86_64 1:1.23-2.fc37 fedora 56 k glib2 x86_64 2.74.1-2.fc38 fedora 2.7 M glibc x86_64 2.36.9000-19.fc38 fedora 2.1 M glibc-common x86_64 2.36.9000-19.fc38 fedora 309 k glibc-minimal-langpack x86_64 2.36.9000-19.fc38 fedora 30 k gmp x86_64 1:6.2.1-3.fc37 fedora 315 k gnupg2 x86_64 2.3.8-1.fc38 fedora 2.6 M gnutls x86_64 3.7.8-9.fc38 fedora 1.1 M gpgme x86_64 1.17.1-3.fc38 fedora 210 k grep x86_64 3.8-1.fc38 fedora 292 k ima-evm-utils x86_64 1.4-6.fc37 fedora 63 k json-c x86_64 0.16-3.fc38 fedora 41 k keyutils-libs x86_64 1.6.1-5.fc37 fedora 31 k krb5-libs x86_64 1.20.1-3.fc38 fedora 723 k libacl x86_64 2.3.1-4.fc37 fedora 23 k libarchive x86_64 3.6.1-3.fc38 fedora 397 k libassuan x86_64 2.5.5-5.fc37 fedora 67 k libattr x86_64 2.5.1-5.fc37 fedora 18 k libb2 x86_64 0.98.1-7.fc37 fedora 25 k libblkid x86_64 2.38.1-3.fc38 fedora 106 k libbrotli x86_64 1.0.9-9.fc37 fedora 315 k libcap x86_64 2.48-5.fc37 fedora 67 k libcap-ng x86_64 0.8.3-4.fc38 fedora 32 k libcom_err x86_64 1.46.5-3.fc37 fedora 25 k libcomps x86_64 0.1.18-4.fc37 fedora 76 k libcurl x86_64 7.87.0-1.fc38 fedora 301 k libdnf x86_64 0.68.0-1.fc38 fedora 673 k libevent x86_64 2.1.12-7.fc37 fedora 261 k libffi x86_64 3.4.4-1.fc38 fedora 38 k libfsverity x86_64 1.4-8.fc37 fedora 19 k libgcc x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 93 k libgcrypt x86_64 1.10.1-6.fc38 fedora 511 k libgomp x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 300 k libgpg-error x86_64 1.46-1.fc38 fedora 227 k libidn2 x86_64 2.3.4-1.fc38 fedora 160 k libksba x86_64 1.6.3-1.fc38 fedora 158 k libmodulemd x86_64 2.14.0-4.fc37 fedora 234 k libmount x86_64 2.38.1-3.fc38 fedora 135 k libnghttp2 x86_64 1.51.0-1.fc38 fedora 75 k libnsl2 x86_64 2.0.0-4.fc37 fedora 30 k libpsl x86_64 0.21.1-6.fc37 fedora 63 k librepo x86_64 1.15.1-1.fc38 fedora 96 k libreport-filesystem noarch 2.17.6-1.fc38 fedora 14 k libselinux x86_64 3.4-6.fc38 fedora 86 k libsemanage x86_64 3.4-6.fc38 fedora 120 k libsepol x86_64 3.4-4.fc38 fedora 322 k libsigsegv x86_64 2.14-3.fc37 fedora 27 k libsmartcols x86_64 2.38.1-3.fc38 fedora 64 k libsolv x86_64 0.7.22-3.fc37 fedora 405 k libssh x86_64 0.10.4-2.fc38 fedora 209 k libssh-config noarch 0.10.4-2.fc38 fedora 8.8 k libstdc++ x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 799 k libtasn1 x86_64 4.19.0-1.fc38 fedora 75 k libtirpc x86_64 1.3.3-0.fc37 fedora 93 k libunistring x86_64 1.0-2.fc37 fedora 549 k libuuid x86_64 2.38.1-3.fc38 fedora 27 k libverto x86_64 0.3.2-4.fc37 fedora 21 k libxcrypt x86_64 4.4.33-5.fc38 fedora 120 k libxml2 x86_64 2.10.3-2.fc38 fedora 705 k libyaml x86_64 0.2.5-8.fc37 fedora 60 k libzstd x86_64 1.5.2-3.fc37 fedora 294 k lua-libs x86_64 5.4.4-6.fc38 fedora 131 k lz4-libs x86_64 1.9.3-5.fc37 fedora 70 k mpdecimal x86_64 2.5.1-4.fc37 fedora 102 k mpfr x86_64 4.1.1-2.fc38 fedora 598 k ncurses-base noarch 6.3-5.20221126.fc38 fedora 86 k ncurses-libs x86_64 6.3-5.20221126.fc38 fedora 329 k nettle x86_64 3.8-2.fc37 fedora 414 k npth x86_64 1.6-10.fc38 fedora 24 k openldap x86_64 2.6.3-1.fc38 fedora 254 k openssl-libs x86_64 1:3.0.5-6.fc38 fedora 2.1 M p11-kit x86_64 0.24.1-5.fc38 fedora 376 k p11-kit-trust x86_64 0.24.1-5.fc38 fedora 137 k pcre2 x86_64 10.40-1.fc37.1 fedora 236 k pcre2-syntax noarch 10.40-1.fc37.1 fedora 142 k popt x86_64 1.19-1.fc38 fedora 66 k publicsuffix-list-dafsa noarch 20221208-1.fc38 fedora 59 k python-pip-wheel noarch 22.3.1-1.fc38 fedora 1.4 M python-setuptools-wheel noarch 65.5.1-1.fc38 fedora 715 k python3 x86_64 3.11.1-1.fc38 fedora 27 k python3-dateutil noarch 1:2.8.2-4.fc37 fedora 361 k python3-dbus x86_64 1.3.2-1.fc38 fedora 157 k python3-distro noarch 1.8.0-1.fc38 fedora 49 k python3-dnf noarch 4.14.0-1.fc38 fedora 607 k python3-dnf-plugins-core noarch 4.3.1-1.fc38 fedora 277 k python3-gpg x86_64 1.17.1-3.fc38 fedora 296 k python3-hawkey x86_64 0.68.0-1.fc38 fedora 108 k python3-libcomps x86_64 0.1.18-4.fc37 fedora 48 k python3-libdnf x86_64 0.68.0-1.fc38 fedora 818 k python3-libs x86_64 3.11.1-1.fc38 fedora 9.6 M python3-rpm x86_64 4.18.0-8.fc38 fedora 94 k python3-six noarch 1.16.0-8.fc37 fedora 42 k readline x86_64 8.2-2.fc38 fedora 211 k rpm x86_64 4.18.0-8.fc38 fedora 572 k rpm-build-libs x86_64 4.18.0-8.fc38 fedora 94 k rpm-libs x86_64 4.18.0-8.fc38 fedora 309 k rpm-sequoia x86_64 1.2.0-1.fc38 fedora 829 k rpm-sign-libs x86_64 4.18.0-8.fc38 fedora 27 k sed x86_64 4.8-11.fc37 fedora 306 k setup noarch 2.14.3-1.fc38 fedora 152 k shadow-utils x86_64 2:4.13-3.fc38 fedora 1.3 M sqlite-libs x86_64 3.40.0-1.fc38 fedora 661 k systemd-libs x86_64 252.4-598.fc38 fedora 632 k tpm2-tss x86_64 4.0.0-0.1.rc2.fc38 fedora 710 k tzdata noarch 2022g-1.fc38 fedora 716 k xz-libs x86_64 5.2.9-1.fc38 fedora 93 k zchunk-libs x86_64 1.2.3-1.fc38 fedora 51 k zlib x86_64 1.2.13-1.fc38 fedora 94 k Transaction Summary ========================================================================================================================= Install 137 Packages Total download size: 57 M Installed size: 200 M Downloading Packages: (1/137): libgcc-13.0.0-0.4.fc38.x86_64.rpm 178 kB/s | 93 kB 00:00 (2/137): libgomp-13.0.0-0.4.fc38.x86_64.rpm 562 kB/s | 300 kB 00:00 (3/137): libstdc++-13.0.0-0.4.fc38.x86_64.rpm 1.4 MB/s | 799 kB 00:00 (4/137): alternatives-1.21-1.fc38.x86_64.rpm 760 kB/s | 38 kB 00:00 (5/137): basesystem-11-14.fc37.noarch.rpm 239 kB/s | 7.0 kB 00:00 (6/137): audit-libs-3.0.9-2.fc38.x86_64.rpm 1.5 MB/s | 116 kB 00:00 (7/137): bzip2-libs-1.0.8-12.fc37.x86_64.rpm 1.2 MB/s | 41 kB 00:00 (8/137): ca-certificates-2022.2.54-5.fc37.noarc 13 MB/s | 829 kB 00:00 (9/137): coreutils-9.1-8.fc38.x86_64.rpm 13 MB/s | 1.1 MB 00:00 (10/137): coreutils-common-9.1-8.fc38.x86_64.rp 46 MB/s | 2.0 MB 00:00 (11/137): crypto-policies-20221215-1.gita4c31a3 5.8 MB/s | 90 kB 00:00 (12/137): curl-7.87.0-1.fc38.x86_64.rpm 19 MB/s | 344 kB 00:00 (13/137): cyrus-sasl-lib-2.1.28-8.fc38.x86_64.r 29 MB/s | 792 kB 00:00 (14/137): dbus-libs-1.14.4-1.fc38.x86_64.rpm 9.3 MB/s | 156 kB 00:00 (15/137): bash-5.2.9-3.fc38.x86_64.rpm 9.8 MB/s | 1.8 MB 00:00 (16/137): dnf-data-4.14.0-1.fc38.noarch.rpm 2.8 MB/s | 43 kB 00:00 (17/137): dnf-4.14.0-1.fc38.noarch.rpm 24 MB/s | 480 kB 00:00 (18/137): dnf-plugins-core-4.3.1-1.fc38.noarch. 1.0 MB/s | 34 kB 00:00 (19/137): elfutils-default-yama-scope-0.188-3.f 596 kB/s | 15 kB 00:00 (20/137): elfutils-libelf-0.188-3.fc38.x86_64.r 7.1 MB/s | 196 kB 00:00 (21/137): expat-2.5.0-1.fc38.x86_64.rpm 6.7 MB/s | 110 kB 00:00 (22/137): elfutils-libs-0.188-3.fc38.x86_64.rpm 12 MB/s | 257 kB 00:00 (23/137): fedora-gpg-keys-38-0.3.noarch.rpm 7.6 MB/s | 125 kB 00:00 (24/137): fedora-release-38-0.6.noarch.rpm 752 kB/s | 11 kB 00:00 (25/137): fedora-release-identity-basic-38-0.6. 793 kB/s | 11 kB 00:00 (26/137): fedora-repos-38-0.3.noarch.rpm 703 kB/s | 10 kB 00:00 (27/137): fedora-repos-rawhide-38-0.3.noarch.rp 679 kB/s | 9.7 kB 00:00 (28/137): fedora-release-common-38-0.6.noarch.r 452 kB/s | 21 kB 00:00 (29/137): file-libs-5.42-4.fc37.x86_64.rpm 29 MB/s | 676 kB 00:00 (30/137): filesystem-3.18-2.fc37.x86_64.rpm 37 MB/s | 1.1 MB 00:00 (31/137): findutils-4.9.0-2.fc37.x86_64.rpm 17 MB/s | 492 kB 00:00 (32/137): gawk-5.1.1-4.fc37.x86_64.rpm 35 MB/s | 1.0 MB 00:00 (33/137): gdbm-libs-1.23-2.fc37.x86_64.rpm 2.6 MB/s | 56 kB 00:00 (34/137): glibc-2.36.9000-19.fc38.x86_64.rpm 32 MB/s | 2.1 MB 00:00 (35/137): glib2-2.74.1-2.fc38.x86_64.rpm 38 MB/s | 2.7 MB 00:00 (36/137): glibc-common-2.36.9000-19.fc38.x86_64 4.3 MB/s | 309 kB 00:00 (37/137): glibc-minimal-langpack-2.36.9000-19.f 2.0 MB/s | 30 kB 00:00 (38/137): gmp-6.2.1-3.fc37.x86_64.rpm 11 MB/s | 315 kB 00:00 (39/137): gpgme-1.17.1-3.fc38.x86_64.rpm 6.2 MB/s | 210 kB 00:00 (40/137): gnupg2-2.3.8-1.fc38.x86_64.rpm 40 MB/s | 2.6 MB 00:00 (41/137): gnutls-3.7.8-9.fc38.x86_64.rpm 19 MB/s | 1.1 MB 00:00 (42/137): grep-3.8-1.fc38.x86_64.rpm 17 MB/s | 292 kB 00:00 (43/137): ima-evm-utils-1.4-6.fc37.x86_64.rpm 4.2 MB/s | 63 kB 00:00 (44/137): json-c-0.16-3.fc38.x86_64.rpm 2.8 MB/s | 41 kB 00:00 (45/137): libacl-2.3.1-4.fc37.x86_64.rpm 1.3 MB/s | 23 kB 00:00 (46/137): krb5-libs-1.20.1-3.fc38.x86_64.rpm 32 MB/s | 723 kB 00:00 (47/137): keyutils-libs-1.6.1-5.fc37.x86_64.rpm 1.0 MB/s | 31 kB 00:00 (48/137): libassuan-2.5.5-5.fc37.x86_64.rpm 4.5 MB/s | 67 kB 00:00 (49/137): libarchive-3.6.1-3.fc38.x86_64.rpm 17 MB/s | 397 kB 00:00 (50/137): libb2-0.98.1-7.fc37.x86_64.rpm 1.7 MB/s | 25 kB 00:00 (51/137): libblkid-2.38.1-3.fc38.x86_64.rpm 6.4 MB/s | 106 kB 00:00 (52/137): libattr-2.5.1-5.fc37.x86_64.rpm 497 kB/s | 18 kB 00:00 (53/137): libbrotli-1.0.9-9.fc37.x86_64.rpm 17 MB/s | 315 kB 00:00 (54/137): libcom_err-1.46.5-3.fc37.x86_64.rpm 1.7 MB/s | 25 kB 00:00 (55/137): libcap-2.48-5.fc37.x86_64.rpm 2.6 MB/s | 67 kB 00:00 (56/137): libcomps-0.1.18-4.fc37.x86_64.rpm 1.7 MB/s | 76 kB 00:00 (57/137): libcurl-7.87.0-1.fc38.x86_64.rpm 6.2 MB/s | 301 kB 00:00 (58/137): libevent-2.1.12-7.fc37.x86_64.rpm 15 MB/s | 261 kB 00:00 (59/137): libcap-ng-0.8.3-4.fc38.x86_64.rpm 362 kB/s | 32 kB 00:00 (60/137): libdnf-0.68.0-1.fc38.x86_64.rpm 22 MB/s | 673 kB 00:00 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publicsuffix-list-dafsa-20221208-1.f 3.9 MB/s | 59 kB 00:00 (106/137): popt-1.19-1.fc38.x86_64.rpm 2.5 MB/s | 66 kB 00:00 (107/137): python-setuptools-wheel-65.5.1-1.fc3 31 MB/s | 715 kB 00:00 (108/137): python3-3.11.1-1.fc38.x86_64.rpm 1.7 MB/s | 27 kB 00:00 (109/137): python-pip-wheel-22.3.1-1.fc38.noarc 28 MB/s | 1.4 MB 00:00 (110/137): python3-dbus-1.3.2-1.fc38.x86_64.rpm 9.7 MB/s | 157 kB 00:00 (111/137): python3-distro-1.8.0-1.fc38.noarch.r 3.3 MB/s | 49 kB 00:00 (112/137): python3-dnf-4.14.0-1.fc38.noarch.rpm 29 MB/s | 607 kB 00:00 (113/137): python3-dnf-plugins-core-4.3.1-1.fc3 14 MB/s | 277 kB 00:00 (114/137): python3-gpg-1.17.1-3.fc38.x86_64.rpm 17 MB/s | 296 kB 00:00 (115/137): python3-hawkey-0.68.0-1.fc38.x86_64. 6.6 MB/s | 108 kB 00:00 (116/137): python3-libcomps-0.1.18-4.fc37.x86_6 3.2 MB/s | 48 kB 00:00 (117/137): python3-libdnf-0.68.0-1.fc38.x86_64. 11 MB/s | 818 kB 00:00 (118/137): python3-dateutil-2.8.2-4.fc37.noarch 1.7 MB/s | 361 kB 00:00 (119/137): 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| 716 kB 00:00 (134/137): zchunk-libs-1.2.3-1.fc38.x86_64.rpm 3.4 MB/s | 51 kB 00:00 (135/137): sqlite-libs-3.40.0-1.fc38.x86_64.rpm 4.7 MB/s | 661 kB 00:00 (136/137): zlib-1.2.13-1.fc38.x86_64.rpm 5.6 MB/s | 94 kB 00:00 (137/137): xz-libs-5.2.9-1.fc38.x86_64.rpm 1.5 MB/s | 93 kB 00:00 -------------------------------------------------------------------------------- Total 26 MB/s | 57 MB 00:02 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-2.fc37.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.0.0-0.4.fc38.x86_64 1/137 Running scriptlet: libgcc-13.0.0-0.4.fc38.x86_64 1/137 Installing : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 2/137 Running scriptlet: crypto-policies-20221215-1.gita4c31a3.fc38.noarc 2/137 Installing : tzdata-2022g-1.fc38.noarch 3/137 Installing : fedora-release-identity-basic-38-0.6.noarch 4/137 Installing : python-setuptools-wheel-65.5.1-1.fc38.noarch 5/137 Installing : publicsuffix-list-dafsa-20221208-1.fc38.noarch 6/137 Installing : pcre2-syntax-10.40-1.fc37.1.noarch 7/137 Installing : ncurses-base-6.3-5.20221126.fc38.noarch 8/137 Installing : libssh-config-0.10.4-2.fc38.noarch 9/137 Installing : libreport-filesystem-2.17.6-1.fc38.noarch 10/137 Installing : dnf-data-4.14.0-1.fc38.noarch 11/137 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : fedora-gpg-keys-38-0.3.noarch 12/137 Installing : 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120/137 Installing : gnupg2-2.3.8-1.fc38.x86_64 121/137 Installing : gpgme-1.17.1-3.fc38.x86_64 122/137 Installing : librepo-1.15.1-1.fc38.x86_64 123/137 Installing : libdnf-0.68.0-1.fc38.x86_64 124/137 Installing : python3-libdnf-0.68.0-1.fc38.x86_64 125/137 Installing : python3-hawkey-0.68.0-1.fc38.x86_64 126/137 Installing : python3-gpg-1.17.1-3.fc38.x86_64 127/137 Installing : curl-7.87.0-1.fc38.x86_64 128/137 Running scriptlet: tpm2-tss-4.0.0-0.1.rc2.fc38.x86_64 129/137 useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Installing : tpm2-tss-4.0.0-0.1.rc2.fc38.x86_64 129/137 Installing : ima-evm-utils-1.4-6.fc37.x86_64 130/137 Installing : rpm-sign-libs-4.18.0-8.fc38.x86_64 131/137 Installing : python3-rpm-4.18.0-8.fc38.x86_64 132/137 Installing : python3-dnf-4.14.0-1.fc38.noarch 133/137 Installing : python3-dnf-plugins-core-4.3.1-1.fc38.noarch 134/137 Installing : dnf-plugins-core-4.3.1-1.fc38.noarch 135/137 Installing : dnf-4.14.0-1.fc38.noarch 136/137 Running scriptlet: dnf-4.14.0-1.fc38.noarch 136/137 Running scriptlet: rpm-4.18.0-8.fc38.x86_64 137/137 Installing : rpm-4.18.0-8.fc38.x86_64 137/137 Running scriptlet: filesystem-3.18-2.fc37.x86_64 137/137 Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 137/137 Running scriptlet: rpm-4.18.0-8.fc38.x86_64 137/137 Verifying : libgcc-13.0.0-0.4.fc38.x86_64 1/137 Verifying : libgomp-13.0.0-0.4.fc38.x86_64 2/137 Verifying : libstdc++-13.0.0-0.4.fc38.x86_64 3/137 Verifying : alternatives-1.21-1.fc38.x86_64 4/137 Verifying : audit-libs-3.0.9-2.fc38.x86_64 5/137 Verifying : basesystem-11-14.fc37.noarch 6/137 Verifying : bash-5.2.9-3.fc38.x86_64 7/137 Verifying : bzip2-libs-1.0.8-12.fc37.x86_64 8/137 Verifying : ca-certificates-2022.2.54-5.fc37.noarch 9/137 Verifying : coreutils-9.1-8.fc38.x86_64 10/137 Verifying : coreutils-common-9.1-8.fc38.x86_64 11/137 Verifying : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 12/137 Verifying : curl-7.87.0-1.fc38.x86_64 13/137 Verifying : cyrus-sasl-lib-2.1.28-8.fc38.x86_64 14/137 Verifying : dbus-libs-1:1.14.4-1.fc38.x86_64 15/137 Verifying : dnf-4.14.0-1.fc38.noarch 16/137 Verifying : dnf-data-4.14.0-1.fc38.noarch 17/137 Verifying : dnf-plugins-core-4.3.1-1.fc38.noarch 18/137 Verifying : elfutils-default-yama-scope-0.188-3.fc38.noarch 19/137 Verifying : elfutils-libelf-0.188-3.fc38.x86_64 20/137 Verifying : elfutils-libs-0.188-3.fc38.x86_64 21/137 Verifying : expat-2.5.0-1.fc38.x86_64 22/137 Verifying : fedora-gpg-keys-38-0.3.noarch 23/137 Verifying : fedora-release-38-0.6.noarch 24/137 Verifying : fedora-release-common-38-0.6.noarch 25/137 Verifying : fedora-release-identity-basic-38-0.6.noarch 26/137 Verifying : fedora-repos-38-0.3.noarch 27/137 Verifying : fedora-repos-rawhide-38-0.3.noarch 28/137 Verifying : file-libs-5.42-4.fc37.x86_64 29/137 Verifying : filesystem-3.18-2.fc37.x86_64 30/137 Verifying : findutils-1:4.9.0-2.fc37.x86_64 31/137 Verifying : gawk-5.1.1-4.fc37.x86_64 32/137 Verifying : gdbm-libs-1:1.23-2.fc37.x86_64 33/137 Verifying : glib2-2.74.1-2.fc38.x86_64 34/137 Verifying : glibc-2.36.9000-19.fc38.x86_64 35/137 Verifying : glibc-common-2.36.9000-19.fc38.x86_64 36/137 Verifying : glibc-minimal-langpack-2.36.9000-19.fc38.x86_64 37/137 Verifying : gmp-1:6.2.1-3.fc37.x86_64 38/137 Verifying : gnupg2-2.3.8-1.fc38.x86_64 39/137 Verifying : gnutls-3.7.8-9.fc38.x86_64 40/137 Verifying : gpgme-1.17.1-3.fc38.x86_64 41/137 Verifying : grep-3.8-1.fc38.x86_64 42/137 Verifying : ima-evm-utils-1.4-6.fc37.x86_64 43/137 Verifying : json-c-0.16-3.fc38.x86_64 44/137 Verifying : keyutils-libs-1.6.1-5.fc37.x86_64 45/137 Verifying : krb5-libs-1.20.1-3.fc38.x86_64 46/137 Verifying : libacl-2.3.1-4.fc37.x86_64 47/137 Verifying : libarchive-3.6.1-3.fc38.x86_64 48/137 Verifying : libassuan-2.5.5-5.fc37.x86_64 49/137 Verifying : libattr-2.5.1-5.fc37.x86_64 50/137 Verifying : libb2-0.98.1-7.fc37.x86_64 51/137 Verifying : libblkid-2.38.1-3.fc38.x86_64 52/137 Verifying : libbrotli-1.0.9-9.fc37.x86_64 53/137 Verifying : libcap-2.48-5.fc37.x86_64 54/137 Verifying : libcap-ng-0.8.3-4.fc38.x86_64 55/137 Verifying : libcom_err-1.46.5-3.fc37.x86_64 56/137 Verifying : libcomps-0.1.18-4.fc37.x86_64 57/137 Verifying : libcurl-7.87.0-1.fc38.x86_64 58/137 Verifying : libdnf-0.68.0-1.fc38.x86_64 59/137 Verifying : libevent-2.1.12-7.fc37.x86_64 60/137 Verifying : libffi-3.4.4-1.fc38.x86_64 61/137 Verifying : libfsverity-1.4-8.fc37.x86_64 62/137 Verifying : libgcrypt-1.10.1-6.fc38.x86_64 63/137 Verifying : libgpg-error-1.46-1.fc38.x86_64 64/137 Verifying : libidn2-2.3.4-1.fc38.x86_64 65/137 Verifying : libksba-1.6.3-1.fc38.x86_64 66/137 Verifying : libmodulemd-2.14.0-4.fc37.x86_64 67/137 Verifying : libmount-2.38.1-3.fc38.x86_64 68/137 Verifying : libnghttp2-1.51.0-1.fc38.x86_64 69/137 Verifying : libnsl2-2.0.0-4.fc37.x86_64 70/137 Verifying : libpsl-0.21.1-6.fc37.x86_64 71/137 Verifying : librepo-1.15.1-1.fc38.x86_64 72/137 Verifying : libreport-filesystem-2.17.6-1.fc38.noarch 73/137 Verifying : libselinux-3.4-6.fc38.x86_64 74/137 Verifying : libsemanage-3.4-6.fc38.x86_64 75/137 Verifying : libsepol-3.4-4.fc38.x86_64 76/137 Verifying : libsigsegv-2.14-3.fc37.x86_64 77/137 Verifying : libsmartcols-2.38.1-3.fc38.x86_64 78/137 Verifying : libsolv-0.7.22-3.fc37.x86_64 79/137 Verifying : libssh-0.10.4-2.fc38.x86_64 80/137 Verifying : libssh-config-0.10.4-2.fc38.noarch 81/137 Verifying : libtasn1-4.19.0-1.fc38.x86_64 82/137 Verifying : libtirpc-1.3.3-0.fc37.x86_64 83/137 Verifying : libunistring-1.0-2.fc37.x86_64 84/137 Verifying : libuuid-2.38.1-3.fc38.x86_64 85/137 Verifying : libverto-0.3.2-4.fc37.x86_64 86/137 Verifying : libxcrypt-4.4.33-5.fc38.x86_64 87/137 Verifying : libxml2-2.10.3-2.fc38.x86_64 88/137 Verifying : libyaml-0.2.5-8.fc37.x86_64 89/137 Verifying : libzstd-1.5.2-3.fc37.x86_64 90/137 Verifying : lua-libs-5.4.4-6.fc38.x86_64 91/137 Verifying : lz4-libs-1.9.3-5.fc37.x86_64 92/137 Verifying : mpdecimal-2.5.1-4.fc37.x86_64 93/137 Verifying : mpfr-4.1.1-2.fc38.x86_64 94/137 Verifying : ncurses-base-6.3-5.20221126.fc38.noarch 95/137 Verifying : ncurses-libs-6.3-5.20221126.fc38.x86_64 96/137 Verifying : nettle-3.8-2.fc37.x86_64 97/137 Verifying : npth-1.6-10.fc38.x86_64 98/137 Verifying : openldap-2.6.3-1.fc38.x86_64 99/137 Verifying : openssl-libs-1:3.0.5-6.fc38.x86_64 100/137 Verifying : p11-kit-0.24.1-5.fc38.x86_64 101/137 Verifying : p11-kit-trust-0.24.1-5.fc38.x86_64 102/137 Verifying : pcre2-10.40-1.fc37.1.x86_64 103/137 Verifying : pcre2-syntax-10.40-1.fc37.1.noarch 104/137 Verifying : popt-1.19-1.fc38.x86_64 105/137 Verifying : publicsuffix-list-dafsa-20221208-1.fc38.noarch 106/137 Verifying : python-pip-wheel-22.3.1-1.fc38.noarch 107/137 Verifying : python-setuptools-wheel-65.5.1-1.fc38.noarch 108/137 Verifying : python3-3.11.1-1.fc38.x86_64 109/137 Verifying : python3-dateutil-1:2.8.2-4.fc37.noarch 110/137 Verifying : python3-dbus-1.3.2-1.fc38.x86_64 111/137 Verifying : python3-distro-1.8.0-1.fc38.noarch 112/137 Verifying : python3-dnf-4.14.0-1.fc38.noarch 113/137 Verifying : python3-dnf-plugins-core-4.3.1-1.fc38.noarch 114/137 Verifying : python3-gpg-1.17.1-3.fc38.x86_64 115/137 Verifying : python3-hawkey-0.68.0-1.fc38.x86_64 116/137 Verifying : python3-libcomps-0.1.18-4.fc37.x86_64 117/137 Verifying : python3-libdnf-0.68.0-1.fc38.x86_64 118/137 Verifying : python3-libs-3.11.1-1.fc38.x86_64 119/137 Verifying : python3-rpm-4.18.0-8.fc38.x86_64 120/137 Verifying : python3-six-1.16.0-8.fc37.noarch 121/137 Verifying : readline-8.2-2.fc38.x86_64 122/137 Verifying : rpm-4.18.0-8.fc38.x86_64 123/137 Verifying : rpm-build-libs-4.18.0-8.fc38.x86_64 124/137 Verifying : rpm-libs-4.18.0-8.fc38.x86_64 125/137 Verifying : rpm-sequoia-1.2.0-1.fc38.x86_64 126/137 Verifying : rpm-sign-libs-4.18.0-8.fc38.x86_64 127/137 Verifying : sed-4.8-11.fc37.x86_64 128/137 Verifying : setup-2.14.3-1.fc38.noarch 129/137 Verifying : shadow-utils-2:4.13-3.fc38.x86_64 130/137 Verifying : sqlite-libs-3.40.0-1.fc38.x86_64 131/137 Verifying : systemd-libs-252.4-598.fc38.x86_64 132/137 Verifying : tpm2-tss-4.0.0-0.1.rc2.fc38.x86_64 133/137 Verifying : tzdata-2022g-1.fc38.noarch 134/137 Verifying : xz-libs-5.2.9-1.fc38.x86_64 135/137 Verifying : zchunk-libs-1.2.3-1.fc38.x86_64 136/137 Verifying : zlib-1.2.13-1.fc38.x86_64 137/137 Installed products updated. Installed: alternatives-1.21-1.fc38.x86_64 audit-libs-3.0.9-2.fc38.x86_64 basesystem-11-14.fc37.noarch bash-5.2.9-3.fc38.x86_64 bzip2-libs-1.0.8-12.fc37.x86_64 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-8.fc38.x86_64 coreutils-common-9.1-8.fc38.x86_64 crypto-policies-20221215-1.gita4c31a3.fc38.noarch curl-7.87.0-1.fc38.x86_64 cyrus-sasl-lib-2.1.28-8.fc38.x86_64 dbus-libs-1:1.14.4-1.fc38.x86_64 dnf-4.14.0-1.fc38.noarch dnf-data-4.14.0-1.fc38.noarch dnf-plugins-core-4.3.1-1.fc38.noarch elfutils-default-yama-scope-0.188-3.fc38.noarch elfutils-libelf-0.188-3.fc38.x86_64 elfutils-libs-0.188-3.fc38.x86_64 expat-2.5.0-1.fc38.x86_64 fedora-gpg-keys-38-0.3.noarch fedora-release-38-0.6.noarch fedora-release-common-38-0.6.noarch fedora-release-identity-basic-38-0.6.noarch fedora-repos-38-0.3.noarch fedora-repos-rawhide-38-0.3.noarch file-libs-5.42-4.fc37.x86_64 filesystem-3.18-2.fc37.x86_64 findutils-1:4.9.0-2.fc37.x86_64 gawk-5.1.1-4.fc37.x86_64 gdbm-libs-1:1.23-2.fc37.x86_64 glib2-2.74.1-2.fc38.x86_64 glibc-2.36.9000-19.fc38.x86_64 glibc-common-2.36.9000-19.fc38.x86_64 glibc-minimal-langpack-2.36.9000-19.fc38.x86_64 gmp-1:6.2.1-3.fc37.x86_64 gnupg2-2.3.8-1.fc38.x86_64 gnutls-3.7.8-9.fc38.x86_64 gpgme-1.17.1-3.fc38.x86_64 grep-3.8-1.fc38.x86_64 ima-evm-utils-1.4-6.fc37.x86_64 json-c-0.16-3.fc38.x86_64 keyutils-libs-1.6.1-5.fc37.x86_64 krb5-libs-1.20.1-3.fc38.x86_64 libacl-2.3.1-4.fc37.x86_64 libarchive-3.6.1-3.fc38.x86_64 libassuan-2.5.5-5.fc37.x86_64 libattr-2.5.1-5.fc37.x86_64 libb2-0.98.1-7.fc37.x86_64 libblkid-2.38.1-3.fc38.x86_64 libbrotli-1.0.9-9.fc37.x86_64 libcap-2.48-5.fc37.x86_64 libcap-ng-0.8.3-4.fc38.x86_64 libcom_err-1.46.5-3.fc37.x86_64 libcomps-0.1.18-4.fc37.x86_64 libcurl-7.87.0-1.fc38.x86_64 libdnf-0.68.0-1.fc38.x86_64 libevent-2.1.12-7.fc37.x86_64 libffi-3.4.4-1.fc38.x86_64 libfsverity-1.4-8.fc37.x86_64 libgcc-13.0.0-0.4.fc38.x86_64 libgcrypt-1.10.1-6.fc38.x86_64 libgomp-13.0.0-0.4.fc38.x86_64 libgpg-error-1.46-1.fc38.x86_64 libidn2-2.3.4-1.fc38.x86_64 libksba-1.6.3-1.fc38.x86_64 libmodulemd-2.14.0-4.fc37.x86_64 libmount-2.38.1-3.fc38.x86_64 libnghttp2-1.51.0-1.fc38.x86_64 libnsl2-2.0.0-4.fc37.x86_64 libpsl-0.21.1-6.fc37.x86_64 librepo-1.15.1-1.fc38.x86_64 libreport-filesystem-2.17.6-1.fc38.noarch libselinux-3.4-6.fc38.x86_64 libsemanage-3.4-6.fc38.x86_64 libsepol-3.4-4.fc38.x86_64 libsigsegv-2.14-3.fc37.x86_64 libsmartcols-2.38.1-3.fc38.x86_64 libsolv-0.7.22-3.fc37.x86_64 libssh-0.10.4-2.fc38.x86_64 libssh-config-0.10.4-2.fc38.noarch libstdc++-13.0.0-0.4.fc38.x86_64 libtasn1-4.19.0-1.fc38.x86_64 libtirpc-1.3.3-0.fc37.x86_64 libunistring-1.0-2.fc37.x86_64 libuuid-2.38.1-3.fc38.x86_64 libverto-0.3.2-4.fc37.x86_64 libxcrypt-4.4.33-5.fc38.x86_64 libxml2-2.10.3-2.fc38.x86_64 libyaml-0.2.5-8.fc37.x86_64 libzstd-1.5.2-3.fc37.x86_64 lua-libs-5.4.4-6.fc38.x86_64 lz4-libs-1.9.3-5.fc37.x86_64 mpdecimal-2.5.1-4.fc37.x86_64 mpfr-4.1.1-2.fc38.x86_64 ncurses-base-6.3-5.20221126.fc38.noarch ncurses-libs-6.3-5.20221126.fc38.x86_64 nettle-3.8-2.fc37.x86_64 npth-1.6-10.fc38.x86_64 openldap-2.6.3-1.fc38.x86_64 openssl-libs-1:3.0.5-6.fc38.x86_64 p11-kit-0.24.1-5.fc38.x86_64 p11-kit-trust-0.24.1-5.fc38.x86_64 pcre2-10.40-1.fc37.1.x86_64 pcre2-syntax-10.40-1.fc37.1.noarch popt-1.19-1.fc38.x86_64 publicsuffix-list-dafsa-20221208-1.fc38.noarch python-pip-wheel-22.3.1-1.fc38.noarch python-setuptools-wheel-65.5.1-1.fc38.noarch python3-3.11.1-1.fc38.x86_64 python3-dateutil-1:2.8.2-4.fc37.noarch python3-dbus-1.3.2-1.fc38.x86_64 python3-distro-1.8.0-1.fc38.noarch python3-dnf-4.14.0-1.fc38.noarch python3-dnf-plugins-core-4.3.1-1.fc38.noarch python3-gpg-1.17.1-3.fc38.x86_64 python3-hawkey-0.68.0-1.fc38.x86_64 python3-libcomps-0.1.18-4.fc37.x86_64 python3-libdnf-0.68.0-1.fc38.x86_64 python3-libs-3.11.1-1.fc38.x86_64 python3-rpm-4.18.0-8.fc38.x86_64 python3-six-1.16.0-8.fc37.noarch readline-8.2-2.fc38.x86_64 rpm-4.18.0-8.fc38.x86_64 rpm-build-libs-4.18.0-8.fc38.x86_64 rpm-libs-4.18.0-8.fc38.x86_64 rpm-sequoia-1.2.0-1.fc38.x86_64 rpm-sign-libs-4.18.0-8.fc38.x86_64 sed-4.8-11.fc37.x86_64 setup-2.14.3-1.fc38.noarch shadow-utils-2:4.13-3.fc38.x86_64 sqlite-libs-3.40.0-1.fc38.x86_64 systemd-libs-252.4-598.fc38.x86_64 tpm2-tss-4.0.0-0.1.rc2.fc38.x86_64 tzdata-2022g-1.fc38.noarch xz-libs-5.2.9-1.fc38.x86_64 zchunk-libs-1.2.3-1.fc38.x86_64 zlib-1.2.13-1.fc38.x86_64 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 211 kB/s | 110 kB 00:00 Additional repo https_jakub_fedorapeople_org_fe 156 kB/s | 92 kB 00:00 fedora 28 MB/s | 65 MB 00:02 Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing group/module packages: bash x86_64 5.2.9-3.fc38 fedora 1.8 M bzip2 x86_64 1.0.8-12.fc37 fedora 52 k coreutils x86_64 9.1-8.fc38 fedora 1.1 M cpio x86_64 2.13-13.fc38 fedora 276 k diffutils x86_64 3.8-3.fc37 fedora 378 k fedora-release-common noarch 38-0.6 fedora 21 k findutils x86_64 1:4.9.0-2.fc37 fedora 492 k gawk x86_64 5.1.1-4.fc37 fedora 1.0 M glibc-minimal-langpack x86_64 2.36.9000-19.fc38 fedora 30 k grep x86_64 3.8-1.fc38 fedora 292 k gzip x86_64 1.12-2.fc37 fedora 166 k info x86_64 7.0.1-1.fc38 fedora 181 k patch x86_64 2.7.6-17.fc37 fedora 124 k redhat-rpm-config noarch 235-1.fc38 fedora 80 k rpm-build x86_64 4.18.0-8.fc38 fedora 77 k sed x86_64 4.8-11.fc37 fedora 306 k shadow-utils x86_64 2:4.13-3.fc38 fedora 1.3 M tar x86_64 2:1.34-5.fc38 fedora 885 k unzip x86_64 6.0-58.fc38 fedora 182 k util-linux x86_64 2.38.1-3.fc38 fedora 2.3 M which x86_64 2.21-36.fc38 fedora 41 k xz x86_64 5.2.9-1.fc38 fedora 306 k Installing dependencies: alternatives x86_64 1.21-1.fc38 fedora 38 k ansible-srpm-macros noarch 1-8.1.fc38 fedora 8.6 k audit-libs x86_64 3.0.9-2.fc38 fedora 116 k authselect x86_64 1.4.2-1.fc38 fedora 144 k authselect-libs x86_64 1.4.2-1.fc38 fedora 250 k basesystem noarch 11-14.fc37 fedora 7.0 k binutils x86_64 2.39-6.fc38 fedora 5.5 M binutils-gold x86_64 2.39-6.fc38 fedora 777 k bzip2-libs x86_64 1.0.8-12.fc37 fedora 41 k ca-certificates noarch 2022.2.54-5.fc37 fedora 829 k coreutils-common x86_64 9.1-8.fc38 fedora 2.0 M cracklib x86_64 2.9.7-30.fc38 fedora 92 k crypto-policies noarch 20221215-1.gita4c31a3.fc38 fedora 90 k curl x86_64 7.87.0-1.fc38 fedora 344 k cyrus-sasl-lib x86_64 2.1.28-8.fc38 fedora 792 k debugedit x86_64 5.0-5.fc37 fedora 77 k dwz x86_64 0.15-1.fc38 fedora 136 k ed x86_64 1.18-2.fc37 fedora 78 k efi-srpm-macros noarch 5-6.fc37 fedora 22 k elfutils x86_64 0.188-3.fc38 fedora 529 k elfutils-debuginfod-client x86_64 0.188-3.fc38 fedora 40 k elfutils-default-yama-scope noarch 0.188-3.fc38 fedora 15 k elfutils-libelf x86_64 0.188-3.fc38 fedora 196 k elfutils-libs x86_64 0.188-3.fc38 fedora 257 k fedora-gpg-keys noarch 38-0.3 fedora 125 k fedora-release noarch 38-0.6 fedora 11 k fedora-release-identity-basic noarch 38-0.6 fedora 11 k fedora-repos noarch 38-0.3 fedora 10 k fedora-repos-rawhide noarch 38-0.3 fedora 9.7 k file x86_64 5.42-4.fc37 fedora 49 k file-libs x86_64 5.42-4.fc37 fedora 676 k filesystem x86_64 3.18-2.fc37 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-10.fc38 fedora 26 k fpc-srpm-macros noarch 1.3-6.fc37 fedora 7.7 k gdb-minimal x86_64 12.1-10.fc38 fedora 3.7 M gdbm-libs x86_64 1:1.23-2.fc37 fedora 56 k ghc-srpm-macros noarch 1.5.0-7.fc37 fedora 7.8 k glibc x86_64 2.36.9000-19.fc38 fedora 2.1 M glibc-common x86_64 2.36.9000-19.fc38 fedora 309 k glibc-gconv-extra x86_64 2.36.9000-19.fc38 fedora 1.6 M gmp x86_64 1:6.2.1-3.fc37 fedora 315 k gnat-srpm-macros noarch 4-16.fc37 fedora 8.3 k go-srpm-macros noarch 3.2.0-1.fc38 fedora 27 k jansson x86_64 2.13.1-5.fc37 fedora 44 k kernel-srpm-macros noarch 1.0-15.fc37 fedora 9.4 k keyutils-libs x86_64 1.6.1-5.fc37 fedora 31 k krb5-libs x86_64 1.20.1-3.fc38 fedora 723 k libacl x86_64 2.3.1-4.fc37 fedora 23 k libarchive x86_64 3.6.1-3.fc38 fedora 397 k libattr x86_64 2.5.1-5.fc37 fedora 18 k libblkid x86_64 2.38.1-3.fc38 fedora 106 k libbrotli x86_64 1.0.9-9.fc37 fedora 315 k libcap x86_64 2.48-5.fc37 fedora 67 k libcap-ng x86_64 0.8.3-4.fc38 fedora 32 k libcom_err x86_64 1.46.5-3.fc37 fedora 25 k libcurl x86_64 7.87.0-1.fc38 fedora 301 k libdb x86_64 5.3.28-54.fc38 fedora 764 k libeconf x86_64 0.4.0-4.fc37 fedora 27 k libevent x86_64 2.1.12-7.fc37 fedora 261 k libfdisk x86_64 2.38.1-3.fc38 fedora 160 k libffi x86_64 3.4.4-1.fc38 fedora 38 k libgcc x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 93 k libgomp x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 300 k libidn2 x86_64 2.3.4-1.fc38 fedora 160 k libmount x86_64 2.38.1-3.fc38 fedora 135 k libnghttp2 x86_64 1.51.0-1.fc38 fedora 75 k libnsl2 x86_64 2.0.0-4.fc37 fedora 30 k libpkgconf x86_64 1.8.0-3.fc37 fedora 36 k libpsl x86_64 0.21.1-6.fc37 fedora 63 k libpwquality x86_64 1.4.5-1.fc38 fedora 119 k libselinux x86_64 3.4-6.fc38 fedora 86 k libsemanage x86_64 3.4-6.fc38 fedora 120 k libsepol x86_64 3.4-4.fc38 fedora 322 k libsigsegv x86_64 2.14-3.fc37 fedora 27 k libsmartcols x86_64 2.38.1-3.fc38 fedora 64 k libssh x86_64 0.10.4-2.fc38 fedora 209 k libssh-config noarch 0.10.4-2.fc38 fedora 8.8 k libstdc++ x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 799 k libtasn1 x86_64 4.19.0-1.fc38 fedora 75 k libtirpc x86_64 1.3.3-0.fc37 fedora 93 k libunistring x86_64 1.0-2.fc37 fedora 549 k libutempter x86_64 1.2.1-7.fc37 fedora 26 k libuuid x86_64 2.38.1-3.fc38 fedora 27 k libverto x86_64 0.3.2-4.fc37 fedora 21 k libxcrypt x86_64 4.4.33-5.fc38 fedora 120 k libxml2 x86_64 2.10.3-2.fc38 fedora 705 k libzstd x86_64 1.5.2-3.fc37 fedora 294 k lua-libs x86_64 5.4.4-6.fc38 fedora 131 k lua-srpm-macros noarch 1-7.fc37 fedora 8.8 k lz4-libs x86_64 1.9.3-5.fc37 fedora 70 k mpfr x86_64 4.1.1-2.fc38 fedora 598 k ncurses-base noarch 6.3-5.20221126.fc38 fedora 86 k ncurses-libs x86_64 6.3-5.20221126.fc38 fedora 329 k nettle x86_64 3.8-2.fc37 fedora 414 k nim-srpm-macros noarch 3-7.fc37 fedora 8.4 k ocaml-srpm-macros noarch 7-2.fc37 fedora 13 k openblas-srpm-macros noarch 2-12.fc37 fedora 7.5 k openldap x86_64 2.6.3-1.fc38 fedora 254 k openssl-libs x86_64 1:3.0.5-6.fc38 fedora 2.1 M p11-kit x86_64 0.24.1-5.fc38 fedora 376 k p11-kit-trust x86_64 0.24.1-5.fc38 fedora 137 k package-notes-srpm-macros noarch 0.5-6.fc38 fedora 11 k pam x86_64 1.5.2-15.fc38 fedora 559 k pam-libs x86_64 1.5.2-15.fc38 fedora 57 k pcre2 x86_64 10.40-1.fc37.1 fedora 236 k pcre2-syntax noarch 10.40-1.fc37.1 fedora 142 k perl-srpm-macros noarch 1-47.fc38 fedora 8.2 k pkgconf x86_64 1.8.0-3.fc37 fedora 41 k pkgconf-m4 noarch 1.8.0-3.fc37 fedora 14 k pkgconf-pkg-config x86_64 1.8.0-3.fc37 fedora 10 k popt x86_64 1.19-1.fc38 fedora 66 k publicsuffix-list-dafsa noarch 20221208-1.fc38 fedora 59 k python-srpm-macros noarch 3.11-6.fc38 fedora 25 k qt5-srpm-macros noarch 5.15.7-1.fc38 fedora 7.9 k readline x86_64 8.2-2.fc38 fedora 211 k rpm x86_64 4.18.0-8.fc38 fedora 572 k rpm-build-libs x86_64 4.18.0-8.fc38 fedora 94 k rpm-libs x86_64 4.18.0-8.fc38 fedora 309 k rpm-sequoia x86_64 1.2.0-1.fc38 fedora 829 k rpmautospec-rpm-macros noarch 0.3.1-1.fc38 fedora 8.8 k rust-srpm-macros noarch 23-1.fc38 fedora 9.4 k setup noarch 2.14.3-1.fc38 fedora 152 k sqlite-libs x86_64 3.40.0-1.fc38 fedora 661 k systemd-libs x86_64 252.4-598.fc38 fedora 632 k tzdata noarch 2022g-1.fc38 fedora 716 k util-linux-core x86_64 2.38.1-3.fc38 fedora 470 k xxhash-libs x86_64 0.8.1-3.fc37 fedora 41 k xz-libs x86_64 5.2.9-1.fc38 fedora 93 k zip x86_64 3.0-35.fc38 fedora 259 k zlib x86_64 1.2.13-1.fc38 fedora 94 k zstd x86_64 1.5.2-3.fc37 fedora 447 k Installing Groups: Buildsystem building group Transaction Summary ========================================================================================================================= Install 153 Packages Total download size: 52 M Installed size: 181 M Downloading Packages: (1/153): libgcc-13.0.0-0.4.fc38.x86_64.rpm 277 kB/s | 93 kB 00:00 (2/153): libgomp-13.0.0-0.4.fc38.x86_64.rpm 809 kB/s | 300 kB 00:00 (3/153): libstdc++-13.0.0-0.4.fc38.x86_64.rpm 2.1 MB/s | 799 kB 00:00 (4/153): ansible-srpm-macros-1-8.1.fc38.noarch. 91 kB/s | 8.6 kB 00:00 (5/153): alternatives-1.21-1.fc38.x86_64.rpm 276 kB/s | 38 kB 00:00 (6/153): authselect-1.4.2-1.fc38.x86_64.rpm 1.3 MB/s | 144 kB 00:00 (7/153): audit-libs-3.0.9-2.fc38.x86_64.rpm 579 kB/s | 116 kB 00:00 (8/153): authselect-libs-1.4.2-1.fc38.x86_64.rp 2.2 MB/s | 250 kB 00:00 (9/153): basesystem-11-14.fc37.noarch.rpm 234 kB/s | 7.0 kB 00:00 (10/153): binutils-gold-2.39-6.fc38.x86_64.rpm 6.6 MB/s | 777 kB 00:00 (11/153): bash-5.2.9-3.fc38.x86_64.rpm 11 MB/s | 1.8 MB 00:00 (12/153): bzip2-1.0.8-12.fc37.x86_64.rpm 1.0 MB/s | 52 kB 00:00 (13/153): binutils-2.39-6.fc38.x86_64.rpm 27 MB/s | 5.5 MB 00:00 (14/153): bzip2-libs-1.0.8-12.fc37.x86_64.rpm 984 kB/s | 41 kB 00:00 (15/153): coreutils-9.1-8.fc38.x86_64.rpm 23 MB/s | 1.1 MB 00:00 (16/153): ca-certificates-2022.2.54-5.fc37.noar 12 MB/s | 829 kB 00:00 (17/153): cpio-2.13-13.fc38.x86_64.rpm 7.0 MB/s | 276 kB 00:00 (18/153): cracklib-2.9.7-30.fc38.x86_64.rpm 2.2 MB/s | 92 kB 00:00 (19/153): coreutils-common-9.1-8.fc38.x86_64.rp 22 MB/s | 2.0 MB 00:00 (20/153): crypto-policies-20221215-1.gita4c31a3 2.9 MB/s | 90 kB 00:00 (21/153): curl-7.87.0-1.fc38.x86_64.rpm 8.2 MB/s | 344 kB 00:00 (22/153): cyrus-sasl-lib-2.1.28-8.fc38.x86_64.r 18 MB/s | 792 kB 00:00 (23/153): debugedit-5.0-5.fc37.x86_64.rpm 2.5 MB/s | 77 kB 00:00 (24/153): dwz-0.15-1.fc38.x86_64.rpm 4.2 MB/s | 136 kB 00:00 (25/153): diffutils-3.8-3.fc37.x86_64.rpm 9.2 MB/s | 378 kB 00:00 (26/153): ed-1.18-2.fc37.x86_64.rpm 2.5 MB/s | 78 kB 00:00 (27/153): efi-srpm-macros-5-6.fc37.noarch.rpm 749 kB/s | 22 kB 00:00 (28/153): elfutils-debuginfod-client-0.188-3.fc 1.3 MB/s | 40 kB 00:00 (29/153): elfutils-0.188-3.fc38.x86_64.rpm 12 MB/s | 529 kB 00:00 (30/153): elfutils-default-yama-scope-0.188-3.f 525 kB/s | 15 kB 00:00 (31/153): elfutils-libelf-0.188-3.fc38.x86_64.r 6.1 MB/s | 196 kB 00:00 (32/153): elfutils-libs-0.188-3.fc38.x86_64.rpm 7.0 MB/s | 257 kB 00:00 (33/153): fedora-gpg-keys-38-0.3.noarch.rpm 3.9 MB/s | 125 kB 00:00 (34/153): fedora-release-38-0.6.noarch.rpm 367 kB/s | 11 kB 00:00 (35/153): fedora-release-common-38-0.6.noarch.r 713 kB/s | 21 kB 00:00 (36/153): fedora-release-identity-basic-38-0.6. 390 kB/s | 11 kB 00:00 (37/153): fedora-repos-38-0.3.noarch.rpm 347 kB/s | 10 kB 00:00 (38/153): fedora-repos-rawhide-38-0.3.noarch.rp 330 kB/s | 9.7 kB 00:00 (39/153): file-5.42-4.fc37.x86_64.rpm 1.6 MB/s | 49 kB 00:00 (40/153): file-libs-5.42-4.fc37.x86_64.rpm 17 MB/s | 676 kB 00:00 (41/153): findutils-4.9.0-2.fc37.x86_64.rpm 13 MB/s | 492 kB 00:00 (42/153): fonts-srpm-macros-2.0.5-10.fc38.noarc 817 kB/s | 26 kB 00:00 (43/153): filesystem-3.18-2.fc37.x86_64.rpm 18 MB/s | 1.1 MB 00:00 (44/153): fpc-srpm-macros-1.3-6.fc37.noarch.rpm 262 kB/s | 7.7 kB 00:00 (45/153): gawk-5.1.1-4.fc37.x86_64.rpm 24 MB/s | 1.0 MB 00:00 (46/153): gdbm-libs-1.23-2.fc37.x86_64.rpm 1.4 MB/s | 56 kB 00:00 (47/153): ghc-srpm-macros-1.5.0-7.fc37.noarch.r 258 kB/s | 7.8 kB 00:00 (48/153): gdb-minimal-12.1-10.fc38.x86_64.rpm 31 MB/s | 3.7 MB 00:00 (49/153): glibc-common-2.36.9000-19.fc38.x86_64 5.5 MB/s | 309 kB 00:00 (50/153): glibc-2.36.9000-19.fc38.x86_64.rpm 22 MB/s | 2.1 MB 00:00 (51/153): glibc-minimal-langpack-2.36.9000-19.f 801 kB/s | 30 kB 00:00 (52/153): gmp-6.2.1-3.fc37.x86_64.rpm 7.9 MB/s | 315 kB 00:00 (53/153): glibc-gconv-extra-2.36.9000-19.fc38.x 21 MB/s | 1.6 MB 00:00 (54/153): gnat-srpm-macros-4-16.fc37.noarch.rpm 231 kB/s | 8.3 kB 00:00 (55/153): go-srpm-macros-3.2.0-1.fc38.noarch.rp 911 kB/s | 27 kB 00:00 (56/153): grep-3.8-1.fc38.x86_64.rpm 8.5 MB/s | 292 kB 00:00 (57/153): gzip-1.12-2.fc37.x86_64.rpm 4.7 MB/s | 166 kB 00:00 (58/153): info-7.0.1-1.fc38.x86_64.rpm 5.6 MB/s | 181 kB 00:00 (59/153): jansson-2.13.1-5.fc37.x86_64.rpm 1.5 MB/s | 44 kB 00:00 (60/153): kernel-srpm-macros-1.0-15.fc37.noarch 317 kB/s | 9.4 kB 00:00 (61/153): keyutils-libs-1.6.1-5.fc37.x86_64.rpm 1.0 MB/s | 31 kB 00:00 (62/153): libacl-2.3.1-4.fc37.x86_64.rpm 749 kB/s | 23 kB 00:00 (63/153): krb5-libs-1.20.1-3.fc38.x86_64.rpm 18 MB/s | 723 kB 00:00 (64/153): libarchive-3.6.1-3.fc38.x86_64.rpm 11 MB/s | 397 kB 00:00 (65/153): libattr-2.5.1-5.fc37.x86_64.rpm 609 kB/s | 18 kB 00:00 (66/153): libblkid-2.38.1-3.fc38.x86_64.rpm 3.4 MB/s | 106 kB 00:00 (67/153): libbrotli-1.0.9-9.fc37.x86_64.rpm 9.1 MB/s | 315 kB 00:00 (68/153): libcap-2.48-5.fc37.x86_64.rpm 2.2 MB/s | 67 kB 00:00 (69/153): libcap-ng-0.8.3-4.fc38.x86_64.rpm 1.1 MB/s | 32 kB 00:00 (70/153): libcom_err-1.46.5-3.fc37.x86_64.rpm 859 kB/s | 25 kB 00:00 (71/153): libcurl-7.87.0-1.fc38.x86_64.rpm 8.9 MB/s | 301 kB 00:00 (72/153): libdb-5.3.28-54.fc38.x86_64.rpm 19 MB/s | 764 kB 00:00 (73/153): libeconf-0.4.0-4.fc37.x86_64.rpm 916 kB/s | 27 kB 00:00 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util-linux-2.38.1-3.fc38.x86_64.rpm 20 MB/s | 2.3 MB 00:00 (148/153): xxhash-libs-0.8.1-3.fc37.x86_64.rpm 674 kB/s | 41 kB 00:00 (149/153): xz-5.2.9-1.fc38.x86_64.rpm 4.5 MB/s | 306 kB 00:00 (150/153): xz-libs-5.2.9-1.fc38.x86_64.rpm 1.5 MB/s | 93 kB 00:00 (151/153): zip-3.0-35.fc38.x86_64.rpm 4.2 MB/s | 259 kB 00:00 (152/153): zlib-1.2.13-1.fc38.x86_64.rpm 1.6 MB/s | 94 kB 00:00 (153/153): zstd-1.5.2-3.fc37.x86_64.rpm 7.0 MB/s | 447 kB 00:00 -------------------------------------------------------------------------------- Total 19 MB/s | 52 MB 00:02 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-2.fc37.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.0.0-0.4.fc38.x86_64 1/153 Running scriptlet: libgcc-13.0.0-0.4.fc38.x86_64 1/153 Installing : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 2/153 Running scriptlet: crypto-policies-20221215-1.gita4c31a3.fc38.noarc 2/153 Installing : fedora-release-identity-basic-38-0.6.noarch 3/153 Installing : tzdata-2022g-1.fc38.noarch 4/153 Installing : rust-srpm-macros-23-1.fc38.noarch 5/153 Installing : qt5-srpm-macros-5.15.7-1.fc38.noarch 6/153 Installing : publicsuffix-list-dafsa-20221208-1.fc38.noarch 7/153 Installing : pkgconf-m4-1.8.0-3.fc37.noarch 8/153 Installing : perl-srpm-macros-1-47.fc38.noarch 9/153 Installing : pcre2-syntax-10.40-1.fc37.1.noarch 10/153 Installing : package-notes-srpm-macros-0.5-6.fc38.noarch 11/153 Installing : openblas-srpm-macros-2-12.fc37.noarch 12/153 Installing : ocaml-srpm-macros-7-2.fc37.noarch 13/153 Installing : nim-srpm-macros-3-7.fc37.noarch 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which-2.21-36.fc38.x86_64 152/153 Installing : info-7.0.1-1.fc38.x86_64 153/153 Running scriptlet: filesystem-3.18-2.fc37.x86_64 153/153 Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch 153/153 Running scriptlet: authselect-libs-1.4.2-1.fc38.x86_64 153/153 Running scriptlet: rpm-4.18.0-8.fc38.x86_64 153/153 Running scriptlet: info-7.0.1-1.fc38.x86_64 153/153 Verifying : libgcc-13.0.0-0.4.fc38.x86_64 1/153 Verifying : libgomp-13.0.0-0.4.fc38.x86_64 2/153 Verifying : libstdc++-13.0.0-0.4.fc38.x86_64 3/153 Verifying : alternatives-1.21-1.fc38.x86_64 4/153 Verifying : ansible-srpm-macros-1-8.1.fc38.noarch 5/153 Verifying : audit-libs-3.0.9-2.fc38.x86_64 6/153 Verifying : authselect-1.4.2-1.fc38.x86_64 7/153 Verifying : authselect-libs-1.4.2-1.fc38.x86_64 8/153 Verifying : basesystem-11-14.fc37.noarch 9/153 Verifying : bash-5.2.9-3.fc38.x86_64 10/153 Verifying : binutils-2.39-6.fc38.x86_64 11/153 Verifying : binutils-gold-2.39-6.fc38.x86_64 12/153 Verifying : bzip2-1.0.8-12.fc37.x86_64 13/153 Verifying : bzip2-libs-1.0.8-12.fc37.x86_64 14/153 Verifying : ca-certificates-2022.2.54-5.fc37.noarch 15/153 Verifying : coreutils-9.1-8.fc38.x86_64 16/153 Verifying : coreutils-common-9.1-8.fc38.x86_64 17/153 Verifying : cpio-2.13-13.fc38.x86_64 18/153 Verifying : cracklib-2.9.7-30.fc38.x86_64 19/153 Verifying : crypto-policies-20221215-1.gita4c31a3.fc38.noarc 20/153 Verifying : curl-7.87.0-1.fc38.x86_64 21/153 Verifying : cyrus-sasl-lib-2.1.28-8.fc38.x86_64 22/153 Verifying : debugedit-5.0-5.fc37.x86_64 23/153 Verifying : diffutils-3.8-3.fc37.x86_64 24/153 Verifying : dwz-0.15-1.fc38.x86_64 25/153 Verifying : ed-1.18-2.fc37.x86_64 26/153 Verifying : efi-srpm-macros-5-6.fc37.noarch 27/153 Verifying : elfutils-0.188-3.fc38.x86_64 28/153 Verifying : elfutils-debuginfod-client-0.188-3.fc38.x86_64 29/153 Verifying : elfutils-default-yama-scope-0.188-3.fc38.noarch 30/153 Verifying : elfutils-libelf-0.188-3.fc38.x86_64 31/153 Verifying : elfutils-libs-0.188-3.fc38.x86_64 32/153 Verifying : fedora-gpg-keys-38-0.3.noarch 33/153 Verifying : fedora-release-38-0.6.noarch 34/153 Verifying : fedora-release-common-38-0.6.noarch 35/153 Verifying : fedora-release-identity-basic-38-0.6.noarch 36/153 Verifying : fedora-repos-38-0.3.noarch 37/153 Verifying : fedora-repos-rawhide-38-0.3.noarch 38/153 Verifying : file-5.42-4.fc37.x86_64 39/153 Verifying : file-libs-5.42-4.fc37.x86_64 40/153 Verifying : filesystem-3.18-2.fc37.x86_64 41/153 Verifying : findutils-1:4.9.0-2.fc37.x86_64 42/153 Verifying : fonts-srpm-macros-1:2.0.5-10.fc38.noarch 43/153 Verifying : fpc-srpm-macros-1.3-6.fc37.noarch 44/153 Verifying : gawk-5.1.1-4.fc37.x86_64 45/153 Verifying : gdb-minimal-12.1-10.fc38.x86_64 46/153 Verifying : gdbm-libs-1:1.23-2.fc37.x86_64 47/153 Verifying : ghc-srpm-macros-1.5.0-7.fc37.noarch 48/153 Verifying : glibc-2.36.9000-19.fc38.x86_64 49/153 Verifying : glibc-common-2.36.9000-19.fc38.x86_64 50/153 Verifying : glibc-gconv-extra-2.36.9000-19.fc38.x86_64 51/153 Verifying : glibc-minimal-langpack-2.36.9000-19.fc38.x86_64 52/153 Verifying : gmp-1:6.2.1-3.fc37.x86_64 53/153 Verifying : gnat-srpm-macros-4-16.fc37.noarch 54/153 Verifying : go-srpm-macros-3.2.0-1.fc38.noarch 55/153 Verifying : grep-3.8-1.fc38.x86_64 56/153 Verifying : gzip-1.12-2.fc37.x86_64 57/153 Verifying : info-7.0.1-1.fc38.x86_64 58/153 Verifying : jansson-2.13.1-5.fc37.x86_64 59/153 Verifying : kernel-srpm-macros-1.0-15.fc37.noarch 60/153 Verifying : keyutils-libs-1.6.1-5.fc37.x86_64 61/153 Verifying : krb5-libs-1.20.1-3.fc38.x86_64 62/153 Verifying : libacl-2.3.1-4.fc37.x86_64 63/153 Verifying : libarchive-3.6.1-3.fc38.x86_64 64/153 Verifying : libattr-2.5.1-5.fc37.x86_64 65/153 Verifying : libblkid-2.38.1-3.fc38.x86_64 66/153 Verifying : libbrotli-1.0.9-9.fc37.x86_64 67/153 Verifying : libcap-2.48-5.fc37.x86_64 68/153 Verifying : libcap-ng-0.8.3-4.fc38.x86_64 69/153 Verifying : libcom_err-1.46.5-3.fc37.x86_64 70/153 Verifying : libcurl-7.87.0-1.fc38.x86_64 71/153 Verifying : libdb-5.3.28-54.fc38.x86_64 72/153 Verifying : libeconf-0.4.0-4.fc37.x86_64 73/153 Verifying : libevent-2.1.12-7.fc37.x86_64 74/153 Verifying : libfdisk-2.38.1-3.fc38.x86_64 75/153 Verifying : libffi-3.4.4-1.fc38.x86_64 76/153 Verifying : libidn2-2.3.4-1.fc38.x86_64 77/153 Verifying : libmount-2.38.1-3.fc38.x86_64 78/153 Verifying : libnghttp2-1.51.0-1.fc38.x86_64 79/153 Verifying : libnsl2-2.0.0-4.fc37.x86_64 80/153 Verifying : libpkgconf-1.8.0-3.fc37.x86_64 81/153 Verifying : libpsl-0.21.1-6.fc37.x86_64 82/153 Verifying : libpwquality-1.4.5-1.fc38.x86_64 83/153 Verifying : libselinux-3.4-6.fc38.x86_64 84/153 Verifying : libsemanage-3.4-6.fc38.x86_64 85/153 Verifying : libsepol-3.4-4.fc38.x86_64 86/153 Verifying : libsigsegv-2.14-3.fc37.x86_64 87/153 Verifying : libsmartcols-2.38.1-3.fc38.x86_64 88/153 Verifying : libssh-0.10.4-2.fc38.x86_64 89/153 Verifying : libssh-config-0.10.4-2.fc38.noarch 90/153 Verifying : libtasn1-4.19.0-1.fc38.x86_64 91/153 Verifying : libtirpc-1.3.3-0.fc37.x86_64 92/153 Verifying : libunistring-1.0-2.fc37.x86_64 93/153 Verifying : libutempter-1.2.1-7.fc37.x86_64 94/153 Verifying : libuuid-2.38.1-3.fc38.x86_64 95/153 Verifying : libverto-0.3.2-4.fc37.x86_64 96/153 Verifying : libxcrypt-4.4.33-5.fc38.x86_64 97/153 Verifying : libxml2-2.10.3-2.fc38.x86_64 98/153 Verifying : libzstd-1.5.2-3.fc37.x86_64 99/153 Verifying : lua-libs-5.4.4-6.fc38.x86_64 100/153 Verifying : lua-srpm-macros-1-7.fc37.noarch 101/153 Verifying : lz4-libs-1.9.3-5.fc37.x86_64 102/153 Verifying : mpfr-4.1.1-2.fc38.x86_64 103/153 Verifying : ncurses-base-6.3-5.20221126.fc38.noarch 104/153 Verifying : ncurses-libs-6.3-5.20221126.fc38.x86_64 105/153 Verifying : nettle-3.8-2.fc37.x86_64 106/153 Verifying : nim-srpm-macros-3-7.fc37.noarch 107/153 Verifying : ocaml-srpm-macros-7-2.fc37.noarch 108/153 Verifying : openblas-srpm-macros-2-12.fc37.noarch 109/153 Verifying : openldap-2.6.3-1.fc38.x86_64 110/153 Verifying : openssl-libs-1:3.0.5-6.fc38.x86_64 111/153 Verifying : p11-kit-0.24.1-5.fc38.x86_64 112/153 Verifying : p11-kit-trust-0.24.1-5.fc38.x86_64 113/153 Verifying : package-notes-srpm-macros-0.5-6.fc38.noarch 114/153 Verifying : pam-1.5.2-15.fc38.x86_64 115/153 Verifying : pam-libs-1.5.2-15.fc38.x86_64 116/153 Verifying : patch-2.7.6-17.fc37.x86_64 117/153 Verifying : pcre2-10.40-1.fc37.1.x86_64 118/153 Verifying : pcre2-syntax-10.40-1.fc37.1.noarch 119/153 Verifying : perl-srpm-macros-1-47.fc38.noarch 120/153 Verifying : pkgconf-1.8.0-3.fc37.x86_64 121/153 Verifying : pkgconf-m4-1.8.0-3.fc37.noarch 122/153 Verifying : pkgconf-pkg-config-1.8.0-3.fc37.x86_64 123/153 Verifying : popt-1.19-1.fc38.x86_64 124/153 Verifying : publicsuffix-list-dafsa-20221208-1.fc38.noarch 125/153 Verifying : python-srpm-macros-3.11-6.fc38.noarch 126/153 Verifying : qt5-srpm-macros-5.15.7-1.fc38.noarch 127/153 Verifying : readline-8.2-2.fc38.x86_64 128/153 Verifying : redhat-rpm-config-235-1.fc38.noarch 129/153 Verifying : rpm-4.18.0-8.fc38.x86_64 130/153 Verifying : rpm-build-4.18.0-8.fc38.x86_64 131/153 Verifying : rpm-build-libs-4.18.0-8.fc38.x86_64 132/153 Verifying : rpm-libs-4.18.0-8.fc38.x86_64 133/153 Verifying : rpm-sequoia-1.2.0-1.fc38.x86_64 134/153 Verifying : rpmautospec-rpm-macros-0.3.1-1.fc38.noarch 135/153 Verifying : rust-srpm-macros-23-1.fc38.noarch 136/153 Verifying : sed-4.8-11.fc37.x86_64 137/153 Verifying : setup-2.14.3-1.fc38.noarch 138/153 Verifying : shadow-utils-2:4.13-3.fc38.x86_64 139/153 Verifying : sqlite-libs-3.40.0-1.fc38.x86_64 140/153 Verifying : systemd-libs-252.4-598.fc38.x86_64 141/153 Verifying : tar-2:1.34-5.fc38.x86_64 142/153 Verifying : tzdata-2022g-1.fc38.noarch 143/153 Verifying : unzip-6.0-58.fc38.x86_64 144/153 Verifying : util-linux-2.38.1-3.fc38.x86_64 145/153 Verifying : util-linux-core-2.38.1-3.fc38.x86_64 146/153 Verifying : which-2.21-36.fc38.x86_64 147/153 Verifying : xxhash-libs-0.8.1-3.fc37.x86_64 148/153 Verifying : xz-5.2.9-1.fc38.x86_64 149/153 Verifying : xz-libs-5.2.9-1.fc38.x86_64 150/153 Verifying : zip-3.0-35.fc38.x86_64 151/153 Verifying : zlib-1.2.13-1.fc38.x86_64 152/153 Verifying : zstd-1.5.2-3.fc37.x86_64 153/153 Installed: alternatives-1.21-1.fc38.x86_64 ansible-srpm-macros-1-8.1.fc38.noarch audit-libs-3.0.9-2.fc38.x86_64 authselect-1.4.2-1.fc38.x86_64 authselect-libs-1.4.2-1.fc38.x86_64 basesystem-11-14.fc37.noarch bash-5.2.9-3.fc38.x86_64 binutils-2.39-6.fc38.x86_64 binutils-gold-2.39-6.fc38.x86_64 bzip2-1.0.8-12.fc37.x86_64 bzip2-libs-1.0.8-12.fc37.x86_64 ca-certificates-2022.2.54-5.fc37.noarch coreutils-9.1-8.fc38.x86_64 coreutils-common-9.1-8.fc38.x86_64 cpio-2.13-13.fc38.x86_64 cracklib-2.9.7-30.fc38.x86_64 crypto-policies-20221215-1.gita4c31a3.fc38.noarch curl-7.87.0-1.fc38.x86_64 cyrus-sasl-lib-2.1.28-8.fc38.x86_64 debugedit-5.0-5.fc37.x86_64 diffutils-3.8-3.fc37.x86_64 dwz-0.15-1.fc38.x86_64 ed-1.18-2.fc37.x86_64 efi-srpm-macros-5-6.fc37.noarch elfutils-0.188-3.fc38.x86_64 elfutils-debuginfod-client-0.188-3.fc38.x86_64 elfutils-default-yama-scope-0.188-3.fc38.noarch elfutils-libelf-0.188-3.fc38.x86_64 elfutils-libs-0.188-3.fc38.x86_64 fedora-gpg-keys-38-0.3.noarch fedora-release-38-0.6.noarch fedora-release-common-38-0.6.noarch fedora-release-identity-basic-38-0.6.noarch fedora-repos-38-0.3.noarch fedora-repos-rawhide-38-0.3.noarch file-5.42-4.fc37.x86_64 file-libs-5.42-4.fc37.x86_64 filesystem-3.18-2.fc37.x86_64 findutils-1:4.9.0-2.fc37.x86_64 fonts-srpm-macros-1:2.0.5-10.fc38.noarch fpc-srpm-macros-1.3-6.fc37.noarch gawk-5.1.1-4.fc37.x86_64 gdb-minimal-12.1-10.fc38.x86_64 gdbm-libs-1:1.23-2.fc37.x86_64 ghc-srpm-macros-1.5.0-7.fc37.noarch glibc-2.36.9000-19.fc38.x86_64 glibc-common-2.36.9000-19.fc38.x86_64 glibc-gconv-extra-2.36.9000-19.fc38.x86_64 glibc-minimal-langpack-2.36.9000-19.fc38.x86_64 gmp-1:6.2.1-3.fc37.x86_64 gnat-srpm-macros-4-16.fc37.noarch go-srpm-macros-3.2.0-1.fc38.noarch grep-3.8-1.fc38.x86_64 gzip-1.12-2.fc37.x86_64 info-7.0.1-1.fc38.x86_64 jansson-2.13.1-5.fc37.x86_64 kernel-srpm-macros-1.0-15.fc37.noarch keyutils-libs-1.6.1-5.fc37.x86_64 krb5-libs-1.20.1-3.fc38.x86_64 libacl-2.3.1-4.fc37.x86_64 libarchive-3.6.1-3.fc38.x86_64 libattr-2.5.1-5.fc37.x86_64 libblkid-2.38.1-3.fc38.x86_64 libbrotli-1.0.9-9.fc37.x86_64 libcap-2.48-5.fc37.x86_64 libcap-ng-0.8.3-4.fc38.x86_64 libcom_err-1.46.5-3.fc37.x86_64 libcurl-7.87.0-1.fc38.x86_64 libdb-5.3.28-54.fc38.x86_64 libeconf-0.4.0-4.fc37.x86_64 libevent-2.1.12-7.fc37.x86_64 libfdisk-2.38.1-3.fc38.x86_64 libffi-3.4.4-1.fc38.x86_64 libgcc-13.0.0-0.4.fc38.x86_64 libgomp-13.0.0-0.4.fc38.x86_64 libidn2-2.3.4-1.fc38.x86_64 libmount-2.38.1-3.fc38.x86_64 libnghttp2-1.51.0-1.fc38.x86_64 libnsl2-2.0.0-4.fc37.x86_64 libpkgconf-1.8.0-3.fc37.x86_64 libpsl-0.21.1-6.fc37.x86_64 libpwquality-1.4.5-1.fc38.x86_64 libselinux-3.4-6.fc38.x86_64 libsemanage-3.4-6.fc38.x86_64 libsepol-3.4-4.fc38.x86_64 libsigsegv-2.14-3.fc37.x86_64 libsmartcols-2.38.1-3.fc38.x86_64 libssh-0.10.4-2.fc38.x86_64 libssh-config-0.10.4-2.fc38.noarch libstdc++-13.0.0-0.4.fc38.x86_64 libtasn1-4.19.0-1.fc38.x86_64 libtirpc-1.3.3-0.fc37.x86_64 libunistring-1.0-2.fc37.x86_64 libutempter-1.2.1-7.fc37.x86_64 libuuid-2.38.1-3.fc38.x86_64 libverto-0.3.2-4.fc37.x86_64 libxcrypt-4.4.33-5.fc38.x86_64 libxml2-2.10.3-2.fc38.x86_64 libzstd-1.5.2-3.fc37.x86_64 lua-libs-5.4.4-6.fc38.x86_64 lua-srpm-macros-1-7.fc37.noarch lz4-libs-1.9.3-5.fc37.x86_64 mpfr-4.1.1-2.fc38.x86_64 ncurses-base-6.3-5.20221126.fc38.noarch ncurses-libs-6.3-5.20221126.fc38.x86_64 nettle-3.8-2.fc37.x86_64 nim-srpm-macros-3-7.fc37.noarch ocaml-srpm-macros-7-2.fc37.noarch openblas-srpm-macros-2-12.fc37.noarch openldap-2.6.3-1.fc38.x86_64 openssl-libs-1:3.0.5-6.fc38.x86_64 p11-kit-0.24.1-5.fc38.x86_64 p11-kit-trust-0.24.1-5.fc38.x86_64 package-notes-srpm-macros-0.5-6.fc38.noarch pam-1.5.2-15.fc38.x86_64 pam-libs-1.5.2-15.fc38.x86_64 patch-2.7.6-17.fc37.x86_64 pcre2-10.40-1.fc37.1.x86_64 pcre2-syntax-10.40-1.fc37.1.noarch perl-srpm-macros-1-47.fc38.noarch pkgconf-1.8.0-3.fc37.x86_64 pkgconf-m4-1.8.0-3.fc37.noarch pkgconf-pkg-config-1.8.0-3.fc37.x86_64 popt-1.19-1.fc38.x86_64 publicsuffix-list-dafsa-20221208-1.fc38.noarch python-srpm-macros-3.11-6.fc38.noarch qt5-srpm-macros-5.15.7-1.fc38.noarch readline-8.2-2.fc38.x86_64 redhat-rpm-config-235-1.fc38.noarch rpm-4.18.0-8.fc38.x86_64 rpm-build-4.18.0-8.fc38.x86_64 rpm-build-libs-4.18.0-8.fc38.x86_64 rpm-libs-4.18.0-8.fc38.x86_64 rpm-sequoia-1.2.0-1.fc38.x86_64 rpmautospec-rpm-macros-0.3.1-1.fc38.noarch rust-srpm-macros-23-1.fc38.noarch sed-4.8-11.fc37.x86_64 setup-2.14.3-1.fc38.noarch shadow-utils-2:4.13-3.fc38.x86_64 sqlite-libs-3.40.0-1.fc38.x86_64 systemd-libs-252.4-598.fc38.x86_64 tar-2:1.34-5.fc38.x86_64 tzdata-2022g-1.fc38.noarch unzip-6.0-58.fc38.x86_64 util-linux-2.38.1-3.fc38.x86_64 util-linux-core-2.38.1-3.fc38.x86_64 which-2.21-36.fc38.x86_64 xxhash-libs-0.8.1-3.fc37.x86_64 xz-5.2.9-1.fc38.x86_64 xz-libs-5.2.9-1.fc38.x86_64 zip-3.0-35.fc38.x86_64 zlib-1.2.13-1.fc38.x86_64 zstd-1.5.2-3.fc37.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: gnat-srpm-macros-4-16.fc37.noarch openblas-srpm-macros-2-12.fc37.noarch fonts-srpm-macros-2.0.5-10.fc38.noarch lua-libs-5.4.4-6.fc38.x86_64 libpkgconf-1.8.0-3.fc37.x86_64 ncurses-base-6.3-5.20221126.fc38.noarch libsmartcols-2.38.1-3.fc38.x86_64 libutempter-1.2.1-7.fc37.x86_64 authselect-1.4.2-1.fc38.x86_64 coreutils-common-9.1-8.fc38.x86_64 python-srpm-macros-3.11-6.fc38.noarch libpwquality-1.4.5-1.fc38.x86_64 fpc-srpm-macros-1.3-6.fc37.noarch keyutils-libs-1.6.1-5.fc37.x86_64 libdb-5.3.28-54.fc38.x86_64 ed-1.18-2.fc37.x86_64 readline-8.2-2.fc38.x86_64 setup-2.14.3-1.fc38.noarch grep-3.8-1.fc38.x86_64 util-linux-core-2.38.1-3.fc38.x86_64 mpfr-4.1.1-2.fc38.x86_64 elfutils-libs-0.188-3.fc38.x86_64 libgcc-13.0.0-0.4.fc38.x86_64 libfdisk-2.38.1-3.fc38.x86_64 tar-1.34-5.fc38.x86_64 libverto-0.3.2-4.fc37.x86_64 publicsuffix-list-dafsa-20221208-1.fc38.noarch libcom_err-1.46.5-3.fc37.x86_64 pam-libs-1.5.2-15.fc38.x86_64 rpm-build-libs-4.18.0-8.fc38.x86_64 elfutils-default-yama-scope-0.188-3.fc38.noarch fedora-repos-38-0.3.noarch p11-kit-0.24.1-5.fc38.x86_64 which-2.21-36.fc38.x86_64 libpsl-0.21.1-6.fc37.x86_64 libffi-3.4.4-1.fc38.x86_64 bash-5.2.9-3.fc38.x86_64 elfutils-0.188-3.fc38.x86_64 diffutils-3.8-3.fc37.x86_64 pcre2-10.40-1.fc37.1.x86_64 libmount-2.38.1-3.fc38.x86_64 go-srpm-macros-3.2.0-1.fc38.noarch redhat-rpm-config-235-1.fc38.noarch libcap-ng-0.8.3-4.fc38.x86_64 fedora-gpg-keys-38-0.3.noarch audit-libs-3.0.9-2.fc38.x86_64 libarchive-3.6.1-3.fc38.x86_64 gdb-minimal-12.1-10.fc38.x86_64 libacl-2.3.1-4.fc37.x86_64 cracklib-2.9.7-30.fc38.x86_64 glibc-2.36.9000-19.fc38.x86_64 xz-libs-5.2.9-1.fc38.x86_64 tzdata-2022g-1.fc38.noarch xz-5.2.9-1.fc38.x86_64 systemd-libs-252.4-598.fc38.x86_64 libidn2-2.3.4-1.fc38.x86_64 elfutils-libelf-0.188-3.fc38.x86_64 glibc-common-2.36.9000-19.fc38.x86_64 nim-srpm-macros-3-7.fc37.noarch popt-1.19-1.fc38.x86_64 openldap-2.6.3-1.fc38.x86_64 libssh-0.10.4-2.fc38.x86_64 curl-7.87.0-1.fc38.x86_64 pcre2-syntax-10.40-1.fc37.1.noarch libssh-config-0.10.4-2.fc38.noarch rpmautospec-rpm-macros-0.3.1-1.fc38.noarch efi-srpm-macros-5-6.fc37.noarch zip-3.0-35.fc38.x86_64 cpio-2.13-13.fc38.x86_64 ocaml-srpm-macros-7-2.fc37.noarch info-7.0.1-1.fc38.x86_64 patch-2.7.6-17.fc37.x86_64 fedora-release-common-38-0.6.noarch bzip2-libs-1.0.8-12.fc37.x86_64 libsemanage-3.4-6.fc38.x86_64 fedora-release-identity-basic-38-0.6.noarch libbrotli-1.0.9-9.fc37.x86_64 cyrus-sasl-lib-2.1.28-8.fc38.x86_64 sqlite-libs-3.40.0-1.fc38.x86_64 jansson-2.13.1-5.fc37.x86_64 pkgconf-m4-1.8.0-3.fc37.noarch fedora-repos-rawhide-38-0.3.noarch xxhash-libs-0.8.1-3.fc37.x86_64 util-linux-2.38.1-3.fc38.x86_64 rpm-4.18.0-8.fc38.x86_64 gdbm-libs-1.23-2.fc37.x86_64 libevent-2.1.12-7.fc37.x86_64 lua-srpm-macros-1-7.fc37.noarch libattr-2.5.1-5.fc37.x86_64 pkgconf-1.8.0-3.fc37.x86_64 ca-certificates-2022.2.54-5.fc37.noarch rpm-sequoia-1.2.0-1.fc38.x86_64 coreutils-9.1-8.fc38.x86_64 libxcrypt-4.4.33-5.fc38.x86_64 authselect-libs-1.4.2-1.fc38.x86_64 rust-srpm-macros-23-1.fc38.noarch dwz-0.15-1.fc38.x86_64 binutils-gold-2.39-6.fc38.x86_64 libcap-2.48-5.fc37.x86_64 nettle-3.8-2.fc37.x86_64 filesystem-3.18-2.fc37.x86_64 shadow-utils-4.13-3.fc38.x86_64 package-notes-srpm-macros-0.5-6.fc38.noarch zlib-1.2.13-1.fc38.x86_64 bzip2-1.0.8-12.fc37.x86_64 gpg-pubkey-5323552a-6112bcdc libsigsegv-2.14-3.fc37.x86_64 lz4-libs-1.9.3-5.fc37.x86_64 libcurl-7.87.0-1.fc38.x86_64 alternatives-1.21-1.fc38.x86_64 krb5-libs-1.20.1-3.fc38.x86_64 libuuid-2.38.1-3.fc38.x86_64 pam-1.5.2-15.fc38.x86_64 libxml2-2.10.3-2.fc38.x86_64 ncurses-libs-6.3-5.20221126.fc38.x86_64 openssl-libs-3.0.5-6.fc38.x86_64 perl-srpm-macros-1-47.fc38.noarch zstd-1.5.2-3.fc37.x86_64 libeconf-0.4.0-4.fc37.x86_64 libnghttp2-1.51.0-1.fc38.x86_64 libzstd-1.5.2-3.fc37.x86_64 rpm-libs-4.18.0-8.fc38.x86_64 libunistring-1.0-2.fc37.x86_64 crypto-policies-20221215-1.gita4c31a3.fc38.noarch gmp-6.2.1-3.fc37.x86_64 findutils-4.9.0-2.fc37.x86_64 pkgconf-pkg-config-1.8.0-3.fc37.x86_64 libnsl2-2.0.0-4.fc37.x86_64 libtasn1-4.19.0-1.fc38.x86_64 rpm-build-4.18.0-8.fc38.x86_64 gzip-1.12-2.fc37.x86_64 p11-kit-trust-0.24.1-5.fc38.x86_64 libstdc++-13.0.0-0.4.fc38.x86_64 basesystem-11-14.fc37.noarch file-libs-5.42-4.fc37.x86_64 libgomp-13.0.0-0.4.fc38.x86_64 debugedit-5.0-5.fc37.x86_64 unzip-6.0-58.fc38.x86_64 ansible-srpm-macros-1-8.1.fc38.noarch libselinux-3.4-6.fc38.x86_64 ghc-srpm-macros-1.5.0-7.fc37.noarch libtirpc-1.3.3-0.fc37.x86_64 fedora-release-38-0.6.noarch gpg-pubkey-eb10b464-6202d9c6 glibc-gconv-extra-2.36.9000-19.fc38.x86_64 glibc-minimal-langpack-2.36.9000-19.fc38.x86_64 libsepol-3.4-4.fc38.x86_64 gawk-5.1.1-4.fc37.x86_64 elfutils-debuginfod-client-0.188-3.fc38.x86_64 file-5.42-4.fc37.x86_64 binutils-2.39-6.fc38.x86_64 kernel-srpm-macros-1.0-15.fc37.noarch sed-4.8-11.fc37.x86_64 libblkid-2.38.1-3.fc38.x86_64 qt5-srpm-macros-5.15.7-1.fc38.noarch Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1668470400 Wrote: /builddir/build/SRPMS/ProDy-2.3.1-1.fc38.src.rpm Finish: rpmbuild -bs cp: ‘var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-cd10y4go/ProDy/ProDy.spec) Config(child) 1 minutes 12 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=115200): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/ProDy-2.3.1-1.fc38.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1672220725.289605 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/ProDy-2.3.1-1.fc38.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1672220725.289605/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1672220725.289605/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 12 kB/s | 3.0 kB 00:00 Additional repo https_jakub_fedorapeople_org_fe 10 kB/s | 3.0 kB 00:00 fedora 92 kB/s | 23 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for ProDy-2.3.1-1.fc38.src.rpm Start: build setup for ProDy-2.3.1-1.fc38.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1668470400 Wrote: /builddir/build/SRPMS/ProDy-2.3.1-1.fc38.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 12 kB/s | 3.0 kB 00:00 Additional repo https_jakub_fedorapeople_org_fe 9.6 kB/s | 3.0 kB 00:00 fedora 96 kB/s | 23 kB 00:00 Dependencies resolved. ==================================================================================================================================== Package Arch Version Repository Size ==================================================================================================================================== Installing: gcc x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 34 M gcc-c++ x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 13 M python3-biopython x86_64 1.80-3.fc38 fedora 3.6 M python3-devel x86_64 3.11.1-1.fc38 fedora 269 k python3-matplotlib x86_64 3.6.2-4.fc38 fedora 4.2 M python3-nose noarch 1.3.7-39.fc37 fedora 353 k python3-numpy x86_64 1:1.23.5-1.fc38 fedora 7.6 M python3-scipy x86_64 1.8.1-6.fc37 fedora 20 M python3-setuptools noarch 65.5.1-1.fc38 fedora 1.7 M python3-urllib3 noarch 1.26.12-1.fc38 fedora 253 k Installing dependencies: adobe-mappings-cmap noarch 20190730-4.fc37 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20190730-4.fc37 fedora 113 k adobe-mappings-pdf noarch 20190401-2.fc37 fedora 697 k annobin-docs noarch 10.99-1.0.1.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 93 k annobin-plugin-gcc x86_64 10.99-1.0.1.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 889 k avahi-libs x86_64 0.8-19.fc38 fedora 67 k cairo x86_64 1.17.6-2.fc37 fedora 676 k cairo-gobject x86_64 1.17.6-2.fc37 fedora 18 k cpp x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 11 M crypto-policies-scripts noarch 20221215-1.gita4c31a3.fc38 fedora 116 k cups-libs x86_64 1:2.4.2-5.fc38 fedora 268 k dbus-libs x86_64 1:1.14.4-1.fc38 fedora 156 k dejavu-sans-fonts noarch 2.37-19.fc37 fedora 1.3 M expat x86_64 2.5.0-1.fc38 fedora 110 k flex x86_64 2.6.4-11.fc37 fedora 313 k flexiblas x86_64 3.2.1-3.fc38 fedora 32 k flexiblas-netlib x86_64 3.2.1-3.fc38 fedora 3.1 M flexiblas-openblas-openmp x86_64 3.2.1-3.fc38 fedora 17 k fontconfig x86_64 2.14.1-2.fc38 fedora 294 k fonts-filesystem noarch 1:2.0.5-10.fc38 fedora 8.0 k freetype x86_64 2.12.1-3.fc37 fedora 407 k fribidi x86_64 1.0.12-2.fc37 fedora 89 k gc x86_64 8.2.2-1.fc38 fedora 110 k gcc-plugin-annobin x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 29 k gd x86_64 2.3.3-9.fc38 fedora 138 k gdk-pixbuf2 x86_64 2.42.10-1.fc38 fedora 485 k glib2 x86_64 2.74.1-2.fc38 fedora 2.7 M glibc-devel x86_64 2.36.9000-19.fc38 fedora 47 k glibc-headers-x86 noarch 2.36.9000-19.fc38 fedora 525 k gnutls x86_64 3.7.8-9.fc38 fedora 1.1 M google-droid-sans-fonts noarch 20200215-13.fc37 fedora 2.7 M google-noto-fonts-common noarch 20201206^1.git0c78c8329-9.fc38 fedora 18 k google-noto-sans-vf-fonts noarch 20201206^1.git0c78c8329-9.fc38 fedora 729 k graphite2 x86_64 1.3.14-10.fc37 fedora 95 k graphviz x86_64 7.0.4-1.fc38 fedora 5.0 M gts x86_64 0.7.6-43.20121130.fc38 fedora 241 k guile22 x86_64 2.2.7-6.fc37 fedora 6.5 M harfbuzz x86_64 6.0.0-1.fc38 fedora 819 k highway x86_64 1.0.1-2.fc38 fedora 439 k jbig2dec-libs x86_64 0.19-7.fc37 fedora 73 k jbigkit-libs x86_64 2.1-24.fc37 fedora 53 k kernel-headers x86_64 6.1.0-1.fc38 fedora 1.5 M langpacks-core-font-en noarch 3.0-27.fc38 fedora 9.9 k lasi x86_64 1.1.3-9.fc37 fedora 54 k lcms2 x86_64 2.14-1.fc38 fedora 176 k libX11 x86_64 1.8.1-2.fc38 fedora 648 k libX11-common noarch 1.8.1-2.fc38 fedora 182 k libXau x86_64 1.0.11-1.fc38 fedora 31 k libXext x86_64 1.3.5-1.fc38 fedora 39 k libXft x86_64 2.3.6-1.fc38 fedora 71 k libXpm x86_64 3.5.13-8.fc37 fedora 58 k libXrender x86_64 0.9.11-1.fc38 fedora 27 k libaom x86_64 3.5.0-2.fc38 fedora 1.8 M libart_lgpl x86_64 2.3.21-28.fc37 fedora 72 k libavif x86_64 0.11.1-4.fc38 fedora 83 k libb2 x86_64 0.98.1-7.fc37 fedora 25 k libdatrie x86_64 0.2.13-4.fc37 fedora 32 k libdav1d x86_64 1.0.0-2.fc37 fedora 584 k libfontenc x86_64 1.1.6-1.fc38 fedora 32 k libgfortran x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 890 k libgs x86_64 9.56.1-5.fc38 fedora 3.6 M libijs x86_64 0.35-16.fc37 fedora 29 k libimagequant x86_64 2.17.0-3.fc37 fedora 62 k libjpeg-turbo x86_64 2.1.4-1.fc38 fedora 181 k libjxl x86_64 1:0.7.0-3.fc38 fedora 1.1 M libmpc x86_64 1.2.1-5.fc37 fedora 61 k libpaper x86_64 1.1.28-5.fc37 fedora 46 k libpng x86_64 2:1.6.37-13.fc37 fedora 119 k libpq x86_64 15.0-2.fc38 fedora 210 k libqhull_r x86_64 1:7.2.1-11.fc38 fedora 168 k libquadmath x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 178 k libraqm x86_64 0.8.0-2.fc37 fedora 20 k librsvg2 x86_64 2.55.1-3.fc38 fedora 3.1 M libstdc++-devel x86_64 13.0.0-0.4.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 2.4 M libthai x86_64 0.1.29-3.fc37 fedora 213 k libtiff x86_64 4.4.0-4.fc37 fedora 197 k libtool-ltdl x86_64 2.4.7-3.0.1.fc38 https_jakub_fedorapeople_org_fedora_gcc13_arch 37 k libvmaf x86_64 2.3.0-4.fc37 fedora 180 k libwebp x86_64 1.2.4-2.fc38 fedora 278 k libxcb x86_64 1.13.1-10.fc37 fedora 231 k libxcrypt-devel x86_64 4.4.33-5.fc38 fedora 30 k libxslt x86_64 1.1.37-1.fc38 fedora 184 k m4 x86_64 1.4.19-4.fc37 fedora 303 k make x86_64 1:4.3-11.fc37 fedora 542 k mariadb-connector-c x86_64 3.2.7-2.fc37 fedora 196 k mariadb-connector-c-config noarch 3.2.7-2.fc37 fedora 9.6 k mkfontscale x86_64 1.2.2-2.fc37 fedora 32 k mpdecimal x86_64 2.5.1-4.fc37 fedora 102 k mysql-connector-python3 noarch 8.0.21-7.fc37 fedora 590 k netpbm x86_64 11.00.00-2.fc38 fedora 185 k nspr x86_64 4.35.0-2.fc38 fedora 136 k nss x86_64 3.85.0-1.fc38 fedora 693 k nss-softokn x86_64 3.85.0-1.fc38 fedora 1.0 M nss-softokn-freebl x86_64 3.85.0-1.fc38 fedora 324 k nss-sysinit x86_64 3.85.0-1.fc38 fedora 18 k nss-util x86_64 3.85.0-1.fc38 fedora 86 k openblas x86_64 0.3.21-4.fc38 fedora 35 k openblas-openmp x86_64 0.3.21-4.fc38 fedora 5.1 M openjpeg2 x86_64 2.5.0-2.fc37 fedora 178 k pango x86_64 1.50.12-1.fc38 fedora 342 k pixman x86_64 0.40.0-6.fc37 fedora 277 k poppler x86_64 22.08.0-4.fc38 fedora 1.2 M poppler-data noarch 0.4.11-3.fc37 fedora 2.0 M poppler-glib x86_64 22.08.0-4.fc38 fedora 176 k protobuf x86_64 3.19.6-1.fc38 fedora 984 k pyproject-rpm-macros noarch 1.5.0-1.fc38 fedora 40 k python-pip-wheel noarch 22.3.1-1.fc38 fedora 1.4 M python-rpm-macros noarch 3.11-6.fc38 fedora 19 k python-setuptools-wheel noarch 65.5.1-1.fc38 fedora 715 k python3 x86_64 3.11.1-1.fc38 fedora 27 k python3-appdirs noarch 1.4.4-7.fc37 fedora 24 k python3-brotli x86_64 1.0.9-9.fc37 fedora 319 k python3-cairo x86_64 1.23.0-1.fc38 fedora 125 k python3-contourpy x86_64 1.0.6-1.fc38 fedora 227 k python3-cycler noarch 0.11.0-6.fc37 fedora 21 k python3-dateutil noarch 1:2.8.2-4.fc37 fedora 361 k python3-fonttools x86_64 4.38.0-1.fc38 fedora 2.5 M python3-fs noarch 2.4.11-12.fc37 fedora 294 k python3-idna noarch 3.4-1.fc38 fedora 110 k python3-isodate noarch 0.6.1-5.fc37 fedora 79 k python3-kiwisolver x86_64 1.4.4-1.fc37 fedora 65 k python3-libs x86_64 3.11.1-1.fc38 fedora 9.6 M python3-lxml x86_64 4.9.1-1.fc38 fedora 1.2 M python3-matplotlib-data noarch 3.6.2-4.fc38 fedora 543 k python3-matplotlib-data-fonts noarch 3.6.2-4.fc38 fedora 2.3 M python3-matplotlib-tk x86_64 3.6.2-4.fc38 fedora 53 k python3-munkres noarch 1.1.2-13.fc37 fedora 26 k python3-mysqlclient x86_64 2.1.1-2.fc38 fedora 106 k python3-networkx noarch 2.8.8-1.fc38 fedora 3.5 M python3-numpy-f2py x86_64 1:1.23.5-1.fc38 fedora 469 k python3-olefile noarch 0.46-18.fc37 fedora 67 k python3-packaging noarch 21.3-7.fc38 fedora 98 k python3-pillow x86_64 9.3.0-2.fc38 fedora 921 k python3-pillow-tk x86_64 9.3.0-2.fc38 fedora 30 k python3-protobuf x86_64 3.19.6-1.fc38 fedora 420 k python3-psycopg2 x86_64 2.9.3-6.fc37 fedora 208 k python3-pygraphviz x86_64 1.10-1.fc38 fedora 160 k python3-pyparsing noarch 3.0.9-2.fc37 fedora 262 k python3-pysocks noarch 1.7.1-15.fc37 fedora 40 k python3-pytz noarch 2022.7-1.fc38 fedora 65 k python3-rdflib noarch 6.2.0-1.fc38 fedora 965 k python3-reportlab x86_64 3.6.12-1.fc38 fedora 3.5 M python3-rpm-generators noarch 13-2.fc37 fedora 30 k python3-rpm-macros noarch 3.11-6.fc38 fedora 15 k python3-six noarch 1.16.0-8.fc37 fedora 42 k python3-tkinter x86_64 3.11.1-1.fc38 fedora 417 k rav1e-libs x86_64 0.5.1-5.fc37 fedora 910 k shared-mime-info x86_64 2.2-2.fc37 fedora 381 k svt-av1-libs x86_64 1.3.0-1.fc38 fedora 2.1 M tcl x86_64 1:8.6.12-3.fc38 fedora 1.1 M tk x86_64 1:8.6.12-3.fc37 fedora 1.6 M urw-base35-bookman-fonts noarch 20200910-15.fc37 fedora 848 k urw-base35-c059-fonts noarch 20200910-15.fc37 fedora 875 k urw-base35-d050000l-fonts noarch 20200910-15.fc37 fedora 76 k urw-base35-fonts noarch 20200910-15.fc37 fedora 11 k urw-base35-fonts-common noarch 20200910-15.fc37 fedora 21 k urw-base35-gothic-fonts noarch 20200910-15.fc37 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-15.fc37 fedora 796 k urw-base35-nimbus-roman-fonts noarch 20200910-15.fc37 fedora 857 k urw-base35-nimbus-sans-fonts noarch 20200910-15.fc37 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-15.fc37 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-15.fc37 fedora 42 k urw-base35-z003-fonts noarch 20200910-15.fc37 fedora 276 k wise2 x86_64 2.4.1-16.fc38 fedora 973 k xml-common noarch 0.6.3-59.fc37 fedora 31 k xorg-x11-fonts-ISO8859-1-100dpi noarch 7.5-34.fc37 fedora 1.1 M Transaction Summary ==================================================================================================================================== Install 176 Packages Total download size: 207 M Installed size: 794 M Downloading Packages: (1/176): annobin-docs-10.99-1.0.1.fc38.noarch.r 273 kB/s | 93 kB 00:00 (2/176): annobin-plugin-gcc-10.99-1.0.1.fc38.x8 2.3 MB/s | 889 kB 00:00 (3/176): gcc-c++-13.0.0-0.4.fc38.x86_64.rpm 27 MB/s | 13 MB 00:00 (4/176): gcc-plugin-annobin-13.0.0-0.4.fc38.x86 860 kB/s | 29 kB 00:00 (5/176): libgfortran-13.0.0-0.4.fc38.x86_64.rpm 19 MB/s | 890 kB 00:00 (6/176): libquadmath-13.0.0-0.4.fc38.x86_64.rpm 4.7 MB/s | 178 kB 00:00 (7/176): cpp-13.0.0-0.4.fc38.x86_64.rpm 11 MB/s | 11 MB 00:01 (8/176): libtool-ltdl-2.4.7-3.0.1.fc38.x86_64.r 836 kB/s | 37 kB 00:00 (9/176): libstdc++-devel-13.0.0-0.4.fc38.x86_64 22 MB/s | 2.4 MB 00:00 (10/176): adobe-mappings-cmap-deprecated-201907 1.0 MB/s | 113 kB 00:00 (11/176): adobe-mappings-pdf-20190401-2.fc37.no 8.1 MB/s | 697 kB 00:00 (12/176): adobe-mappings-cmap-20190730-4.fc37.n 9.1 MB/s | 2.1 MB 00:00 (13/176): avahi-libs-0.8-19.fc38.x86_64.rpm 3.0 MB/s | 67 kB 00:00 (14/176): cairo-1.17.6-2.fc37.x86_64.rpm 23 MB/s | 676 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python3-cycler-0.11.0-6.fc37.noarch. 686 kB/s | 21 kB 00:00 (118/176): python3-dateutil-2.8.2-4.fc37.noarch 15 MB/s | 361 kB 00:00 (119/176): python3-devel-3.11.1-1.fc38.x86_64.r 7.6 MB/s | 269 kB 00:00 (120/176): python3-biopython-1.80-3.fc38.x86_64 22 MB/s | 3.6 MB 00:00 (121/176): python3-fonttools-4.38.0-1.fc38.x86_ 40 MB/s | 2.5 MB 00:00 (122/176): python3-fs-2.4.11-12.fc37.noarch.rpm 5.6 MB/s | 294 kB 00:00 (123/176): python3-idna-3.4-1.fc38.noarch.rpm 3.2 MB/s | 110 kB 00:00 (124/176): python3-isodate-0.6.1-5.fc37.noarch. 2.8 MB/s | 79 kB 00:00 (125/176): python3-kiwisolver-1.4.4-1.fc37.x86_ 2.1 MB/s | 65 kB 00:00 (126/176): python3-lxml-4.9.1-1.fc38.x86_64.rpm 27 MB/s | 1.2 MB 00:00 (127/176): python3-matplotlib-data-3.6.2-4.fc38 14 MB/s | 543 kB 00:00 (128/176): python3-matplotlib-data-fonts-3.6.2- 18 MB/s | 2.3 MB 00:00 (129/176): python3-matplotlib-3.6.2-4.fc38.x86_ 18 MB/s | 4.2 MB 00:00 (130/176): python3-libs-3.11.1-1.fc38.x86_64.rp 36 MB/s | 9.6 MB 00:00 (131/176): 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tcl-8.6.12-3.fc38.x86_64.rpm 12 MB/s | 1.1 MB 00:00 (160/176): urw-base35-bookman-fonts-20200910-15 17 MB/s | 848 kB 00:00 (161/176): tk-8.6.12-3.fc37.x86_64.rpm 19 MB/s | 1.6 MB 00:00 (162/176): urw-base35-d050000l-fonts-20200910-1 2.9 MB/s | 76 kB 00:00 (163/176): urw-base35-fonts-20200910-15.fc37.no 419 kB/s | 11 kB 00:00 (164/176): urw-base35-c059-fonts-20200910-15.fc 8.1 MB/s | 875 kB 00:00 (165/176): urw-base35-fonts-common-20200910-15. 602 kB/s | 21 kB 00:00 (166/176): urw-base35-gothic-fonts-20200910-15. 5.9 MB/s | 643 kB 00:00 (167/176): urw-base35-nimbus-mono-ps-fonts-2020 7.8 MB/s | 796 kB 00:00 (168/176): urw-base35-nimbus-sans-fonts-2020091 11 MB/s | 1.3 MB 00:00 (169/176): urw-base35-nimbus-roman-fonts-202009 6.1 MB/s | 857 kB 00:00 (170/176): python3-scipy-1.8.1-6.fc37.x86_64.rp 26 MB/s | 20 MB 00:00 (171/176): urw-base35-p052-fonts-20200910-15.fc 9.9 MB/s | 974 kB 00:00 (172/176): urw-base35-standard-symbols-ps-fonts 498 kB/s | 42 kB 00:00 (173/176): xml-common-0.6.3-59.fc37.noarch.rpm 1.3 MB/s | 31 kB 00:00 (174/176): urw-base35-z003-fonts-20200910-15.fc 9.8 MB/s | 276 kB 00:00 (175/176): wise2-2.4.1-16.fc38.x86_64.rpm 9.5 MB/s | 973 kB 00:00 (176/176): xorg-x11-fonts-ISO8859-1-100dpi-7.5- 11 MB/s | 1.1 MB 00:00 -------------------------------------------------------------------------------- Total 43 MB/s | 207 MB 00:04 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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glibc-headers-x86-2.36.9000-19.fc38.noarch 35/176 Verifying : gnutls-3.7.8-9.fc38.x86_64 36/176 Verifying : google-droid-sans-fonts-20200215-13.fc37.noarch 37/176 Verifying : google-noto-fonts-common-20201206^1.git0c78c8329 38/176 Verifying : google-noto-sans-vf-fonts-20201206^1.git0c78c832 39/176 Verifying : graphite2-1.3.14-10.fc37.x86_64 40/176 Verifying : graphviz-7.0.4-1.fc38.x86_64 41/176 Verifying : gts-0.7.6-43.20121130.fc38.x86_64 42/176 Verifying : guile22-2.2.7-6.fc37.x86_64 43/176 Verifying : harfbuzz-6.0.0-1.fc38.x86_64 44/176 Verifying : highway-1.0.1-2.fc38.x86_64 45/176 Verifying : jbig2dec-libs-0.19-7.fc37.x86_64 46/176 Verifying : jbigkit-libs-2.1-24.fc37.x86_64 47/176 Verifying : kernel-headers-6.1.0-1.fc38.x86_64 48/176 Verifying : langpacks-core-font-en-3.0-27.fc38.noarch 49/176 Verifying : lasi-1.1.3-9.fc37.x86_64 50/176 Verifying : lcms2-2.14-1.fc38.x86_64 51/176 Verifying : libX11-1.8.1-2.fc38.x86_64 52/176 Verifying : libX11-common-1.8.1-2.fc38.noarch 53/176 Verifying : libXau-1.0.11-1.fc38.x86_64 54/176 Verifying : libXext-1.3.5-1.fc38.x86_64 55/176 Verifying : libXft-2.3.6-1.fc38.x86_64 56/176 Verifying : libXpm-3.5.13-8.fc37.x86_64 57/176 Verifying : libXrender-0.9.11-1.fc38.x86_64 58/176 Verifying : libaom-3.5.0-2.fc38.x86_64 59/176 Verifying : libart_lgpl-2.3.21-28.fc37.x86_64 60/176 Verifying : libavif-0.11.1-4.fc38.x86_64 61/176 Verifying : libb2-0.98.1-7.fc37.x86_64 62/176 Verifying : libdatrie-0.2.13-4.fc37.x86_64 63/176 Verifying : libdav1d-1.0.0-2.fc37.x86_64 64/176 Verifying : libfontenc-1.1.6-1.fc38.x86_64 65/176 Verifying : libgs-9.56.1-5.fc38.x86_64 66/176 Verifying : libijs-0.35-16.fc37.x86_64 67/176 Verifying : libimagequant-2.17.0-3.fc37.x86_64 68/176 Verifying : libjpeg-turbo-2.1.4-1.fc38.x86_64 69/176 Verifying : libjxl-1:0.7.0-3.fc38.x86_64 70/176 Verifying : libmpc-1.2.1-5.fc37.x86_64 71/176 Verifying : libpaper-1.1.28-5.fc37.x86_64 72/176 Verifying : libpng-2:1.6.37-13.fc37.x86_64 73/176 Verifying : libpq-15.0-2.fc38.x86_64 74/176 Verifying : libqhull_r-1:7.2.1-11.fc38.x86_64 75/176 Verifying : libraqm-0.8.0-2.fc37.x86_64 76/176 Verifying : librsvg2-2.55.1-3.fc38.x86_64 77/176 Verifying : libthai-0.1.29-3.fc37.x86_64 78/176 Verifying : libtiff-4.4.0-4.fc37.x86_64 79/176 Verifying : libvmaf-2.3.0-4.fc37.x86_64 80/176 Verifying : libwebp-1.2.4-2.fc38.x86_64 81/176 Verifying : libxcb-1.13.1-10.fc37.x86_64 82/176 Verifying : libxcrypt-devel-4.4.33-5.fc38.x86_64 83/176 Verifying : libxslt-1.1.37-1.fc38.x86_64 84/176 Verifying : m4-1.4.19-4.fc37.x86_64 85/176 Verifying : make-1:4.3-11.fc37.x86_64 86/176 Verifying : mariadb-connector-c-3.2.7-2.fc37.x86_64 87/176 Verifying : mariadb-connector-c-config-3.2.7-2.fc37.noarch 88/176 Verifying : mkfontscale-1.2.2-2.fc37.x86_64 89/176 Verifying : mpdecimal-2.5.1-4.fc37.x86_64 90/176 Verifying : mysql-connector-python3-8.0.21-7.fc37.noarch 91/176 Verifying : netpbm-11.00.00-2.fc38.x86_64 92/176 Verifying : nspr-4.35.0-2.fc38.x86_64 93/176 Verifying : nss-3.85.0-1.fc38.x86_64 94/176 Verifying : nss-softokn-3.85.0-1.fc38.x86_64 95/176 Verifying : nss-softokn-freebl-3.85.0-1.fc38.x86_64 96/176 Verifying : nss-sysinit-3.85.0-1.fc38.x86_64 97/176 Verifying : nss-util-3.85.0-1.fc38.x86_64 98/176 Verifying : openblas-0.3.21-4.fc38.x86_64 99/176 Verifying : openblas-openmp-0.3.21-4.fc38.x86_64 100/176 Verifying : openjpeg2-2.5.0-2.fc37.x86_64 101/176 Verifying : pango-1.50.12-1.fc38.x86_64 102/176 Verifying : pixman-0.40.0-6.fc37.x86_64 103/176 Verifying : poppler-22.08.0-4.fc38.x86_64 104/176 Verifying : poppler-data-0.4.11-3.fc37.noarch 105/176 Verifying : poppler-glib-22.08.0-4.fc38.x86_64 106/176 Verifying : protobuf-3.19.6-1.fc38.x86_64 107/176 Verifying : pyproject-rpm-macros-1.5.0-1.fc38.noarch 108/176 Verifying : python-pip-wheel-22.3.1-1.fc38.noarch 109/176 Verifying : python-rpm-macros-3.11-6.fc38.noarch 110/176 Verifying : python-setuptools-wheel-65.5.1-1.fc38.noarch 111/176 Verifying : python3-3.11.1-1.fc38.x86_64 112/176 Verifying : python3-appdirs-1.4.4-7.fc37.noarch 113/176 Verifying : python3-biopython-1.80-3.fc38.x86_64 114/176 Verifying : python3-brotli-1.0.9-9.fc37.x86_64 115/176 Verifying : python3-cairo-1.23.0-1.fc38.x86_64 116/176 Verifying : python3-contourpy-1.0.6-1.fc38.x86_64 117/176 Verifying : python3-cycler-0.11.0-6.fc37.noarch 118/176 Verifying : python3-dateutil-1:2.8.2-4.fc37.noarch 119/176 Verifying : python3-devel-3.11.1-1.fc38.x86_64 120/176 Verifying : python3-fonttools-4.38.0-1.fc38.x86_64 121/176 Verifying : python3-fs-2.4.11-12.fc37.noarch 122/176 Verifying : python3-idna-3.4-1.fc38.noarch 123/176 Verifying : python3-isodate-0.6.1-5.fc37.noarch 124/176 Verifying : python3-kiwisolver-1.4.4-1.fc37.x86_64 125/176 Verifying : python3-libs-3.11.1-1.fc38.x86_64 126/176 Verifying : python3-lxml-4.9.1-1.fc38.x86_64 127/176 Verifying : python3-matplotlib-3.6.2-4.fc38.x86_64 128/176 Verifying : python3-matplotlib-data-3.6.2-4.fc38.noarch 129/176 Verifying : python3-matplotlib-data-fonts-3.6.2-4.fc38.noarc 130/176 Verifying : python3-matplotlib-tk-3.6.2-4.fc38.x86_64 131/176 Verifying : python3-munkres-1.1.2-13.fc37.noarch 132/176 Verifying : python3-mysqlclient-2.1.1-2.fc38.x86_64 133/176 Verifying : python3-networkx-2.8.8-1.fc38.noarch 134/176 Verifying : python3-nose-1.3.7-39.fc37.noarch 135/176 Verifying : python3-numpy-1:1.23.5-1.fc38.x86_64 136/176 Verifying : python3-numpy-f2py-1:1.23.5-1.fc38.x86_64 137/176 Verifying : python3-olefile-0.46-18.fc37.noarch 138/176 Verifying : python3-packaging-21.3-7.fc38.noarch 139/176 Verifying : python3-pillow-9.3.0-2.fc38.x86_64 140/176 Verifying : python3-pillow-tk-9.3.0-2.fc38.x86_64 141/176 Verifying : python3-protobuf-3.19.6-1.fc38.x86_64 142/176 Verifying : python3-psycopg2-2.9.3-6.fc37.x86_64 143/176 Verifying : python3-pygraphviz-1.10-1.fc38.x86_64 144/176 Verifying : python3-pyparsing-3.0.9-2.fc37.noarch 145/176 Verifying : python3-pysocks-1.7.1-15.fc37.noarch 146/176 Verifying : python3-pytz-2022.7-1.fc38.noarch 147/176 Verifying : python3-rdflib-6.2.0-1.fc38.noarch 148/176 Verifying : python3-reportlab-3.6.12-1.fc38.x86_64 149/176 Verifying : python3-rpm-generators-13-2.fc37.noarch 150/176 Verifying : python3-rpm-macros-3.11-6.fc38.noarch 151/176 Verifying : python3-scipy-1.8.1-6.fc37.x86_64 152/176 Verifying : python3-setuptools-65.5.1-1.fc38.noarch 153/176 Verifying : python3-six-1.16.0-8.fc37.noarch 154/176 Verifying : python3-tkinter-3.11.1-1.fc38.x86_64 155/176 Verifying : python3-urllib3-1.26.12-1.fc38.noarch 156/176 Verifying : rav1e-libs-0.5.1-5.fc37.x86_64 157/176 Verifying : shared-mime-info-2.2-2.fc37.x86_64 158/176 Verifying : svt-av1-libs-1.3.0-1.fc38.x86_64 159/176 Verifying : tcl-1:8.6.12-3.fc38.x86_64 160/176 Verifying : tk-1:8.6.12-3.fc37.x86_64 161/176 Verifying : urw-base35-bookman-fonts-20200910-15.fc37.noarch 162/176 Verifying : urw-base35-c059-fonts-20200910-15.fc37.noarch 163/176 Verifying : urw-base35-d050000l-fonts-20200910-15.fc37.noarc 164/176 Verifying : urw-base35-fonts-20200910-15.fc37.noarch 165/176 Verifying : urw-base35-fonts-common-20200910-15.fc37.noarch 166/176 Verifying : urw-base35-gothic-fonts-20200910-15.fc37.noarch 167/176 Verifying : urw-base35-nimbus-mono-ps-fonts-20200910-15.fc37 168/176 Verifying : urw-base35-nimbus-roman-fonts-20200910-15.fc37.n 169/176 Verifying : urw-base35-nimbus-sans-fonts-20200910-15.fc37.no 170/176 Verifying : urw-base35-p052-fonts-20200910-15.fc37.noarch 171/176 Verifying : urw-base35-standard-symbols-ps-fonts-20200910-15 172/176 Verifying : urw-base35-z003-fonts-20200910-15.fc37.noarch 173/176 Verifying : wise2-2.4.1-16.fc38.x86_64 174/176 Verifying : xml-common-0.6.3-59.fc37.noarch 175/176 Verifying : xorg-x11-fonts-ISO8859-1-100dpi-7.5-34.fc37.noar 176/176 Installed: adobe-mappings-cmap-20190730-4.fc37.noarch adobe-mappings-cmap-deprecated-20190730-4.fc37.noarch adobe-mappings-pdf-20190401-2.fc37.noarch annobin-docs-10.99-1.0.1.fc38.noarch annobin-plugin-gcc-10.99-1.0.1.fc38.x86_64 avahi-libs-0.8-19.fc38.x86_64 cairo-1.17.6-2.fc37.x86_64 cairo-gobject-1.17.6-2.fc37.x86_64 cpp-13.0.0-0.4.fc38.x86_64 crypto-policies-scripts-20221215-1.gita4c31a3.fc38.noarch cups-libs-1:2.4.2-5.fc38.x86_64 dbus-libs-1:1.14.4-1.fc38.x86_64 dejavu-sans-fonts-2.37-19.fc37.noarch expat-2.5.0-1.fc38.x86_64 flex-2.6.4-11.fc37.x86_64 flexiblas-3.2.1-3.fc38.x86_64 flexiblas-netlib-3.2.1-3.fc38.x86_64 flexiblas-openblas-openmp-3.2.1-3.fc38.x86_64 fontconfig-2.14.1-2.fc38.x86_64 fonts-filesystem-1:2.0.5-10.fc38.noarch freetype-2.12.1-3.fc37.x86_64 fribidi-1.0.12-2.fc37.x86_64 gc-8.2.2-1.fc38.x86_64 gcc-13.0.0-0.4.fc38.x86_64 gcc-c++-13.0.0-0.4.fc38.x86_64 gcc-plugin-annobin-13.0.0-0.4.fc38.x86_64 gd-2.3.3-9.fc38.x86_64 gdk-pixbuf2-2.42.10-1.fc38.x86_64 glib2-2.74.1-2.fc38.x86_64 glibc-devel-2.36.9000-19.fc38.x86_64 glibc-headers-x86-2.36.9000-19.fc38.noarch gnutls-3.7.8-9.fc38.x86_64 google-droid-sans-fonts-20200215-13.fc37.noarch google-noto-fonts-common-20201206^1.git0c78c8329-9.fc38.noarch google-noto-sans-vf-fonts-20201206^1.git0c78c8329-9.fc38.noarch graphite2-1.3.14-10.fc37.x86_64 graphviz-7.0.4-1.fc38.x86_64 gts-0.7.6-43.20121130.fc38.x86_64 guile22-2.2.7-6.fc37.x86_64 harfbuzz-6.0.0-1.fc38.x86_64 highway-1.0.1-2.fc38.x86_64 jbig2dec-libs-0.19-7.fc37.x86_64 jbigkit-libs-2.1-24.fc37.x86_64 kernel-headers-6.1.0-1.fc38.x86_64 langpacks-core-font-en-3.0-27.fc38.noarch lasi-1.1.3-9.fc37.x86_64 lcms2-2.14-1.fc38.x86_64 libX11-1.8.1-2.fc38.x86_64 libX11-common-1.8.1-2.fc38.noarch libXau-1.0.11-1.fc38.x86_64 libXext-1.3.5-1.fc38.x86_64 libXft-2.3.6-1.fc38.x86_64 libXpm-3.5.13-8.fc37.x86_64 libXrender-0.9.11-1.fc38.x86_64 libaom-3.5.0-2.fc38.x86_64 libart_lgpl-2.3.21-28.fc37.x86_64 libavif-0.11.1-4.fc38.x86_64 libb2-0.98.1-7.fc37.x86_64 libdatrie-0.2.13-4.fc37.x86_64 libdav1d-1.0.0-2.fc37.x86_64 libfontenc-1.1.6-1.fc38.x86_64 libgfortran-13.0.0-0.4.fc38.x86_64 libgs-9.56.1-5.fc38.x86_64 libijs-0.35-16.fc37.x86_64 libimagequant-2.17.0-3.fc37.x86_64 libjpeg-turbo-2.1.4-1.fc38.x86_64 libjxl-1:0.7.0-3.fc38.x86_64 libmpc-1.2.1-5.fc37.x86_64 libpaper-1.1.28-5.fc37.x86_64 libpng-2:1.6.37-13.fc37.x86_64 libpq-15.0-2.fc38.x86_64 libqhull_r-1:7.2.1-11.fc38.x86_64 libquadmath-13.0.0-0.4.fc38.x86_64 libraqm-0.8.0-2.fc37.x86_64 librsvg2-2.55.1-3.fc38.x86_64 libstdc++-devel-13.0.0-0.4.fc38.x86_64 libthai-0.1.29-3.fc37.x86_64 libtiff-4.4.0-4.fc37.x86_64 libtool-ltdl-2.4.7-3.0.1.fc38.x86_64 libvmaf-2.3.0-4.fc37.x86_64 libwebp-1.2.4-2.fc38.x86_64 libxcb-1.13.1-10.fc37.x86_64 libxcrypt-devel-4.4.33-5.fc38.x86_64 libxslt-1.1.37-1.fc38.x86_64 m4-1.4.19-4.fc37.x86_64 make-1:4.3-11.fc37.x86_64 mariadb-connector-c-3.2.7-2.fc37.x86_64 mariadb-connector-c-config-3.2.7-2.fc37.noarch mkfontscale-1.2.2-2.fc37.x86_64 mpdecimal-2.5.1-4.fc37.x86_64 mysql-connector-python3-8.0.21-7.fc37.noarch netpbm-11.00.00-2.fc38.x86_64 nspr-4.35.0-2.fc38.x86_64 nss-3.85.0-1.fc38.x86_64 nss-softokn-3.85.0-1.fc38.x86_64 nss-softokn-freebl-3.85.0-1.fc38.x86_64 nss-sysinit-3.85.0-1.fc38.x86_64 nss-util-3.85.0-1.fc38.x86_64 openblas-0.3.21-4.fc38.x86_64 openblas-openmp-0.3.21-4.fc38.x86_64 openjpeg2-2.5.0-2.fc37.x86_64 pango-1.50.12-1.fc38.x86_64 pixman-0.40.0-6.fc37.x86_64 poppler-22.08.0-4.fc38.x86_64 poppler-data-0.4.11-3.fc37.noarch poppler-glib-22.08.0-4.fc38.x86_64 protobuf-3.19.6-1.fc38.x86_64 pyproject-rpm-macros-1.5.0-1.fc38.noarch python-pip-wheel-22.3.1-1.fc38.noarch python-rpm-macros-3.11-6.fc38.noarch python-setuptools-wheel-65.5.1-1.fc38.noarch python3-3.11.1-1.fc38.x86_64 python3-appdirs-1.4.4-7.fc37.noarch python3-biopython-1.80-3.fc38.x86_64 python3-brotli-1.0.9-9.fc37.x86_64 python3-cairo-1.23.0-1.fc38.x86_64 python3-contourpy-1.0.6-1.fc38.x86_64 python3-cycler-0.11.0-6.fc37.noarch python3-dateutil-1:2.8.2-4.fc37.noarch python3-devel-3.11.1-1.fc38.x86_64 python3-fonttools-4.38.0-1.fc38.x86_64 python3-fs-2.4.11-12.fc37.noarch python3-idna-3.4-1.fc38.noarch python3-isodate-0.6.1-5.fc37.noarch python3-kiwisolver-1.4.4-1.fc37.x86_64 python3-libs-3.11.1-1.fc38.x86_64 python3-lxml-4.9.1-1.fc38.x86_64 python3-matplotlib-3.6.2-4.fc38.x86_64 python3-matplotlib-data-3.6.2-4.fc38.noarch python3-matplotlib-data-fonts-3.6.2-4.fc38.noarch python3-matplotlib-tk-3.6.2-4.fc38.x86_64 python3-munkres-1.1.2-13.fc37.noarch python3-mysqlclient-2.1.1-2.fc38.x86_64 python3-networkx-2.8.8-1.fc38.noarch python3-nose-1.3.7-39.fc37.noarch python3-numpy-1:1.23.5-1.fc38.x86_64 python3-numpy-f2py-1:1.23.5-1.fc38.x86_64 python3-olefile-0.46-18.fc37.noarch python3-packaging-21.3-7.fc38.noarch python3-pillow-9.3.0-2.fc38.x86_64 python3-pillow-tk-9.3.0-2.fc38.x86_64 python3-protobuf-3.19.6-1.fc38.x86_64 python3-psycopg2-2.9.3-6.fc37.x86_64 python3-pygraphviz-1.10-1.fc38.x86_64 python3-pyparsing-3.0.9-2.fc37.noarch python3-pysocks-1.7.1-15.fc37.noarch python3-pytz-2022.7-1.fc38.noarch python3-rdflib-6.2.0-1.fc38.noarch python3-reportlab-3.6.12-1.fc38.x86_64 python3-rpm-generators-13-2.fc37.noarch python3-rpm-macros-3.11-6.fc38.noarch python3-scipy-1.8.1-6.fc37.x86_64 python3-setuptools-65.5.1-1.fc38.noarch python3-six-1.16.0-8.fc37.noarch python3-tkinter-3.11.1-1.fc38.x86_64 python3-urllib3-1.26.12-1.fc38.noarch rav1e-libs-0.5.1-5.fc37.x86_64 shared-mime-info-2.2-2.fc37.x86_64 svt-av1-libs-1.3.0-1.fc38.x86_64 tcl-1:8.6.12-3.fc38.x86_64 tk-1:8.6.12-3.fc37.x86_64 urw-base35-bookman-fonts-20200910-15.fc37.noarch urw-base35-c059-fonts-20200910-15.fc37.noarch urw-base35-d050000l-fonts-20200910-15.fc37.noarch urw-base35-fonts-20200910-15.fc37.noarch urw-base35-fonts-common-20200910-15.fc37.noarch urw-base35-gothic-fonts-20200910-15.fc37.noarch urw-base35-nimbus-mono-ps-fonts-20200910-15.fc37.noarch urw-base35-nimbus-roman-fonts-20200910-15.fc37.noarch urw-base35-nimbus-sans-fonts-20200910-15.fc37.noarch urw-base35-p052-fonts-20200910-15.fc37.noarch urw-base35-standard-symbols-ps-fonts-20200910-15.fc37.noarch urw-base35-z003-fonts-20200910-15.fc37.noarch wise2-2.4.1-16.fc38.x86_64 xml-common-0.6.3-59.fc37.noarch xorg-x11-fonts-ISO8859-1-100dpi-7.5-34.fc37.noarch Complete! Finish: build setup for ProDy-2.3.1-1.fc38.src.rpm Start: rpmbuild ProDy-2.3.1-1.fc38.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1668470400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.fKfHCr + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf ProDy-2.3.1 + /usr/bin/mkdir -p ProDy-2.3.1 + cd ProDy-2.3.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/ProDy-2.3.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find ProDy-2.3.1/prody/proteins/ccealign -name '*.h' -exec chmod 0644 '{}' ';' + find ProDy-2.3.1/prody/proteins/ccealign -name '*.cpp' -exec chmod 0644 '{}' ';' + mv ProDy-2.3.1 python3 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.3B6BXy + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS ~/build/BUILD/ProDy-2.3.1/python3 ~/build/BUILD/ProDy-2.3.1 + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.3.1 + pushd python3 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' running build running build_py creating build creating build/lib.linux-x86_64-cpython-311 creating build/lib.linux-x86_64-cpython-311/prody copying prody/__init__.py -> build/lib.linux-x86_64-cpython-311/prody creating build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/subset.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/selection.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/select.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/segment.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/residue.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/pointer.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/nbexclusion.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/improper.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/hierview.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/functions.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/flags.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/fields.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/donor.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/dihedral.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/crossterm.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/chain.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/bond.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atommap.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atomic.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atomgroup.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/atom.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/angle.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/acceptor.py -> build/lib.linux-x86_64-cpython-311/prody/atomic copying prody/atomic/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/atomic creating build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/uniprot.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/quartataweb.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/pfam.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/goa.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/dali.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/cath.py -> build/lib.linux-x86_64-cpython-311/prody/database copying prody/database/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/database creating build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/vmdfile.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/signature.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/sampling.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/rtb.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/plotting.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/perturb.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/pca.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/nmdfile.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/nma.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/modeset.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/mode.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/mechstiff.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/imanm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/heatmapper.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/gnm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/gamma.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/functions.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/exgnm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/exanm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/essa.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/entropy.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/editing.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/compare.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/clustenm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/bbenm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/anm.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/analysis.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/adaptive.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics copying prody/dynamics/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/dynamics creating build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/pdbensemble.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/functions.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/ensemble.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/conformation.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble copying prody/ensemble/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/ensemble creating build/lib.linux-x86_64-cpython-311/prody/kdtree copying prody/kdtree/kdtree.py -> build/lib.linux-x86_64-cpython-311/prody/kdtree copying prody/kdtree/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/kdtree creating build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/transform.py -> build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/measure.py -> build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/contacts.py -> build/lib.linux-x86_64-cpython-311/prody/measure copying prody/measure/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/measure creating build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/wwpdb.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/stride.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/starfile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/pdbfile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/pdbclusters.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/localpdb.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/header.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/functions.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/emdfile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/dssp.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/compare.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/cifheader.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/ciffile.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/blastpdb.py -> build/lib.linux-x86_64-cpython-311/prody/proteins copying prody/proteins/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/proteins creating build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/sequence.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/plotting.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/msafile.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/msa.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/analysis.py -> build/lib.linux-x86_64-cpython-311/prody/sequence copying prody/sequence/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/sequence creating build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/trajfile.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/trajectory.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/trajbase.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/psffile.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/frame.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/dcdfile.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory copying prody/trajectory/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/trajectory creating build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/straw.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/norm.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/hic.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/functions.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/cluster.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin copying prody/chromatin/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/chromatin creating build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/pdbligands.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/functions.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/ccd.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/bird.py -> build/lib.linux-x86_64-cpython-311/prody/compounds copying prody/compounds/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/compounds creating build/lib.linux-x86_64-cpython-311/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> build/lib.linux-x86_64-cpython-311/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/domain_decomposition creating build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/settings.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/seqtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/pathtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/misctools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/logger.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/legacy.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/laptools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/eigtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/drawtools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/doctools.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/checkers.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/catchall.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/utilities copying prody/utilities/TreeConstruction.py -> build/lib.linux-x86_64-cpython-311/prody/utilities creating build/lib.linux-x86_64-cpython-311/prody/apps copying prody/apps/apptools.py -> build/lib.linux-x86_64-cpython-311/prody/apps copying prody/apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/apps creating build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps creating build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps creating build/lib.linux-x86_64-cpython-311/prody/tests copying prody/tests/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests creating build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps copying prody/tests/apps/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/apps creating build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_select.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic copying prody/tests/atomic/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/atomic creating build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles creating build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/dynamics creating build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/ensemble creating build/lib.linux-x86_64-cpython-311/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> build/lib.linux-x86_64-cpython-311/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/kdtree creating build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/test_transform.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/test_measure.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/test_contacts.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure copying prody/tests/measure/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/measure creating build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_header.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins copying prody/tests/proteins/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/proteins creating build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence copying prody/tests/sequence/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/sequence creating build/lib.linux-x86_64-cpython-311/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> build/lib.linux-x86_64-cpython-311/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> build/lib.linux-x86_64-cpython-311/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/trajectory creating build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities copying prody/tests/utilities/__init__.py -> build/lib.linux-x86_64-cpython-311/prody/tests/utilities creating build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> build/lib.linux-x86_64-cpython-311/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/prody creating build/temp.linux-x86_64-cpython-311/prody/dynamics gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/dynamics/rtbtools.c -o build/temp.linux-x86_64-cpython-311/prody/dynamics/rtbtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/prody/dynamics/rtbtools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/dynamics/rtbtools.cpython-311-x86_64-linux-gnu.so building 'prody.dynamics.smtools' extension gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/dynamics/smtools.c -o build/temp.linux-x86_64-cpython-311/prody/dynamics/smtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/prody/dynamics/smtools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/dynamics/smtools.cpython-311-x86_64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-x86_64-cpython-311/prody/sequence gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/msatools.c -o build/temp.linux-x86_64-cpython-311/prody/sequence/msatools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/prody/sequence/msatools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/sequence/msatools.cpython-311-x86_64-linux-gnu.so building 'prody.sequence.msaio' extension gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/msaio.c -o build/temp.linux-x86_64-cpython-311/prody/sequence/msaio.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/prody/sequence/msaio.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/sequence/msaio.cpython-311-x86_64-linux-gnu.so building 'prody.sequence.seqtools' extension gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/sequence/seqtools.c -o build/temp.linux-x86_64-cpython-311/prody/sequence/seqtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/prody/sequence/seqtools.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/sequence/seqtools.cpython-311-x86_64-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-x86_64-cpython-311/prody/kdtree gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/kdtree/KDTree.c -o build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTree.o gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTreemodule.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTree.o build/temp.linux-x86_64-cpython-311/prody/kdtree/KDTreemodule.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/kdtree/_CKDTree.cpython-311-x86_64-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-x86_64-cpython-311/prody/proteins creating build/temp.linux-x86_64-cpython-311/prody/proteins/ccealign gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -Iprody/utilities/tnt -I/usr/include/python3.11 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-x86_64-cpython-311/prody/proteins/ccealign/ccealignmodule.o g++ -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-cpython-311/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib64 -o build/lib.linux-x86_64-cpython-311/prody/proteins/ccealign.cpython-311-x86_64-linux-gnu.so + popd + RPM_EC=0 ~/build/BUILD/ProDy-2.3.1 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.z3wHsi + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64 ++ dirname /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.3.1 + pushd python3 ~/build/BUILD/ProDy-2.3.1/python3 ~/build/BUILD/ProDy-2.3.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64 --prefix /usr running install /usr/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running install_lib creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64 creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11 creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/test_checkers.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/test_misctools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-cpython-311/prody/tests/utilities/test_pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-cpython-311/prody/tests/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-cpython-311/prody/tests/trajectory/test_dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-cpython-311/prody/tests/trajectory/test_frame.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_analysis.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_msa.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_msafile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-cpython-311/prody/tests/sequence/test_sequence.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_dssp.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_header.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-cpython-311/prody/tests/proteins/test_wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/test_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/test_measure.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure copying build/lib.linux-x86_64-cpython-311/prody/tests/measure/test_transform.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree copying build/lib.linux-x86_64-cpython-311/prody/tests/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree copying build/lib.linux-x86_64-cpython-311/prody/tests/kdtree/test_kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_conformation.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_functions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-cpython-311/prody/tests/ensemble/test_pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_editing.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_enms.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_pca.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-cpython-311/prody/tests/dynamics/test_signature.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot.fasta -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot.slx -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot.sth -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/xmlSTI.xml -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/dcd2k39_truncated.dcd -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/anm1ubi_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/exanm2nwl_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pca2k39_cov.coo -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/rtb2gb1_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/rtb2gb1_project.coo -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/anm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/anm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/commute1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/exanm2nwl_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/exanm2nwl_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/gnm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/gnm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/hit1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot_di.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pca2k39_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pca2k39_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ejg.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1r19_dssp.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ubi.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb1ubi_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2k39_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2k39_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb2nwl-opm.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3hsy.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3mht.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3o21.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdb3p3w.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/pdbRTER.pdb -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-cpython-311/prody/tests/datafiles/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_atomic.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_atommap.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_fragment.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_hierview.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_select.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-cpython-311/prody/tests/atomic/test_subset.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_examples.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/apps/test_prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps copying build/lib.linux-x86_64-cpython-311/prody/tests/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_coevol.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_conserv.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_filter.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_merge.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_occupancy.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_rankorder.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_refine.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/evol_apps/evol_search.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/nmaoptions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_align.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_biomol.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_blast.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_eda.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_energy.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/prody_apps/prody_select.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-cpython-311/prody/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps copying build/lib.linux-x86_64-cpython-311/prody/apps/apptools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/datafiles copying build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles/mod_res_map.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/datafiles copying build/lib.linux-x86_64-cpython-311/prody/utilities/datafiles/saxs_water.dat -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/datafiles copying build/lib.linux-x86_64-cpython-311/prody/utilities/TreeConstruction.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/catchall.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/checkers.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/doctools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/drawtools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/eigtools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/laptools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/legacy.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/logger.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/misctools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/seqtools.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities copying build/lib.linux-x86_64-cpython-311/prody/utilities/settings.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition copying build/lib.linux-x86_64-cpython-311/prody/domain_decomposition/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition copying build/lib.linux-x86_64-cpython-311/prody/domain_decomposition/spectrus.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/bird.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/ccd.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/functions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds copying build/lib.linux-x86_64-cpython-311/prody/compounds/pdbligands.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/cluster.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/functions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/hic.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/norm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin copying build/lib.linux-x86_64-cpython-311/prody/chromatin/straw.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/frame.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/psffile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/trajbase.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/trajectory.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory copying build/lib.linux-x86_64-cpython-311/prody/trajectory/trajfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/seqtools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msaio.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msatools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msa.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/msafile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence copying build/lib.linux-x86_64-cpython-311/prody/sequence/sequence.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/ccealign.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/blastpdb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/cifheader.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/compare.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/dssp.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/emdfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/functions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/header.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/pdbclusters.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/starfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/stride.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins copying build/lib.linux-x86_64-cpython-311/prody/proteins/wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/contacts.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/measure.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure copying build/lib.linux-x86_64-cpython-311/prody/measure/transform.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree copying build/lib.linux-x86_64-cpython-311/prody/kdtree/_CKDTree.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree copying build/lib.linux-x86_64-cpython-311/prody/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree copying build/lib.linux-x86_64-cpython-311/prody/kdtree/kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/conformation.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/functions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble copying build/lib.linux-x86_64-cpython-311/prody/ensemble/pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/smtools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/rtbtools.cpython-311-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/adaptive.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/anm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/bbenm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/clustenm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/compare.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/editing.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/entropy.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/essa.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/exanm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/exgnm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/functions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/gamma.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/gnm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/heatmapper.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/imanm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/mechstiff.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/mode.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/modeset.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/nma.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/nmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/pca.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/perturb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/rtb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/sampling.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/signature.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics copying build/lib.linux-x86_64-cpython-311/prody/dynamics/vmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/cath.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/dali.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/goa.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/pfam.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/quartataweb.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database copying build/lib.linux-x86_64-cpython-311/prody/database/uniprot.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database creating /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/acceptor.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/angle.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atom.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atomgroup.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atomic.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/atommap.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/bond.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/chain.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/crossterm.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/dihedral.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/donor.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/fields.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/flags.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/functions.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/hierview.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/improper.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/nbexclusion.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/pointer.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/residue.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/segment.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/select.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/selection.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/atomic/subset.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic copying build/lib.linux-x86_64-cpython-311/prody/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_ciffile.py to test_ciffile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_header.py to test_header.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/test_measure.py to test_measure.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/measure/test_transform.py to test_transform.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_pca.py to test_pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/dynamics/test_signature.py to test_signature.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/datafiles/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_select.py to test_select.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_energy.py to prody_energy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/apps/apptools.py to apptools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/TreeConstruction.py to TreeConstruction.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/catchall.py to catchall.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/checkers.py to checkers.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/doctools.py to doctools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/drawtools.py to drawtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/eigtools.py to eigtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/laptools.py to laptools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/legacy.py to legacy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/logger.py to logger.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/misctools.py to misctools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/pathtools.py to pathtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/seqtools.py to seqtools.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/utilities/settings.py to settings.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/domain_decomposition/spectrus.py to spectrus.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/bird.py to bird.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/ccd.py to ccd.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/compounds/pdbligands.py to pdbligands.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/cluster.py to cluster.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/hic.py to hic.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/norm.py to norm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/chromatin/straw.py to straw.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/frame.py to frame.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/psffile.py to psffile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/trajbase.py to trajbase.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/trajectory.py to trajectory.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/trajectory/trajfile.py to trajfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/analysis.py to analysis.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msa.py to msa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msafile.py to msafile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/plotting.py to plotting.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/sequence.py to sequence.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/blastpdb.py to blastpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/ciffile.py to ciffile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/cifheader.py to cifheader.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/compare.py to compare.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/dssp.py to dssp.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/emdfile.py to emdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/header.py to header.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/localpdb.py to localpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/pdbfile.py to pdbfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/starfile.py to starfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/stride.py to stride.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/wwpdb.py to wwpdb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure/contacts.py to contacts.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure/measure.py to measure.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/measure/transform.py to transform.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree/kdtree.py to kdtree.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/conformation.py to conformation.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/ensemble.py to ensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/adaptive.py to adaptive.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/analysis.py to analysis.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/anm.py to anm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/bbenm.py to bbenm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/clustenm.py to clustenm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/compare.py to compare.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/editing.py to editing.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/entropy.py to entropy.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/essa.py to essa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/exanm.py to exanm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/exgnm.py to exgnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/gamma.py to gamma.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/gnm.py to gnm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/imanm.py to imanm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/mechstiff.py to mechstiff.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/mode.py to mode.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/modeset.py to modeset.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/nma.py to nma.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/pca.py to pca.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/perturb.py to perturb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/plotting.py to plotting.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/rtb.py to rtb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/sampling.py to sampling.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/signature.py to signature.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database/cath.py to cath.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database/dali.py to dali.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database/goa.py to goa.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database/pfam.py to pfam.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database/quartataweb.py to quartataweb.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/database/uniprot.py to uniprot.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/__init__.py to __init__.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/acceptor.py to acceptor.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/angle.py to angle.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atom.py to atom.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atomgroup.py to atomgroup.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atomic.py to atomic.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/atommap.py to atommap.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/bond.py to bond.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/chain.py to chain.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/crossterm.py to crossterm.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/dihedral.py to dihedral.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/donor.py to donor.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/fields.py to fields.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/flags.py to flags.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/functions.py to functions.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/hierview.py to hierview.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/improper.py to improper.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/nbexclusion.py to nbexclusion.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/pointer.py to pointer.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/residue.py to residue.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/segment.py to segment.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/select.py to select.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/selection.py to selection.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/atomic/subset.py to subset.cpython-311.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/__init__.py to __init__.cpython-311.pyc writing byte-compilation script '/tmp/tmpcy76aq77.py' /usr/bin/python3 /tmp/tmpcy76aq77.py removing /tmp/tmpcy76aq77.py running install_egg_info running egg_info creating ProDy.egg-info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt writing manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'pyproject.toml' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/ProDy-2.3.1-py3.11.egg-info running install_scripts Installing evol script to /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin Installing prody script to /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + rm -rfv /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin/__pycache__ + mkdir -p /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + rm -f /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin/evol /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin/prody + cd scripts + cp -pr ./prody ./python3.11-prody + cp -pr ./evol ./python3.11-evol + sed -i '1s=^#!/usr/bin/\(python\|env python\)[0-9.]*=#!/usr/bin/python3=' ./prody ./evol ./python3.11-prody ./python3.11-evol + for i in prody-3.11 + touch -r ./python3.11-prody prody-3.11 + install -p prody-3.11 /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + install -p ./prody /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + install -p ./python3.11-prody /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + ln -sf /usr/bin/python3.11-prody /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin/prody-3.11 + for i in evol-3.11 + touch -r ./python3.11-evol evol-3.11 + install -p evol-3.11 /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + install -p ./evol /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + install -p ./python3.11-evol /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin + ln -sf /usr/bin/python3.11-evol /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/bin/evol-3.11 + cd .. + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.3.1-1.fc38 --unique-debug-suffix -2.3.1-1.fc38.x86_64 --unique-debug-src-base ProDy-2.3.1-1.fc38.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/ProDy-2.3.1 extracting debug info from /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/rtbtools.cpython-311-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/dynamics/smtools.cpython-311-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/kdtree/_CKDTree.cpython-311-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/proteins/ccealign.cpython-311-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msaio.cpython-311-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/msatools.cpython-311-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11/site-packages/prody/sequence/seqtools.cpython-311-x86_64-linux-gnu.so original debug info size: 628kB, size after compression: 564kB /usr/bin/sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. 464 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib/debug/usr/lib64/python3.11 using python3.11 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/lib64/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: python3-ProDy-2.3.1-1.fc38.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.aLuHXq + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.3.1 + DOCDIR=/builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/share/doc/python3-ProDy + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/share/doc/python3-ProDy + cp -pr python3/README.rst /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/share/doc/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.7uWftS + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.3.1 + LICENSEDIR=/builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/share/licenses/python3-ProDy + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/share/licenses/python3-ProDy + cp -pr python3/LICENSE.rst /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64/usr/share/licenses/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 warning: absolute symlink: /usr/bin/evol-3.11 -> /usr/bin/python3.11-evol warning: absolute symlink: /usr/bin/prody-3.11 -> /usr/bin/python3.11-prody Provides: ProDy = 0:2.3.1-1.fc38 python-ProDy = 2.3.1-1.fc38 python3-ProDy = 2.3.1-1.fc38 python3-ProDy(x86-64) = 2.3.1-1.fc38 python3.11-ProDy = 2.3.1-1.fc38 python3.11dist(prody) = 2.3.1 python3dist(prody) = 2.3.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.11 python3.11dist(biopython) python3.11dist(numpy) >= 1.10 python3.11dist(pyparsing) python3.11dist(scipy) Obsoletes: python-ProDy < 2.3.1-1.fc38 Processing files: ProDy-debugsource-2.3.1-1.fc38.x86_64 Provides: ProDy-debugsource = 2.3.1-1.fc38 ProDy-debugsource(x86-64) = 2.3.1-1.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-ProDy-debuginfo-2.3.1-1.fc38.x86_64 Provides: debuginfo(build-id) = 1353977b14a7469052c72c248f2aa84f99fa0543 debuginfo(build-id) = 6c431ad9d4ecf417ca079a67d68e6574f8808871 debuginfo(build-id) = 78d6ae6de7b8826cb8b9823ed1ff3e2787daff5a debuginfo(build-id) = c178cdff9bf10a197675d6e2561c1b5a78858b3d debuginfo(build-id) = c20bd4e698dab1288485066f659b975d1447903a debuginfo(build-id) = d343e88285faed7f5db593a944034f507f36108d debuginfo(build-id) = f2ad46464de86777bc8a5078ecc7d9d70a7f9360 python-ProDy-debuginfo = 2.3.1-1.fc38 python3-ProDy-debuginfo = 2.3.1-1.fc38 python3-ProDy-debuginfo(x86-64) = 2.3.1-1.fc38 python3.11-ProDy-debuginfo = 2.3.1-1.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: ProDy-debugsource(x86-64) = 2.3.1-1.fc38 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64 Wrote: /builddir/build/RPMS/python3-ProDy-debuginfo-2.3.1-1.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/ProDy-debugsource-2.3.1-1.fc38.x86_64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-2.3.1-1.fc38.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.jRKGz3 + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.3.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/ProDy-2.3.1-1.fc38.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.qiIJDd + umask 022 + cd /builddir/build/BUILD + rm -rf ProDy-2.3.1 ProDy-2.3.1.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: absolute symlink: /usr/bin/evol-3.11 -> /usr/bin/python3.11-evol absolute symlink: /usr/bin/prody-3.11 -> /usr/bin/python3.11-prody Finish: rpmbuild ProDy-2.3.1-1.fc38.src.rpm Finish: build phase for ProDy-2.3.1-1.fc38.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1672220725.289605/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/ProDy-2.3.1-1.fc38.src.rpm) Config(child) 1 minutes 7 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool